Thermodesulfobacterium geofontis: TOPB45_0994
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Entry
TOPB45_0994 CDS
T01547
Name
(GenBank) Recombination protein recR
KO
K06187
recombination protein RecR
Organism
top
Thermodesulfobacterium geofontis
Pathway
top03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
top00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
TOPB45_0994
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
top03400
]
TOPB45_0994
DNA repair and recombination proteins [BR:
top03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
TOPB45_0994
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
TOPB45_0994
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Toprim_4
RecR_HhH
RecR_ZnF
Toprim
RecR_C
HHH_5
HHH
Motif
Other DBs
NCBI-ProteinID:
AEH23088
UniProt:
F8C5U9
LinkDB
All DBs
Position
979904..980512
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AA seq
202 aa
AA seq
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MSGVYPYTFKKLIETISQLPGLGEKSATRISFFLLSKPELCEILGELIKELPYKVKLCKF
CRNLSEEEICSICKDEKRNSELLCIVENPVSLSYIEETGVFNGYYFVLHYLLSPKDGIGP
KELGLDHMLYLIKLRNIREIIIALSPTLSGEATTSYILEVLKDYPVKVTKIACGIPMGME
IQFVDPLTLKKALFGREILKEK
NT seq
609 nt
NT seq
+upstream
nt +downstream
nt
atgtctggagtatatccttatacttttaaaaaacttatagaaacaatttcacaacttccc
ggattaggagaaaaaagtgctacaagaatttctttttttcttttatctaaacctgaactt
tgtgaaatcttaggagagcttattaaagaattgccttataaagttaagttatgtaaattt
tgtagaaatctatctgaagaagaaatttgttccatttgtaaagatgaaaaaagaaattca
gaacttctttgtattgttgaaaatcctgttagtctttcttatatagaagaaaccggagtt
tttaatggatattattttgttttgcactatcttttatcccctaaggatggtataggacca
aaagaactgggacttgatcatatgctttatcttataaaattaagaaatataagagaaata
atcatagccctttctcccactctttcaggagaagcaaccacctcttatattcttgaagtc
ttaaaagattatccagttaaagtaactaaaatcgcttgtggtatcccaatggggatggaa
attcaatttgtagatcccttaactcttaaaaaagcactttttgggagagaaattttaaag
gaaaaatga
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