Thermodesulfobacterium geofontis: TOPB45_0992
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Entry
TOPB45_0992 CDS
T01547
Name
(GenBank) DNA polymerase III, subunits gamma and tau
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
top
Thermodesulfobacterium geofontis
Pathway
top03030
DNA replication
top03430
Mismatch repair
top03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
top00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
TOPB45_0992
03430 Mismatch repair
TOPB45_0992
03440 Homologous recombination
TOPB45_0992
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
top03032
]
TOPB45_0992
03400 DNA repair and recombination proteins [BR:
top03400
]
TOPB45_0992
Enzymes [BR:
top01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
TOPB45_0992
DNA replication proteins [BR:
top03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
TOPB45_0992
DNA repair and recombination proteins [BR:
top03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
TOPB45_0992
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
AAA
DNA_pol3_gamma3
RuvB_N
AAA_22
AAA_30
Rad17
AAA_16
TIP49
AAA_14
AAA_5
AAA_assoc_2
TIP49_C
PIF1
AAA_7
Torsin
DNA_pol3_delta
AAA_18
ResIII
PEPCK_ATP
nSTAND3
AAA_19
SLFN-g3_helicase
Mg_chelatase
TsaE
Sigma54_activ_2
Glyco_tranf_2_5
Thymidylate_kin
DUF5906
T2SSE
SKI
VapE-like_dom
APS_kinase
Sigma54_activat
AAA_6
PTPlike_phytase
Motif
Other DBs
NCBI-ProteinID:
AEH23086
UniProt:
F8C5U7
LinkDB
All DBs
Position
978058..979557
Genome browser
AA seq
499 aa
AA seq
DB search
MSYLVLARRYRPQSFKEVIGQNHVIKTLTNALKHQKLSHALLFSGIKGTGKTTVARIIAK
ALNCQNLIDNYEPCNECSNCLEISKGIFVDVIEIDAASNRGIDQIRELIENLKFAPVKGK
VKVYIIDEAHMLTREASNALLKSLEEPPSHVYFILATTEPNKLLPTILSRCQRYDFKRLE
HPLIVKYLKEVCEKENYQIEEEALELIAKEAQGSLRDALSLLDQAMAYGSKTKEDIITAF
GWHETILVEEIASILLEKNLKKALEFAQRVYEQGIDLIYLMEKLTEFFRELLVMKAFPKE
SKIGFHTLGIRDLVLENELEDILLIFQSLVRDLEILRKSSYPQLQFELALLRICEYGKFV
PIKDLIEKLDQVTVNHFSFSISASTMQEHQEIKEKSWENFVKEIKKENLPLYGLVSSLPK
PEIKADEIFLKISSSLNIIESPYYKLLKEKIESYFNKPFRVEIEEKKRLTLEEVKERPEV
KAILKTLSAKIAYIQPLKE
NT seq
1500 nt
NT seq
+upstream
nt +downstream
nt
atgtcatatttagttttagcacgtcgttatcgtccacaaagttttaaagaagtaatagga
caaaatcatgtgataaaaactttaaccaatgcacttaaacatcaaaaactttctcatgcc
cttttattttcaggtataaaaggaactgggaaaactacagtagcaagaattattgctaaa
gctttaaattgtcaaaatcttatagataattacgaaccctgtaatgagtgttctaattgc
ttagaaattagcaaaggaatatttgtagatgttatagaaattgatgcagcttcaaatagg
ggaattgatcaaataagagaacttattgaaaatttaaaattcgctccagttaaaggaaaa
gtaaaagtttatataatagatgaagcacatatgctcaccagagaagcttctaatgctttg
ttaaaatctttggaagagccaccttcccatgtttattttatacttgcaactacagaacct
aacaaacttttacctaccattctttcaagatgccaaagatatgattttaaaagattggaa
catccattaatagttaaatatctgaaagaggtttgtgaaaaagaaaattatcaaatagaa
gaagaggctttagaacttattgctaaagaagcacaaggaagtttaagagatgccctttcc
ttgcttgatcaggcaatggcatacggaagtaaaactaaagaagatataatcacagctttt
ggttggcatgagactatattagtggaagaaatcgcaagtattcttttagaaaaaaatctt
aaaaaagctttagaatttgctcaaagagtttatgaacaaggaatagatttaatatatcta
atggaaaaattaacagaatttttcagagaacttttagttatgaaagcatttcctaaggaa
agtaaaataggattccatactcttggaattagagatcttgtcctcgaaaatgaacttgaa
gatatcttgttaatatttcaaagtttagtaagagatctcgaaatattaagaaaaagtagt
tatcctcagcttcaatttgaacttgccctgcttagaatttgcgaatatgggaaatttgtt
cctataaaagatctaatagaaaaacttgatcaagtaacagttaatcatttttctttttct
atttctgcttcgactatgcaagaacatcaggaaataaaagaaaaaagttgggaaaatttt
gtaaaagaaattaaaaaagaaaatttacctctttatgggttggtaagcagtttaccaaag
cctgaaataaaagcagatgaaatatttttaaaaataagctcatctttaaatatcattgag
tctccttattataagcttttaaaagaaaaaatagaaagctactttaataaaccttttaga
gttgaaatagaagagaaaaagagacttactttagaagaggtaaaagaaagacctgaagta
aaggcaattttaaaaactttatcagctaaaatagcttatatacaacctttaaaggagtaa
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