Thalassiosira pseudonana: THAPSDRAFT_25844
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Entry
THAPSDRAFT_25844 CDS
T01078
Name
(RefSeq) predicted protein
Organism
tps
Thalassiosira pseudonana
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF1349
Motif
Other DBs
NCBI-GeneID:
7448879
NCBI-ProteinID:
XP_002295154
JGI:
25844
UniProt:
B8CGA4
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Position
23:225833..229048
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AA seq
1002 aa
AA seq
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MRPSTFALVSLTLKELSHLTNAQTCSGIQGPFSFQFAGSCNYDTILEEYTRQVFDAAGNL
PGTCGSVVGGETSTGLTAKDDLDAKLAGTSVEEICNAAYDSAEVTKFHNAARQGTDYHFE
QMFYNGRSHWQEEVETLYESVDGTATSILKQDAKAVDDFYRADGTHGRVEWPNMLTNFDD
ATCTMNAAMCCWPKERQANDNNGNCAKPYDLNCVDKDPADNTDLCYVDMEDGSASNEFGG
DGFAVFPGDNNGGEGAIHCHGFAWANDEYDSISRYKANNLFYVSMYDHMYQRGYVENIPG
APMCGCLDQMPIVSRSDCTQVDLEEEFKLVFDGTDFAATLIKSEIDFNACRGINNRNNDL
WLPPFAHITFTITSSLRQAYSARLYEEGRMTNEQFGQVGRTITDNGCDHAVAYEQEKKGL
TTGFMYDLDAWTKVAGRDALKEAEPFGREAFNAALFKYSLTAPSDLATETLDNTPILMRV
CATCTKTHKKIYYRRLTPIDNEKFDLLDNLIYQRNNGGGDNVWNVDFTMHSTYEDALTGV
NPWKCPGDAYNYGDGFPGQCSPTGARVKDQDSIFNWLDNTKTDVAWFVNKPADVGVQDLI
DNPNTRSDGFYADIDIGDVNIEGNTLEHNGVYHITASGKDIWNQADTFHYHSQPGFGDVD
VSAHLSSFANIRNQHAKAGIMLRADHDDNSEYIFALMTGSRGLYLQGRSSKGNYAKTYGS
NYATNPVQTAAWLRLVKKMDLVEMYRSDDGVEWTLHASANIFFPNDTFRIGLAVTSHDNR
YLSEATFEDYQINEYFFPTSSPSISSAPTVWEPAVDVGDVQRAGSITEPNADGVARVYGS
GTGTWGHNDAFFFHNVQKSVGGALEVTVHVNNFSYHYQYGKGGIMIRDSNDPDAANAFIA
IAGRNQGVVFQSREEAGSPTTHHSFDWIQNNDVWLKLTKEADSSVVTASYKHSSDTEWTV
AGATSLMLTGETVQVGLAVTAGDAYQHALAQLDYKEYDVVES
NT seq
3009 nt
NT seq
+upstream
nt +downstream
nt
atgagaccctccacctttgctctcgtttcactcacactcaaagagctcagccacctcacc
aacgctcaaacatgctcaggaatccagggtcccttctccttccaattcgctggttcatgt
aactacgatacgattcttgaagagtacactcgccaagtctttgatgccgccggcaacttg
cccggaacatgtggcagtgtcgtcggcggtgagacatccactggattaacagccaaggat
gatttggatgccaagttggctggcactagcgtagaggagatttgcaacgccgcctatgat
tctgcagaggtgaccaagtttcataatgcggcgaggcaagggacggattatcactttgag
caaatgttttacaacggacgttcgcactggcaggaggaggttgagacgttgtacgaatcg
gtggatggaactgccactagcattctcaagcaggacgccaaggctgtggatgatttctac
cgtgctgatggcacccatggacgtgtcgagtggccaaacatgttgaccaactttgatgat
gctacttgtacgatgaacgctgccatgtgttgttggcccaaggaacgtcaagccaatgac
aacaacggaaactgtgccaagccatacgatctcaactgtgtggataaggatcctgccgat
aacactgacttgtgctatgtcgacatggaggatggatctgcctccaacgaatttggtggt
