Turneriella parva: Turpa_2936
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Entry
Turpa_2936 CDS
T02157
Name
(GenBank) sigma54 specific transcriptional regulator, Fis family
Organism
tpx
Turneriella parva
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Gene cluster
GFIT
Motif
Pfam:
HTH_8
HTH_17
HTH_23
HTH_50
HTH_30
RWP-RK
HTH_28
Terminase_5
Motif
Other DBs
NCBI-ProteinID:
AFM13575
UniProt:
I4B8G8
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Position
complement(3067457..3068947)
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AA seq
496 aa
AA seq
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MFRVLLITRNRALAQHCRKNLPEGYRLRSIGKLNLRNETLAGSIVVFDSALLIESTDAII
ASVAGQYAAESGGVSLGLLLNEEDRTKAFSLFPQNLNHIDAIGHYRLQAGRVHGLGRAEW
FWLLDSQRKKFEQFGERLLVRDENEMLVRRLERIEPESHTLKRFPAFMQGRSPAILKFRE
QVIEMSAAHSYLTLACSDAIPSDEFMEYYAALIHPARPLRYQIVDLAKVPAGLHAAAIWP
QRKTTHRSGGTNPAPIVCIKNVQLMGWQNQGLLLQQIKNLRDADKSAPAPRERYVLEVSQ
DISQHVRRGAFRQELLSVLRKAATTLPALHERPQDITKIAADYIFRRRFTPLIEGQVELA
AKILERFDLSSGYNGLYLTLDLLHDLAKSKGIPVFELFRAGDDAEAFRAAKSFLREQVEP
EPTTLFQGLASSEKAPLSLDSVERNYIAAVCERYGWQVTEAARHLSISRKTLYDKMRRYK
LMRPENTSRRSGRRAS
NT seq
1491 nt
NT seq
+upstream
nt +downstream
nt
atgtttcgtgtcttgctgataacccgaaatcgcgcgctcgctcagcactgccgcaaaaat
ctgccagaaggttatcggctgcgttcaatcggcaagctcaatcttcgcaacgagactctc
gccggcagcatcgtcgtgttcgattcggcattattgattgaatcgaccgatgcaattatc
gcttctgtcgccgggcaatacgctgccgagagtggtggcgtttcgctcggactcttgctg
aatgaagaagaccgtacgaaggcgttttcgctttttccgcagaatctgaatcatatcgat
gcgatcggccactaccgcctgcaggctggccgagtgcacgggcttggccgggccgaatgg
ttttggctgcttgattcacaacgaaagaaatttgaacaattcggcgagcggctgctcgtc
agagatgaaaatgaaatgctggtgcgccgtctggagcgcattgaacccgaatcgcacacc
ctgaaaaggtttccggcatttatgcagggtcgctcgcctgccattttaaaattcagagag
caggtcatcgaaatgtccgctgcgcacagttacctgactctggcctgcagcgatgcaata
ccgtctgatgagttcatggaatattacgccgcgctgattcatcctgcgcggccgctgcgc
taccagatcgtcgatctggcgaaagtacccgcgggtctgcacgctgccgcgatctggccg
cagcgcaagacgacgcatagatctggcggcacaaacccggcgccgattgtgtgcatcaag
aatgttcagctcatgggctggcagaaccagggtttattgctgcaacagatcaagaacctg
cgtgacgccgataaatccgcacctgcgccgcgcgaacgttatgtgctcgaagtttcacaa
gacatctcgcagcatgttcggcgcggggctttcaggcaagagctgctgtcggttctgcgc
aaagcggcgacgacgctgccagcactgcacgagcgcccgcaagacataaccaaaattgcc
gctgactacatcttcaggcgcaggtttactccgctcattgaagggcaggtagaacttgcg
gcgaagatactcgaacgttttgatctttcgagtgggtacaacgggctctatttgacgctc
gacttgttacacgatctcgcgaaaagcaagggtataccggttttcgagctgtttcgtgcc
ggcgatgatgcagaggcgtttcgggcagcgaaaagttttctgcgcgagcaggtcgaaccc
gaaccgacaacgctgtttcagggccttgcgagcagtgaaaaagcgccgctcagtcttgat
tcggtggagcgcaactacatcgccgccgtctgcgaacgttatggttggcaggtgaccgag
gcggcgcggcatctctcgatttcgcgcaagaccctctatgacaaaatgcggcgctataaa
ctgatgcggcctgaaaacacctcaaggcgcagcggtcgccgggcgtcgtga
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