Thermomicrobium roseum: trd_1114
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Entry
trd_1114 CDS
T00845
Name
(GenBank) DNA polymerase III epsilon subunit
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
tro
Thermomicrobium roseum
Pathway
tro03030
DNA replication
tro03430
Mismatch repair
tro03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
tro00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
trd_1114
03430 Mismatch repair
trd_1114
03440 Homologous recombination
trd_1114
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
tro03032
]
trd_1114
03400 DNA repair and recombination proteins [BR:
tro03400
]
trd_1114
Enzymes [BR:
tro01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
trd_1114
DNA replication proteins [BR:
tro03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
trd_1114
DNA repair and recombination proteins [BR:
tro03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
trd_1114
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
DEDDh_C
Motif
Other DBs
NCBI-ProteinID:
ACM05761
UniProt:
B9L0P4
LinkDB
All DBs
Position
complement(1094467..1095153)
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AA seq
228 aa
AA seq
DB search
MSGQGNWFTRLAGALVERVGRDRRGATLSNLAYTVLDAEMTGLDPERDELLALGAVRMVG
TRLLLGASFYQLIRPQRQGWGQSVTVHGIRPVDVVGAPPLEQVLPEFVRFCASSILVGHG
VEIDRKFLQRAAARCGLSWPRTYWVDTGRVARWLTSHHGALPEAAADRGRFSLEDLLAAY
EIEPPARHHALADAFVTALVWQRQLTELATEGVRTLRDLRLAGLITSA
NT seq
687 nt
NT seq
+upstream
nt +downstream
nt
atgagcgggcaggggaactggttcacgcgcctggcgggcgccttggtggagcgggttggt
cgggatcgccgcggcgcgacgctttccaatctcgcgtacaccgttctcgatgccgaaatg
accggactcgatcctgagcgggacgagttgctggcgctgggtgctgtgcgcatggtcggg
acgcgacttcttctcggcgcatcgttctaccagctgattcgaccgcaacggcagggctgg
ggacagagcgtgaccgtgcacggaatccggccggtcgatgtggtaggggctccgccactg
gagcaggtcttgcctgagtttgtgcgcttttgcgcgagcagtattctcgtgggacacggc
gtcgagatcgatcggaagttcttgcagcgagcggcggcgcgctgtgggctttcctggccg
aggacgtattgggtggacaccggtcgcgtggcacgctggctcacctcccatcatggagcg
ctgccggaggcagcggcagaccgggggcggttcagtttggaggacttgctggcagcatac
gagatcgagccaccagctcgccatcatgccttggccgatgcgttcgtgacggccttggtt
tggcagcggcagttgacggaactagcgactgaaggcgtgcggaccttgcgcgatcttcgc
ttggcggggttgattacctcggcatag
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