gatggttttgccgtctttcccggtgataacaacggtggagaaggagctattcactgtcac
ggatttgcttgggcaaacgacgagtacgattccatctctcgttacaaagccaacaatctc
ttctacgtctccatgtacgatcacatgtaccaacgtggatatgtggagaacatccctggt
gcacccatgtgtggttgtttggaccaaatgcccatcgttagtcggtctgattgcactcaa
gtggatttggaggaagagttcaagttagtctttgatggcactgactttgctgctactcta
atcaagtccgagattgatttcaatgcttgccgtggtatcaacaaccgtaacaatgatctt
tggttaccaccctttgctcacattaccttcacaatcacctcctctcttcgacaggcatac
tcggctcgtctctacgaggaagggcgcatgaccaacgagcagttcggccaggtcggaagg
accatcactgacaatggatgtgatcatgccgtcgcctacgaacaagagaagaagggtctt
actactggatttatgtacgacttagatgcatggaccaaagttgctggacgcgatgctctc
aaggaagctgagccgtttggtcgggaagcattcaacgctgctctcttcaagtacagtctc
accgctccttccgaccttgccaccgagactcttgacaacactcctatcctgatgagagtg
tgtgctacttgtaccaagacacacaagaagatctactaccgccgcttgactcccattgac
aacgagaagtttgaccttttggacaatctcatctatcaacgaaacaatggtggaggagac
aatgtatggaacgtggactttacgatgcattccacctacgaagatgctcttactggtgtc
aacccttggaagtgccccggagatgcctacaactacggcgatggcttccccggacagtgc
tcgccaactggtgcaagagtcaaggatcaagatagtatcttcaactggttggacaacacc
aagacagacgtggcatggttcgtcaacaagcctgctgatgtcggtgttcaagatctgatt
gacaaccccaacactcgaagtgacggcttctatgccgacattgatattggagacgtcaat
attgaaggaaacactcttgagcacaacggagtataccacattactgcttcgggaaaagat
atttggaatcaagctgatactttccattaccactcacagcctggatttggagatgttgat
gtatctgcccacctctcaagttttgcaaacatccgtaaccaacacgccaaggctggtatc
atgctccgagccgaccacgatgacaattcagagtatatctttgcactaatgaccggaagc
agaggactctacttgcaaggtcgatcctccaagggcaactatgcaaaaacgtacggcagc
aactatgcaactaaccctgttcagacagccgcttggctcaggcttgtcaagaagatggat
ttggttgagatgtaccgatccgacgatggagtcgagtggactcttcacgccagtgccaac
atcttcttccccaacgataccttccgcatcggactcgccgtcacgtctcatgacaatcgc
tacttgtccgaggcaacctttgaggactaccagatcaacgagtacttctttccaacttcc
tcaccatccatctcaagtgcaccaactgtttgggagcccgctgttgacgttggggacgtt
cagcgtgctggaagtatcactgaaccgaacgcagacggggttgctcgtgtctacggatca
ggaactggaacttggggtcataatgatgcgttcttcttccacaacgtgcaaaagagtgtg
ggtggagcattggaagttaccgttcacgtgaacaacttcagctatcactaccagtatggc
aagggaggaatcatgattcgcgatagcaacgatccagatgctgctaatgcctttattgcg
atagccggtcgtaatcagggtgttgtcttccaatctcgagaggaagcaggttctcctacg
acacatcactcctttgactggatccagaacaatgatgtttggctcaaacttaccaaggag
gcagactccagcgttgttactgcttcgtacaagcacagctcggatactgagtggactgtt
gccggcgctacgtcattaatgcttacgggagagacggttcaggttggtcttgctgttacc
gctggcgatgcctaccaacatgctcttgctcaattggattataaggaatacgatgttgtc
gagtcgtaa
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