KEGG   Thermococcus peptonophilus: A0127_04830Help
Entry
A0127_04830       CDS       T04728                                 

Definition
(GenBank) DNA ligase
  KO
K10747  
DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7]
Organism
tpep  Thermococcus peptonophilus
Pathway
DNA replication
Base excision repair
Nucleotide excision repair
Mismatch repair
Brite
KEGG Orthology (KO) [BR:tpep00001]
 Genetic Information Processing
  Replication and repair
   03030 DNA replication
    A0127_04830
   03410 Base excision repair
    A0127_04830
   03420 Nucleotide excision repair
    A0127_04830
   03430 Mismatch repair
    A0127_04830
Enzymes [BR:tpep01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     A0127_04830
    6.5.1.6  DNA ligase (ATP or NAD+)
     A0127_04830
    6.5.1.7  DNA ligase (ATP, ADP or GTP)
     A0127_04830
DNA replication proteins [BR:tpep03032]
 Eukaryotic Type
  DNA Replication Elongation Factors
   Other elongation factors
    A0127_04830
 Prokaryotic Type
   Elongation factors (archaeal)
    Other elongation factors
     A0127_04830
DNA repair and recombination proteins [BR:tpep03400]
 Eukaryotic Type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     A0127_04830
   NER (nucleotide excision repair)
    Other NER factors
     A0127_04830
   MMR (mismatch exicision repair)
    Other MMR factors
     A0127_04830
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif Motif
Other DBs
NCBI-ProteinID: 
UniProt: 
LinkDB All DBs
Position
901520..903199
Genome map
AA seq 559 aa AA seqDB search
MRYSELADLYRRLEKTTLKTLKTKFVADFLKKTPDDLLEIVPYLILGKVFPDWDERELGV
GEKLLIKAVSMATGVPEKEIEDSIRDTGDLGESVALAIKKKKQKSFFSQPLTIKRVYDTF
VKIAEAQGEGSQDRKMKYLANLFMDAQPEEGKYIARTVLGTMRTGVAEGLLRDAIAEAFK
VKPELVERAYMLTSDFGYVAKIAKLEGNEGLSEVRIQIGKPIRPMLAQNAASVKDALIEM
GGEAAFEIKYDGARVQVHKDGDKVIVYSRRLENVTRSIPEVVEAIKAAVKPKKAIVEGEL
VAVGEGGKPRPFQYVLRRFRRKYNIDEMIEKIPLELNLFDVMFVDGESLIETKFIDRRKK
LEEIVEESEKVKLAEQLITKKVEEAEAFYKRALELGHEGVMAKRLDAVYEPGNRGKKWLK
VKPTMENLDLVIIGAEWGEGRRAHLLGSFLVAAYDPHSGEFVPVGKVGSGFTDEDLIEFT
KMLKPYIVRQEGKFVEIEPKFVIEVTYQEIQKSPKYKSGFALRFPRYVALREDKSPEEAD
TIERVAELYELQEKFKAKK
NT seq 1680 nt NT seq  +upstreamnt  +downstreamnt
atgcgctactctgaactggccgacctctacaggcggctcgaaaagaccacactgaagacc
ctgaagacgaagttcgttgccgattttctgaagaagaccccggacgacctccttgagata
gttccatacttgatccttgggaaggtctttccggactgggacgagagggagctcggcgta
ggagagaagctcctaataaaagcagtttcaatggcaacgggagtccctgaaaaagaaata
gaagactccataagggacacgggcgacctcggcgagagtgtagcccttgccatcaagaaa
aagaagcagaagagcttcttctcacagccgctgacaataaaacgtgtctatgataccttc
gtcaaaatagctgaagcccagggcgagggcagccaagacaggaagatgaagtatctggcg
aacctcttcatggacgctcaacctgaggaggggaagtatatagcgagaaccgttcttgga
acgatgaggaccggcgttgccgaaggactgcttagggacgcgatagccgaggcattcaag
gtgaagcccgagttagttgagagggcctacatgctaacgagcgacttcggctacgtagcc
aaaatagccaagctcgaaggcaacgaggggctctcagaggttaggatacagataggaaag
ccgataaggccgatgctggcccagaacgcggcgagcgttaaggatgccctcattgagatg
ggtggcgaggccgcctttgagataaagtacgacggagcgagagttcaggttcacaaggac
ggagataaggtcatagtatattctaggagacttgaaaacgtcacgaggtcaattccagaa
gttgtggaggcaataaaagctgccgttaaaccgaaaaaggccatagtcgagggagagctt
gttgcagtgggtgaaggcggaaagccaaggcccttccagtatgtgctgaggcgctttagg
aggaagtacaacatagacgagatgatcgaaaagattccgctcgagctgaacctcttcgat
gtaatgttcgtcgacggcgagagtctgatagagacgaagttcattgacaggagaaagaag
cttgaagagattgttgaggaaagtgaaaaagtaaagctcgcagaacagctgataaccaag
aaggtcgaagaagcggaggccttctacaagagggcccttgagctgggccatgaaggagtc
atggcaaagaggctcgatgccgtctacgagcccggaaaccgcggaaagaagtggctcaag
gtcaaacccacgatggaaaacctcgaccttgtaatcatcggtgcggagtggggcgaaggc
aggagggcgcacctactcggctcgttcctcgtggctgcttatgacccgcacagcggagag
tttgttccggttggaaaggttgggagcggcttcacagacgaggatctgatcgagttcacc
aagatgctcaagccctacatagtacgccaggagggcaagttcgtggagatagagccgaag
ttcgtcatagaggtcacctaccaggagatacagaagagcccgaagtacaagagcggcttc
gccctgaggttcccgcgctacgtcgctcttagggaagataaaagccccgaggaggccgat
acaatagagagggtagcggagctctacgagctccaggaaaaatttaaggcgaagaagtga

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