Thalassiosira pseudonana: THAPSDRAFT_2465
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Entry
THAPSDRAFT_2465 CDS
T01078
Name
(RefSeq) predicted protein
Organism
tps
Thalassiosira pseudonana
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AATase
PapA_C
HNH_repeat
Motif
Other DBs
NCBI-GeneID:
7450359
NCBI-ProteinID:
XP_002287837
JGI:
2465
UniProt:
B8BUF6
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Position
2:complement(1067209..1070634)
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AA seq
1029 aa
AA seq
DB search
MSMKQTTSNALAFIWLCAILDVEAFSPSSPTTSSASARWMPSSSSSPLHIHKSRHNTLFA
TSNELFFADAIAQQESTSVNDITSQTVSKKSEGRRALGSQELLMLPRQYRPKLNEGLPPF
PSMSHVQVTVLSSTPSVDAISKAIDIAMGTHPMLRCHVEGDGEPDERIDLFQMVRKGEPN
PCTFVAPETTPFTSKDVLRVVDVSGSDMASLEASWKTNFAKDIDDGSWYEISSKGPLWRM
TMHRLGDGGDDSPCALVFSANHAISDQGSVNVLMDQLLADIVSIEHSGKVSNKAVVQEVP
MAMEDSVLGTNNRWSDVHTSGLSPGTVKYVLDKAAEGLKSPVILPDSNGNAGGGDSVLGA
VSTIMGKSAGGESEASSERKTVLQFRSLPTETTSALLEACRANGVSITNALIAATTLAST
DFIDGGDSKPGKERNYKVLQSLDMRRFGAQLDKCDTVACMAGSNDLMFGPLKDNSGEVFC
NLPESSDSQDMFWGLAKEGRDQTKQFVDSNGPVHAVRVFDFAMTISDMNNLVDLTVKSKD
SQGRAYSAGLSNVGVYERQKAVKRENGGERENIQVKHGKYEVLDVFFGTPHARTGCLYIV
SAITVNGSMKLTFHPASPIVSEETNKQFADDFVGILEKAATTKAVKEGNSGNPLFSQLNI
PEGTLSLAAAGLGLVGLVVHAGAWSEFFFNIAEMKANVADPKDFWDAVNFWIFFAVGHPL
LQPILWISDVLHGSPGPIVFDLVPASFLMANILFIGATAWSKEFRNALNIAALSAFLTYV
GAGLDGQAGLGDFNLQLNDRYQGQVVKGCPAYDQVRQPSMDDFDLEKYQGRWYEQKFHDW
TQFKEVYDTTLDIKLTPDKKGWTDDFGVKGPAPDSAKLSWDKSPVANGAHYFMFGRVADE
DPPGILRESGFGVEFPNYIVDVKKDPATGEYTEAIQFQCLERGGVRVFEGINFMSRKPVM
SDEEMKGMHQRAKAAGMNPYGAAEEQMHTVARRGADEPKIDNSWQQMWHAIGVDKLLELL
AESIEDGGR
NT seq
3090 nt
NT seq
+upstream
nt +downstream
nt
atgagcatgaagcaaactacatctaatgcactcgcgttcatatggctttgcgccatactt
gacgtcgaagccttctctccgtcctccccgacaacatcgtcggcatctgcaagatggatg
ccctcgtcatcgtcgtcacccctacacatacacaaatcacgccacaacactttgtttgct
acatccaatgaactctttttcgccgacgccatcgctcagcaagaatctaccagtgtaaat
gatattacatcgcaaactgtgtcaaagaagagtgaaggacgtcgtgcacttggatcgcaa
gaacttctcatgcttccacgtcagtaccgtcccaaactcaatgaagggcttcctcccttt
ccaagcatgtctcacgttcaggtgaccgtgttatcatctactccatcagtagatgctatc
tctaaagctattgatattgcaatgggtacacatcctatgctacgatgccacgtcgaagga
gatggtgaacctgatgagcgtattgatctgtttcaaatggttcgcaaaggagaacccaat
ccttgtacctttgttgcgcctgaaacaacaccctttacgagtaaggatgtgttgcgagtg
gtggatgtgtctgggtcggatatggcatcattggaagccagttggaagacaaactttgca
aaagatattgacgacggatcgtggtacgaaatttcaagtaaggggccattgtggaggatg
acgatgcatcgcttgggtgatggaggagacgatagtccgtgtgcactcgtgttctctgca
