KEGG   Thermoanaerobacter pseudethanolicus: Teth39_0475Help
Entry
Teth39_0475       CDS       T00649                                 

Definition
(GenBank) ATP dependent DNA ligase
  KO
K01971  
bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
Organism
tpd  Thermoanaerobacter pseudethanolicus
Pathway
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:tpd00001]
 Genetic Information Processing
  Replication and repair
   03450 Non-homologous end-joining
    Teth39_0475
Enzymes [BR:tpd01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     Teth39_0475
DNA repair and recombination proteins [BR:tpd03400]
 Prokaryotic Type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    Two-component NHEJ DNA repair complex
     Teth39_0475
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif Motif
Other DBs
NCBI-ProteinID: 
JGI: 
UniProt: 
LinkDB All DBs
Position
complement(501606..502529)
Genome map
AA seq 307 aa AA seqDB search
MSMIEEKISPMLASSSDPFDSPEWIYEIKWDGSRTIAFLSNKTRLQDRRLVDITHQFPDL
ALLYKQIKAKEAILDGELVVLKNGKPSYKSIMSRKHQQNLVKINLLSKIMPVIFITWDIL
YLNGKSLVELPLIERKDILRKTVKENEIIKISDFIFEHGKMLFEETGKKGLEGIVAKKAD
SKYLIGKRSKLWLKSKHFIVINAVIIGYRTDKTALILGLYDEENNLINIGSCESGLSQKE
LKAFYEVAKEIKAPDNYYNFKEKNVQWLKPLLTCKVRFMEWSENMKMRAPSFIQFEYNVK
PEECRFE
NT seq 924 nt NT seq  +upstreamnt  +downstreamnt
atgtctatgatagaagaaaaaatatcacctatgctggcatccagcagtgacccttttgat
agccccgaatggatatatgaaatcaaatgggatggttcaaggactattgcctttctttca
aataaaacaagacttcaagatagaaggcttgttgatataacccaccagtttccggatttg
gcattactttataagcaaataaaagcaaaagaagcaatacttgacggtgaacttgtagtt
ttaaaaaacggcaagcccagttacaaaagcattatgtcgagaaagcatcaacaaaattta
gtaaaaataaatcttttaagcaagataatgcccgtaattttcataacatgggatatatta
tacttaaacggcaagtctcttgtagaattgccacttatagagagaaaagatatccttaga
aaaacagttaaagaaaatgagatcataaaaatatcagattttatatttgaacatggaaaa
atgctttttgaagagacagggaaaaaaggacttgaaggaattgttgccaaaaaagcagat
tcaaaatatttaataggaaaaaggagtaaactctggcttaagtcaaaacattttattgta
ataaatgctgttattatagggtacagaactgacaaaacagccctcatactggggctttac
gatgaggaaaataatttaataaacataggaagttgtgaatcaggcctatcccagaaggaa
ttaaaagcattctatgaagttgccaaggagataaaagccccagataattattataacttt
aaagaaaaaaatgtgcagtggttaaaacccttgctaacatgtaaagtgagatttatggaa
tggtctgaaaacatgaagatgagggcaccttcttttattcaatttgagtataacgtaaaa
ccagaagagtgcaggtttgaataa

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