Takifugu rubripes (torafugu): 101062368
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Entry
101062368 CDS
T02386
Symbol
lrsam1
Name
(RefSeq) E3 ubiquitin-protein ligase LRSAM1 isoform X1
KO
K10641
E3 ubiquitin-protein ligase LRSAM1 [EC:
2.3.2.27
]
Organism
tru
Takifugu rubripes (torafugu)
Brite
KEGG Orthology (KO) [BR:
tru00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tru04131
]
101062368 (lrsam1)
04121 Ubiquitin system [BR:
tru04121
]
101062368 (lrsam1)
Enzymes [BR:
tru01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
101062368 (lrsam1)
Membrane trafficking [BR:
tru04131
]
Autophagy
Xenophagy
Other xenophagy associated proteins
101062368 (lrsam1)
Ubiquitin system [BR:
tru04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
101062368 (lrsam1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_8
zf-C3HC4_3
LRR_4
LRR_1
SAM_2
SAM_1
Prok-RING_4
zf-RING_2
Motif
Other DBs
NCBI-GeneID:
101062368
NCBI-ProteinID:
XP_003978791
Ensembl:
ENSTRUG00000000726
UniProt:
H2RNN4
LinkDB
All DBs
Position
6:113669..129932
Genome browser
AA seq
730 aa
AA seq
DB search
MPLFFKKKPSEDSKKKLEFQLCLSKEAGADDVLDISACELSEVPTSAYSICKVIQKKVLI
LHNNELRSLVPKGCDIGTLATLKVLDLHENKLTSLPEDIGKLTSLQILNVEKNRLKSLPP
SIGDLQLLQTLNVKGNCLCELPFSIGSLSSLRTLNVSDNNIVQLPKQLAYIRTLETFTLD
AAMMTYPPSSVCVEGTESIQRFLCSEVVIEYCPPSQYLLPVLEHDCGKQDTNSFDSLEEA
WKNKFSNYEKRKEEKQQQKLDFERHLEEKQKEHTQLFLMNIAHKESMLSSVRQEQERLEH
GVSQQQKVQDAERMLMLEKVRQAEDDISSRINNMLMDNNRQKKSAAFFQALEEDRIRMEH
LAAITQEEANSLRKKEVAVAMQRMLSDSSTMSLLHEVNDVRRQTLVSETCKSMEYFDRKF
DRVMSLQLLDKSKAITQIIQEEEMQKAAFQALQLQKDAVHNYIRDQIKLIEDDLKQLTKL
EIKRRNLDTENLQEFLVEQRSALSGMLQQLMKQRDQREQELRQVLVEMQLKSDSNQQNYW
MIQYQRLLNTKPLTLRMQEAGVETGLVNMLCKLSAQHYLPILVHHKVTTESLRHMKSSDL
KKLGIHEIGVQKALLNWAQENNPETASQKNDEAASVPMASPPLTPSLLPNAIVFHAPSSP
VTPGTPVTPSAPSPVEGPGISECVVCMEAAAQIIFLPCGHVCCCQVCSGALQGCPLCRST
ILQCVRLYHG
NT seq
2193 nt
NT seq
+upstream
nt +downstream
nt
atgcctctgttcttcaaaaagaagcccagcgaagactccaagaaaaaactggaatttcag
ttgtgtctgtcaaaggaggcaggcgctgatgacgtcctggatatctctgcctgcgaactc
tcagaggttcctactagtgcctattccatttgcaaggttatacagaaaaaggtcctgatt
ctccataacaatgagttgaggtcacttgtgcctaagggttgtgatatcggtacacttgcc
acattaaaggttttggatttgcatgagaacaagctcacttcacttccagaggacattggg
aaactgacatcattgcagattcttaacgtggagaagaaccgcttaaaatctctgccacct
tctattggagatctgcagcttctgcagactcttaatgtgaagggaaactgtctatgtgaa
ctgccgttttcaattggttctctgagtagcctgcgaaccttgaatgtcagtgacaacaac
attgtccagctgcccaaacaactggcttacatccgtacccttgagacctttacccttgat
gctgccatgatgacctatccaccttcatctgtgtgtgttgagggtacagagagcatccag
cgattcctctgctctgaggttgtgattgaatactgcccaccatcccagtatctgctgcca
gtgctggaacatgactgtggcaaacaggataccaacagttttgacagccttgaggaagcc
tggaagaataaattcagcaactatgagaagagaaaggaggagaagcagcagcaaaaactt
gattttgaacgacacctggaggagaagcaaaaagaacacacacagctttttctcatgaac
atcgcccacaaggaaagcatgctcagctcagtccgacaggagcaagagcgtctcgaacac
ggggtcagccagcagcagaaggtccaggatgcagaaaggatgctgatgttggagaaggtc
cgacaggctgaagatgatatcagcagtcgcatcaacaacatgctgatggacaacaacagg
cagaaaaagagtgcagccttttttcaagccctggaagaagatcgcatccggatggagcat
ttggctgccatcacacaggaagaagcaaattcactgaggaagaaggaggtagcagtggcc
atgcaaaggatgctctcagatagcagtaccatgagtctcctgcacgaggtcaacgatgtc
cgcagacagactctagtgtctgagacctgcaaaagtatggagtattttgacagaaagttt
gatagggtgatgtccctgcagcttttggacaaatctaaagccattacccaaatcatacag
gaggaggagatgcagaaagctgcatttcaggccctgcagctgcagaaagatgccgtgcac
aactacattcgtgaccagattaagctaatagaggatgatttaaagcagctgactaaatta
gagattaaaagacgcaatctggacactgagaacttgcaggagtttttggtggagcagcga
agcgctcttagtggcatgctgcagcagttaatgaaacaaagagaccaaagagagcaagaa
ctccgtcaggttctggtcgagatgcagctgaagtcagactccaaccagcagaattactgg
atgatccagtaccagaggctactgaacaccaaaccactgactctgcgtatgcaggaggct
ggcgtggagactggactggtcaacatgctgtgcaaactgtctgctcagcactatctgccc
atcctggttcatcataaagtcaccacggagtctttgcgccacatgaagtcatcagaccta
aagaagcttgggattcatgaaattggagtgcagaaggctcttctaaactgggctcaggag
aataaccctgaaacagcatctcagaagaatgatgaggcagcatccgtgcccatggcgtca
cctcctttaaccccatcattacttcccaatgccattgtctttcatgcccccagctcccct
gtcacccctgggacccccgttacaccttcagctcccagccctgtggaggggccaggcatc
tccgagtgtgtggtctgcatggaggctgcggctcagatcatctttttgccctgtggtcat
gtttgctgctgtcaggtgtgcagcggtgcattgcagggatgtcctctgtgtcgcagcacc
atattacagtgtgttcgtctttaccatggctaa
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integrated database retrieval system