aatcacgctatctctgaccaaggatcagtcaatgttctcatggatcagttactggcggat
atcgtatccattgaacatagtggtaaagtctccaacaaggcagttgttcaagaagtacca
atggcaatggaagattcagtactgggaacaaacaatcgttggtctgatgtgcatacttct
ggattgtcacctgggactgtcaaatatgtactcgacaaagctgccgagggcctcaaaagc
cctgtaattttgcccgactctaatggaaacgctggtggcggagacagcgttcttggagcc
gtcagtacaatcatgggcaaaagtgcaggaggagaaagcgaagcaagttcagaacgaaag
actgtcttgcaattccgatccttaccaacggagaccacgtcggcattgttggaagcttgc
agagctaacggagtatcaatcaccaatgctctcattgctgcaaccacattggcatccact
gatttcattgacgggggagattcaaagccaggaaaagagcgaaactacaaagtactgcaa
tcgttggatatgaggcgttttggggcacagttggataaatgcgacaccgtggcgtgcatg
gccggaagcaacgatctcatgtttgggccgttgaaagataactccggagaagtattttgc
aatttgccagagtcaagtgatagccaagacatgttctggggtctggctaaggaaggaagg
gatcaaaccaaacaattcgtagattcaaatggacctgttcatgcagttcgtgtctttgac
tttgcgatgacaatttcagacatgaataatctcgtagacttgacggtgaagagtaaagac
tcacaaggccgcgcatacagtgcgggtctttccaacgtgggtgtttacgaaaggcaaaag
gcagtcaagagggagaacggcggggaacgagagaacattcaggtgaagcatggcaaatac
gaagttcttgatgtcttctttggaactcctcatgctcgtacgggatgcctttacattgtg
tcagcgataacagtcaacggatccatgaagctgacgttccatcctgcatcaccaattgtt
agtgaagagacaaataaacaatttgcagatgactttgtgggcatcttggagaaagcagca
acgaccaaagctgttaaagaaggaaactctggcaatcctctcttctctcaactcaatatt
ccagagggaacactgagcctcgctgctgctggactaggtctcgtcgggttagtagttcac
gccggagcatggtcagagttcttctttaacattgctgaaatgaaagcaaatgttgcagat
cccaaggatttctgggacgccgttaacttttggattttctttgccgttggacatccattg
ttgcagccgatcttgtggatctctgacgttcttcatggatctcctggacctatagtcttt
gatttggttccagcctcgttcctcatggcaaatatcttgtttattggagcaaccgcttgg
tcaaaagagttccgtaatgcgttgaatatcgctgctctttcggcgttcctcacttatgtt
ggagctggtcttgacggccaagcaggccttggagacttcaatctgcaactgaatgatcgc
taccaaggacaggttgtcaaaggctgtccagcttatgaccaagttcgtcaaccaagtatg
gatgactttgaccttgaaaagtatcaaggcaggtggtacgagcaaaagtttcatgactgg
actcagttcaaggaggtctacgacactacacttgatattaagctcacgccagacaagaag
ggatggacagacgactttggagtcaaaggacccgctcccgattctgcgaagctttcgtgg
gacaagtctcctgttgcaaatggagctcattactttatgtttggaagagtagcagacgag
gatcctcctggtatcctacgtgagtctggatttggtgttgaattcccaaattatattgtc
gatgtaaagaaagatcctgcaacaggagagtacaccgaggcgattcaattccaatgtctt
gaacgtggaggtgtacgagtcttcgaaggaatcaacttcatgagcagaaagcctgtcatg
tctgacgaggaaatgaaaggcatgcatcaacgtgccaaggctgctggtatgaatccctac
ggagcagcagaggaacagatgcacacagtggcaagaagaggagcagacgaaccaaagata
gacaacagctggcaacaaatgtggcatgccattggcgttgacaagctcctggagctactg
gctgagtcaatcgaagacggagggagataa
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