Trichoderma reesei QM6a: TRIREDRAFT_56853
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Entry
TRIREDRAFT_56853 CDS
T02991
Name
(RefSeq) hypothetical protein
Organism
tre
Trichoderma reesei QM6a
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_12
AAA_11
ZnF_RZ-type
AAA_19
zf-CCCH
zf_CCCH_4
zf-CCCH_4
SLFN-g3_helicase
AAA_30
UvrD-helicase
AAA_16
zf-CCCH_2
Motif
Other DBs
NCBI-GeneID:
18486063
NCBI-ProteinID:
XP_006962793
JGI:
Trire2_56853
UniProt:
G0RBA0
LinkDB
All DBs
Position
Unknown
AA seq
1803 aa
AA seq
DB search
MLICPRWSSFTYPTPPSTPSEGSLKPCFFFLRDNSCKFGARCKFSHNVSSSTLPARQPYG
RHPGAPSSLPGNRHDRSSEGKLSTWKRMLKSGQDTARPSQAIVSQFLKLAVELMDGDVGG
AQETIRLLVTEAGLSFIKDVIDRHIPMDNISITGNRLWETEIKPLFQLVTHPRVVDSAVL
EQEVAAIFNYLVGVGGARMNKLFHYVVSLFQQWPPTSTQGSLIEAVELSLAVLAKMLDCN
TTNIINEAFSTFADSLASPLDKSEEPDEMVHRLQAKKHLHYIRQRLQIGDELPDLATRPQ
ASVTRETFMLTRDLPGRLSRGGPRHNNDHANIAHIKILPTYEEIMSPREEYLPTNDCSQW
HIPGIRGRLDREFRLIREDTVGQLRDAVRDAFTQIRGATAGVSHHANSNNLRTYTYGSAA
LIDLQFDTNTGLDLIVRCAQPPAVRALSARQRRDWWEKSKRLQAGALVCVLDGTESVMFC
IVSESTMRNKDDKKDRFEKKPADEDLETPEKREPLTLSDNESYLHVNLQLIDANPDDVAQ
ALDWYTGIKSSHHRYLVEFPGILLASFKHTLDALKEMSQRPKMPFVDLLAPTNVTTTEVD
LQPPLYARKAGFAFDIRCITNDQAELLVSPQRPLNPRLIESRTTLDRTQSSALLNTLSRE
LSLIQGPPGTGKSYSGEKIIKVLLANKRIASIGPILCVCYTNHALDQLLEHLLDDGIKKI
IRIGSRSKSERLQALNLRMVSQNSDRTRSEKGSLWDIQQELNELRNSMKDSLQRLSASDS
LQSIKTFLAHHFPRHHDALFGVEEDGWQTVGNRPDVALRRWLTGGSRDNTHCRDLGVLRQ
TRLSVMNHAERQALHRDWLESIVAPILRTITSLQSEYAELMERRGRVRSDVDLRCLNQAD
IIGVTTTGLAKNLDLLRKLRCKVMLCEEAGEVLEAHILTALLPSIEHAILIGDHLQLRPQ
IQNYELQSTNPRGRQYSLDTSLFERLVEPPHLTDLRLPFSTLETQRRMHPSISELIRSTL
YPSLQDGENVMNYPKVAGMKDRLFWLHHEHLEAGAASHDPLNTSHSNDFEVEMTVSLISH
LVKQGEYSQDDIAVITPYLGQLHKLRRRMQSMFEICLNDRDLAELEDFEDRDGEAPMTAK
WKQSGKTTLLKSVRAATVDNFQGEEAKVIIISLVRSNLQKKCGFLSTSNRINVLLSRAKH
GMYIIGNSSTYYNVPMWEQVIDMLTASGRLGTHLELQCSRHPNTPIRVSKPDHFLQFSPE
SGCNLPCDKRLHCGHSCTASRSRAATGCLRPSAGRIKIPLLFAARSPSDARCQAAVMRSR
CNATKTCVGPSLCGEACPDKAFCQQCASESVRSICVDFLEMKEYHEINLDEEPCIFPDCG
HFLTTSSMDGQMGMSAYYDMDEEGHPTRLSKTSEPFSLDKSGIPVCATCRGSLRNIARYG
RIVRRAILDESTKKFLAWSHEQYLSLANRLIKEEEKLAQGTAGHAGQDNTGPSSLKKGQF
IGSAQRLKQLRELQRMVGKERYDSIIELWRQIGRHANNVRLEEQPFQRVADLVQFANREN
KASREEFRYDESVVQVKGSLLADALLLKCEIAILFDFHRWMTRGGLAQAETEVKLDLSAH
WSDCVRLIEQSRLRKYVREEVQGHIFAAQLCGLCLSFDESASMWSANKGAKKEQTPDSLR
EEALSHIQQARTILSQYPSTASFQGEIDNVEMLINGGIYRRVTAEEMRAVYSAMTSEFSG
TGHWYTCENNHPFTIGECGMPMQEARCPECGARIGGQNHRAVAGTRHATEIENLARGMNG
LGL
NT seq
5412 nt
NT seq
+upstream
nt +downstream
nt
atgcttatatgtcctcggtggtccagcttcacctacccgactcctccctccacaccgtcg
gaaggctctctcaagccatgctttttctttctacgggacaatagctgcaaatttggagcg
cggtgcaaattctcgcacaatgtgagcagcagcacactgccggcccggcagccctatggg
aggcatcccggcgccccttcaagcctgcctggtaacagacacgatcgctcatcagagggc
