KEGG   Thermofilum pendens: Tpen_1358
Entry
Tpen_1358         CDS       T00446                                 
Name
(GenBank) transcriptional regulator, TrmB
  KO
K07725  CRISPR-associated protein Csa3
Organism
tpe  Thermofilum pendens
Brite
KEGG Orthology (KO) [BR:tpe00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:tpe03000]
    Tpen_1358
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:tpe02048]
    Tpen_1358
Transcription factors [BR:tpe03000]
 Prokaryotic type
  Helix-turn-helix
   Other families
    Tpen_1358
Prokaryotic defense system [BR:tpe02048]
 CRISPR-Cas system
  Type I CRISPR-Cas system
   Subtype I-A factors
    Tpen_1358
SSDB
Motif
Pfam: HTH_IclR MarR_2 HTH_5 MarR HTH_24 TrmB HTH_Crp_2 HTH_29 HemN_C HTH_45 Fe_dep_repress HTH_20 DUF5669 HTH_23 HTH_38 HTH_11 DUF2250
Other DBs
NCBI-ProteinID: ABL78755
UniProt: A1RZX5
LinkDB
Position
complement(1312213..1312920)
AA seq 235 aa
MTLGAPTARLFRGRGGAIRVIDALVLTLGFEPGPLISAVASAASEGLAEGARVVVLTAGF
PDERAERAWLEFQRVVGMMGLARRPGFSVEKREVPLDDFVAAVINVKSLFRGLEDKRVRI
SITGGMRALGIAVLTAYLLTRWRVDPEVEVYLEGQGRALRLPRLSRVLGVGVPEAWLEVL
SALEKSGPLGASDLGGLLGKDRSTVFRYLKRMEEAGLVRQVDGGYVATDLGRLLL
NT seq 708 nt   +upstreamnt  +downstreamnt
atgacactaggggcgccgaccgcgaggttatttagggggcggggcggggctatacgcgtg
atcgatgcactggtgttgacgctgggcttcgagccggggcccctgataagcgctgttgcc
tcggcggcgtcggaggggctggcggagggcgctagggtggtggtgctgaccgctggcttc
ccggacgagagggctgagcgcgcgtggctggagttccagcgcgtagtcggcatgatgggc
ttggcgaggaggccgggcttctccgtggagaagagggaggtcccgctcgacgacttcgtt
gcagcagttatcaacgtgaagtccttgttcagggggctcgaggacaaaagggtgaggatc
tcgattacgggcggcatgagggcgctgggcatcgcggttctgacggcctacttgctcacc
aggtggagggttgaccccgaggtcgaggtgtacctggaggggcaggggagggccttgcgg
ttgccgcgcctctcgagggtgctgggggtaggcgtccccgaggcctggctcgaggtgctc
tcagccctggagaagagcggccccttaggcgcaagcgacctcggcgggttgctgggcaag
gataggagcaccgtgttcaggtacctgaagaggatggaggaagcggggctcgtgaggcaa
gtcgatggcggctacgtcgcgacggacctcggaaggctcctcctgtga

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