Thermacetogenium phaeum: Tph_c10020
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Entry
Tph_c10020 CDS
T02276
Symbol
udgA
Name
(GenBank) uracil-DNA glycosylase
KO
K21929
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
tpz
Thermacetogenium phaeum
Pathway
tpz03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
tpz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
Tph_c10020 (udgA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tpz03400
]
Tph_c10020 (udgA)
Enzymes [BR:
tpz01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
Tph_c10020 (udgA)
DNA repair and recombination proteins [BR:
tpz03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
Tph_c10020 (udgA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
AFV11225
UniProt:
K4LGY0
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All DBs
Position
1034332..1034925
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AA seq
197 aa
AA seq
DB search
MDWLPQLDRCNTIQELQDVCLQCRRCGLRENSKRVVFGEGNENSRLMLVGEAPGAEEERL
GRPFVGAAGKLLNKILAAAGFRREDLYITNIAKCRPPGNRLPRKDEADSCYVYLVRQIEL
IKPRLIVCLGTLATQYLIHHQVKVSAVRGQVFEKGGIKIIATYHPAALLRDPGKKKPAWQ
DFQLIRNLYRECLEKNE
NT seq
594 nt
NT seq
+upstream
nt +downstream
nt
atggattggctgccgcaattggaccggtgcaatactattcaagagcttcaggatgtctgc
cttcagtgccgtcgctgcggactgcgagaaaattcgaaaagggtggtttttggtgagggg
aatgagaattcgaggttgatgctcgttggagaagcgcctggcgccgaagaggagcggctg
gggcgtccttttgttggagcggcggggaagttgttgaataaaatcctggcagcggccgga
ttccgccgggaggatctctacattaccaatatcgccaaatgccggccgccggggaacagg
ctgccgaggaaggatgaggcggatagctgctatgtctacctggttcggcagatagaactg
atcaagccgcgcctgattgtttgcctgggcacgctggcaactcagtacctcatccatcat
caggttaaggtatcggcggtcaggggacaggtattcgaaaagggcggcatcaagatcata
gcaacctatcatccggcagccctgctgcgcgatccgggaaagaaaaaacccgcctggcag
gactttcagttgatcaggaatctttatcgggaatgcctggaaaaaaatgaataa
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