aagctatcaacatggaagcgaatgctcaagagcggacaagatacggcccgaccttcacag
gctatagtcagccagtttctcaagttggccgtggagcttatggatggagacgttggcggc
gctcaggagacgatcaggctcctcgtcacagaagccggtctatcattcatcaaggacgtc
atcgaccggcacatcccaatggacaatatatccatcacaggcaaccgtctctgggaaacg
gagatcaagccactgttccagcttgtgacccatcctcgtgtggttgactctgccgtcttg
gagcaagaagtcgcagccatattcaactacctcgtcggagtgggaggtgctaggatgaac
aagctgttccactatgttgtctcgcttttccaacaatggccacccacctcgacacaggga
tcactcatagaggctgtcgagctgtctcttgcagtgttggccaagatgctggactgtaac
actacaaacatcatcaacgaggccttctcgacatttgccgacagcttagccagtcccctg
gataagtcagaggagccggacgaaatggtccatcgcctacaagcaaagaagcatcttcat
tacatccgtcagcgtctgcagattggagatgagcttccggatctggcgacgcgacctcaa
gcttctgtgacgcgagagacctttatgctgacccgagatcttcctggccgcttgtctcgg
ggagggccaaggcacaacaacgatcacgcaaacatcgcccacatcaagatactgccaacg
tacgaggaaatcatgtcgccgcgagaggagtatctaccaaccaatgactgctcccagtgg
catatccctggcattcgtgggcgtcttgacagggagttccgtctcatacgagaagacacg
gttgggcagctccgagatgcagtccgcgatgcttttacccaaattcgcggtgccaccgcc
ggtgtcagccaccatgcgaactccaacaacttgcgaacgtatacatacggctctgccgct
ctcattgaccttcagttcgacacgaacactggtctggatctaatcgtccgttgtgcgcag
cctcctgcagtgcgggcgctcagcgctcgacagagaagggactggtgggagaaatcaaag
cggctccaagccggcgcactcgtatgcgtcttggatggaactgagtccgtcatgttttgt
atcgtgtccgagtccacaatgaggaacaaggacgacaaaaaggaccgctttgagaagaag
ccagcggatgaggatctagagaccccagagaaacgcgagccgttgactctttcagataat
gagagctacttgcacgtcaatttgcagctcatcgatgcaaacccagatgacgttgcccaa
gctcttgactggtacacgggcataaaatcatcacaccatcgatatctcgtcgaattccct
ggcattcttctggcgtctttcaagcatacccttgatgctctcaaggaaatgtctcagagg
cctaagatgccatttgttgatctcttggctcctacaaacgtgactactaccgaagtcgac
ctgcagccccctttgtacgcgagaaaggctggctttgcctttgacatcaggtgtataacg
aacgatcaggccgagttgcttgtttcgccgcagcggcccctgaatccaagactgattgag
tcgcggaccaccctcgaccgtacccagtcttctgccctcttgaataccctgtcgcgggag
ctgtcgctcattcaaggtccgcccggtaccggcaagagctatagcggcgaaaagattatc
aaagtcttattggcaaacaagaggattgccagtattgggccgatattgtgcgtctgctac
acgaatcatgcgctggatcagcttcttgaacaccttcttgatgatggaatcaaaaagatt
atacgcattggctcccgatcaaagtcagagaggcttcaagccctcaacctacggatggta
tcccaaaatagcgaccgcacgcgatcggaaaagggcagcctctgggacatacagcaggaa
ttgaatgaactccgaaacagcatgaaggactcgcttcaaaggctctcggcatcggactcg
ctacagtccatcaagacgtttctcgcgcaccactttcccaggcatcatgacgcgctgttt
ggcgtggaagaagacgggtggcagacggttggcaaccgacctgacgtggccttgcggcgg
tggcttacgggtggctcgcgtgacaacactcactgtcgagatctcggagtcctaaggcag
acgagactatccgtcatgaaccacgccgagcgccaagcattacatcgagactggctggag
agcatcgtggctcccatcctccggaccattaccagccttcagagtgagtacgccgagctg
atggagcggcgtggtcgtgtgcgcagcgatgtggatttacgctgcctgaaccaggcggat
atcattggagtgacaacaacaggcctggccaagaacttggatcttctccgaaaactacga
tgcaaggtcatgctgtgcgaggaagctggagaggtattggaggcgcacatcctgacggca
