KEGG   Thalassiosira pseudonana: THAPS_263240
Entry
THAPS_263240      CDS       T01078                                 
Name
(RefSeq) ATP-dependent helicase
  KO
K20098  DNA excision repair protein ERCC-6-like 2 [EC:5.6.2.-]
Organism
tps  Thalassiosira pseudonana
Brite
KEGG Orthology (KO) [BR:tps00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:tps03400]
    THAPS_263240
DNA repair and recombination proteins [BR:tps03400]
 Eukaryotic type
  Other factors with a suspected DNA repair function
   Helicases
    THAPS_263240
SSDB
Motif
Pfam: SNF2-rel_dom Helicase_C HDA2-3 ResIII Helicase_C_2 ERCC3_RAD25_C AceK_kinase DEAD SP_0191-like
Other DBs
NCBI-GeneID: 7447128
NCBI-ProteinID: XP_002295912
JGI: 263240
UniProt: B5YNH0
LinkDB
Position
7:1401015..1404826
AA seq 841 aa
IPASINRYLQGYQRVGSQFMYSSVIRGVGCVLGDDMGLGKTVQVISLVAALLEKTGTGED
IERMIREMLMGGVQKKDVVDPLDGITVPNFAPILIVVPSSVIDVRGYFNVGVYRGGNREK
AIDDVREGNNFILITGKSLFTRESDYSYFAGIKWKLVIIDEFHEYKNHKSNAFKCLEGVR
DSEPFPPLIGLTGTLMQNNHDELFTLIDLVRPGILEDRKSFMDGTSKPIMRARAKGASGE
TLSLGKQREAELKKALENVYLERRKDVVLKDTLTEKDEKVIFCELSEVQKKLYRRIISLP
DYYMLSTANAPCDCGVNQAYFRGYSKLKTQQEKINYQVTELCNEFVCCYKLYKVCSHASL
LQVDKSLSDSEIHKKLEFAKAAFTPEILREMPGQSYYKSDGIMNDHLNLSGKMKTLDYCL
RKYQKKRHRVLVFSYSTATLDLIQQHVKTQGWTHLRLDGQTATSTRQALVDQFQRDQAIF
VFLISTRAGGLGLNLTAANKVIIFDVNWNPSYDEQAQDRSFRIGQEKNVEVLRLVARGTI
EEQMYARQVYKTQLKKQTLGFNDDGKNQPQSFRGVDRDKHRKGELFGLENLLKFKDGSFM
ELLIVRFNEDDLENAVEEDGFEEDETRQATKFEQEESDDDDDAEMKKNGYKHEDFFNENQ
AKAEVDEESEEELGGESQMIQVMTSIACQGMNEDESSYTDEGSVLTSPPDKKPPSKPIAE
DDVIDLAGPSPVKTANKDEADMVDKTNATPDVAKSNGKTESPNSPYSPLKTQQPATQSQQ
PETVASSQAAAASSTSTASKAKTPPPVSLMGVVLGKSKKKKAEPANKNKAGGLYIPAYAR
G
NT seq 2522 nt   +upstreamnt  +downstreamnt
attcctgcgtctatcaatcggtatttgcagggatatcaacgagttgggagtcagttcatg
tattcgtcggtgattcggggagtgggttgtgtgttgggagatgatatgggtttgggcaag
actgtgcaagttatttcgcttgtcgcggcgttgttggagaagacggggacgggtgaggat
attgaacgaatgattcgggagatgctaatgggtggagtgcagaaaaaggatgttgttgat
ccgttggacggaatcaccgtcccaaactttgctcctatcctcattgtggtgccgtctagt
gttatcgatgtaaggggctacttcaacgttggtgtttacaggggcggcaatagagaaaag
gcaatcgatgacgtgagagaaggcaacaactttatcttgatcacaggcaaaagtttgttc
actcgtgaatcagattactcttattttgcaggtattaagtggaagcttgtcatcattgat
gagtttcacgaatacaagaaccacaagtccaatgcattcaaatgcttggaaggtgtccga
gacagcgagccattccctcctttgattggactgactggtacgcttatgcagaacaatcac
gatgaattgttcactctcatcgatctcgtgcgtccaggcattctagaagaccgcaagtcc
ttcatggacggcacctccaaacccatcatgcgtgcgagagccaaaggtgcgtctggtgag
acgttgtcactcgggaagcagcgagaagcagagctcaagaaggcgttagaaaacgtgtat
ctagaacgtcgcaaggatgttgtcttaaaggatactctcactgaaaaggacgaaaaggtt
atcttctgcgagttatccgaggtgcagaagaagctgtatcgccgcatcatatcgttgccc
gattactacatgttgtctactgcaaatgcaccctgcgactgtggtgtcaatcaagcatat
tttcgaggctatagcaagctcaagacgcagcaagaaaagatcaactaccaggtaacagag
ttgtgtaatgagttcgtctgctgttacaagctgtacaaagtttgtagccatgcatcgttg
ttgcaagttgacaaaagcctctcagacagcgagattcacaagaagttggagtttgccaag
gctgcgttcacccccgagattctgcgcgagatgcctggacaatcatactacaaatctgac
ggcattatgaacgaccatttgaacctttctggcaagatgaagactcttgattactgcctt
cgaaagtatcagaaaaagaggcatcgtgtcttggtgttctcgtactcaactgcaacgctg
gacttgatccagcagcacgtgaagacgcaagggtggacacatcttcgtttggatggccaa
actgctacgtctactcgccaagcgttggtggatcagttccagagggatcaggccatcttt
gtgtttttgatcagtacgagagctggggggttgggtttaaaccttactgccgcaaacaag
gttatcatctttgacgtgaactggaatcctagctacgatgagcaagcacaggacagatcc
tttaggatcggacaagagaagaacgttgaagtgttacgtctcgttgcaagaggcactatt
gaggaacagatgtatgctcgccaagtctacaagacgcaactcaagaagcaaacgcttgga
ttcaacgatgatggcaagaatcaaccacaaagtttccgtggagttgacagagataagcat
aggaagggagagctatttggtcttgagaacttgctcaagttcaaggatggctctttcatg
gagcttttgattgtccgtttcaacgaggatgatttggagaacgctgttgaagaggacggg
ttcgaggaagacgaaacgcgacaagctactaaattcgaacaggaagaaagtgatgacgat
gatgatgcagagatgaagaagaatgggtacaagcacgaggattttttcaacgaaaatcaa
gcaaaggcggaagtagacgaggagtctgaggaagaattgggtggcgagagccagatgatt
caagtgatgacgagcatcgcttgccaaggtatgaacgaggatgaatcatcgtatactgac
gaaggaagtgtgttaacttctcctcccgacaaaaagcctccttcgaagcccatcgccgag
gacgatgtgatcgacctggctggcccctctcctgtgaaaacggccaacaaagatgaggca
gatatggtcgacaaaaccaatgcgacacctgacgtagccaagagcaacggcaagacagaa
tctcctaactcgccgtacagtcctctgaaaactcaacaacctgccactcaatctcaacaa
cctgaaacggtcgcctccagtcaagcagcagcagcatcgtctacttcaactgcatccaaa
gcaaaaacacctcctcctgtcagtctcatgggggtggtcttgggcaaatccaagaagaag
aaagcagaacctgcaaataagaataaggctggtggtttgtatatccctgcatatgcccgg
gg

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