ctgctgccgtcgatcgaacatgccatcttgatcggtgaccatcttcagctgcgcccgcag
atacagaactacgagcttcagagcacaaatccccggggcagacaatattccctcgacacg
tccttgttcgaaaggctcgtcgagccgccacacctgacagacttgcggcttccattcagc
acgttggaaacccagagaagaatgcacccatcgatctctgagctcattcggtcaacgctg
tatccatccttgcaagatggcgagaacgtgatgaattatccaaaggtagccggaatgaag
gaccgactcttttggcttcaccatgagcatctggaagccggtgcggcaagtcacgacccc
ttgaacacctcccactcgaatgatttcgaagtcgagatgaccgtgtctctcatatcccat
ctcgtcaagcagggagaatactcccaagacgacattgccgtcattacaccatacctagga
caactacacaagctgcggcgtcgaatgcaatccatgttcgagatctgcctcaacgatcgc
gatcttgctgagctggaagattttgaagacagagacggagaggccccgatgacggcgaag
tggaaacagtccggcaagacaacgcttctcaagagtgtcagggccgcaaccgttgacaac
ttccagggcgaggaagccaaggtcatcatcatctcccttgtccggagtaacttgcaaaag
aaatgtggctttctcagcacgtctaaccggatcaatgttctattatcgcgggcgaagcac
ggcatgtacatcatcggaaactcaagcacatactacaatgttcccatgtgggagcaagtc
attgatatgctgacggcaagcggccgcctcggcacacacctggagcttcaatgcagccgg
catccaaacacgcccatccgggtctcaaagcctgaccatttcctgcagttctctcccgag
agcggatgcaacctgccatgtgacaagagacttcattgcggccattcttgcaccgcctcg
cgctcccgtgcggccaccggctgccttcgcccaagtgctgggagaatcaagatcccgctg
ctgttcgctgcaaggtccccgtcagacgcacggtgccaggctgcagtcatgaggtcgagg
tgcaatgccacgaagacttgtgtaggtccttcgctctgcggagaagcatgtcctgataag
gctttctgccagcagtgcgcaagtgaatctgtgagatccatatgtgttgacttcctcgag
atgaaagagtatcatgagataaatctagacgaggagccttgcattttcccagattgtgga
catttcctgaccacgtcgtcaatggatggccagatgggcatgagtgcatactatgacatg
gatgaggaaggccatccaacgcggcttagcaaaacttccgagcctttctcgctggacaag
tctggcatcccagtctgcgcaacctgccggggctctcttcgaaacattgccaggtatggc
cgaatcgtgcggcgagccatactagacgaatcaaccaagaagttcctggcctggtcgcat
gagcagtacctctccctagcaaatcggctgatcaaggaagaggagaagcttgcgcaggga
accgctggacacgcgggccaggacaatacaggcccctcgagccttaaaaagggtcagttc
atcggctcagcccagaggctgaagcagcttcgagagctgcagagaatggtgggaaaggag
aggtatgactccatcatcgagctttggaggcagattgggaggcacgccaataatgttcgg
ctggaagagcagccattccagcgggtggcagacctcgtgcagtttgccaaccgcgaaaac
aaggcaagccgagaggaatttcggtacgacgagtccgtcgttcaggtcaaggggtcgctt
cttgcagacgctctgctgctcaaatgcgagattgcgatcctcttcgactttcatcgctgg
atgacgcggggaggcctggcgcaggcggagacggaagtcaagctggacttgtcagcccac
tggtctgactgtgttagactcattgaacagtctcgcctgcgcaagtacgtgagggaagaa
gtacagggccacattttcgccgcgcagctctgcggattgtgcttgtcgtttgacgaatcc
gccagtatgtggtctgccaataagggcgccaagaaggagcaaacaccggacagtctgaga
gaagaggcgctgagccatatccagcaagctcggactatattgtcccagtatccttcaacg
gcctcgtttcagggagagattgacaacgttgagatgctgatcaacggcggcatataccgc
cgagtcacggcggaggaaatgcgagcagtgtacagcgcaatgacgagtgagttctcgggc
accgggcactggtacacctgcgagaacaaccatccgtttaccattggcgaatgcggaatg
cccatgcaggaagcgagatgtcccgagtgcggagccaggataggggggcagaaccatcgg
gcggtagcggggacgagacatgcgacagaaattgagaatctggcgagaggcatgaatgga
ttgggcctgtga
DBGET
integrated database retrieval system