KEGG   Takifugu rubripes (torafugu): 101078349
Entry
101078349         CDS       T02386                                 
Symbol
snrnp200
Name
(RefSeq) U5 small nuclear ribonucleoprotein 200 kDa helicase
  KO
K12854  pre-mRNA-splicing helicase BRR2 [EC:3.6.4.13]
Organism
tru  Takifugu rubripes (torafugu)
Pathway
tru03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:tru00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    101078349 (snrnp200)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:tru03041]
    101078349 (snrnp200)
Enzymes [BR:tru01000]
 3. Hydrolases
  3.6  Acting on acid anhydrides
   3.6.4  Acting on acid anhydrides to facilitate cellular and subcellular movement
    3.6.4.13  RNA helicase
     101078349 (snrnp200)
Spliceosome [BR:tru03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   U5 snRNP specific factors
    101078349 (snrnp200)
 Complex C
   U5 SnRNP specific factors
    101078349 (snrnp200)
SSDB
Motif
Pfam: Sec63 DEAD Helicase_PWI ResIII Helicase_C BRR2_plug AAA_22 AAA_30 SWI2_SNF2 PhoH DUF603
Other DBs
NCBI-GeneID: 101078349
NCBI-ProteinID: XP_003977446
Ensembl: ENSTRUG00000001307
UniProt: H2RSA0
LinkDB
Position
21:1805309..1816399
AA seq 2136 aa
MADVTARSLQYEYKANSNLVLQADRSLIDRTRRDEPTGEVLSLVGKLEGSKMGDKAQRTK
PQKLEERRDKRRKRDEDRHDINKMKGFTLLSEGIDDMVGIVYKPKTKETRETYEVLLSFI
HAALGDQPRDILCGAADEVLAVLKNDKMRDKERRREVEQLLGPADDTRYHVLVNLGKKIT
DYGGDKDLQNMDDNIDETYGVNVQFESDEEEGDEDLFGEVRDKHSDEDSEGEEANVGCTL
TANLGVTGDVMTVKKKDLHPRDIDAFWLQRQLSRFYDDAIVSQKKADEVLEILKTTSDDR
ECENQLVLLLGFNNFDFIKILRQHRRMIQYCTMLASAQSEAEKERITGKMESDPELSKIL
YQLQETEKEDIIREERSRRERVRKSRVDDLESMDMDHGEAVAPRQLLDLDDLAFTQGSHF
MANKRCQLPDGSFRKQRKGYEEVHVPALKAKPFAENEVLVGIDKLPKYAQAAFEGFKTLN
RIQSKLFKTTMETDENLLICAPTGAGKTNVALMAMLREIGKHINMDGTINIDDFKIIYIA
PMRSLVQEMVGSFSKRLASYGITVSELTGDHQLCKEEINATQIIVCTPEKWDIITRKGGE
RTYTQLVRLIIIDEIHLLHDDRGPVLESLVARTIRNVELTQEDVRLLGLSATLPNYEDVA
TCLRVDPAKGLFYFDNSFRPVPLEQTYVGITEKKAIKRFQIMNEIVYEKIMEHAGKNQVL
VFVHSRKETGKTARAIRDMCLEKDTLGLFLREGSASTEVLRTEAEQCKNLELKDLLPYGF
AIHHAGMTRVDRTLVEDLFADKHIQVLVSTATLAWGVNLPAHTVIIKGTQVYSPEKGRWT
ELGALDILQMLGRAGRPQYDTKGEGILITSHAELQYYLSLLNQQLPIESQMVSKLPDMLN
AEVVLGNVQNAKDAVNWLGYTYLYVRMLRNPTLYAVSHDDRSSDPLLERRRLDLVHTASS
VLDKNNLIKYDKRTGSFQVTDLGRIASHFYVTHDSIQTYNQLLKPTLSEIELFRVFSLSS
EFRNITVREEEKLELQKLLERVPIPVKESIEEPSAKINVLLQAYISQLKLEGFALMADMV
YVTQSAGRLMRAIFEIVLSRGWAQLTDKTMNLCKMIDKRMWQSMSPLRQFKKLPEEVIKK
IEKKNFPFERLYDLNHNEIGELIRMPKMGKTIHKYVHQFPKLDLAVHLQPITRSTLKVEL
TITPDFQWDDKIHGSSEAFWILVEDVDSEVILHHEYFLLKAKYAQDEHLVTFFVPVFEPL
PPQYFIRVVSDRWLSCETQLPVSFRHLILPEKYPPPTELLDLQPLPVTALRNSAFEAVYQ
NKFPFFNPIQTQVFNAVYNSDDNVFVGAPNGSGKTICAEFAILRMLLHNAEGRCIYITPM
EALAEQVFVDWHQKFQDILNKKVVLLTGETSTDLKLLGKGDIIVSTPDKWDILSRRWKQR
KNVQNVSLFIVDEAHLIGGENGPVLEVICSRMRYISSQIERPIRIVALSSSLSNAKDVAH
WLGCSTTATFNFHPNVRPVPLELHIQGFNVSHTQTRLLSMAKPVYHAIMKHSPSKPAVVF
VPSRRQTRLTAIDILTFCAADVVPQRFLHCTEKDLAPFLEKLNDSTLKETLANGVGYLHE
GLSATERRIVEQLFNSGAVQVVVASRSLCWGINISAHLVIVMDTQYYNGKIHSYVDYPIY
DILQMVGRANRPMQDDEGRCVIMCQGSKKDFFKKFLYEPLPVESHLDHCLHDHFNAEIVT
KTVENKQDAVDYLTWTFLYRRMTQNPNYYNLQGMSHRHLSDHLSELVETTLHDLEQSKCI
SIEDEMDVAPLNLGMIAAYYYINYTTIELFSMSLNAKTKIRGLIEIISNAAEYKNIPIRH
HEDTLLRQLAQKVPHKLNNPKFNDPHVKTNLLLQAHLSRMQLSAELQSDTEEILSKAVRL
IQACVDVLSSNGWLSPALAAMELAQMVTQAMWSKDSYLKQLPFFTSEHIKRCTDKGVESI
FDIMEMEDEDRSALLQLSDVQMADVARFCNRYPNIELSYEVAEKDNIKSGSPVLVQVQLE
REEEVTGPVIAPLFPQKREEGWWVVIGDPKSNSLISIKRLTLQQKAKVKLDFVAPAMGIH
NYTLYFMSDAYMGCDQEYKFGVDVKEADSDGDSDSD
NT seq 6411 nt   +upstreamnt  +downstreamnt
atggcggatgttaccgctcgtagcctgcagtacgagtacaaagctaactcgaacttggtc
ttacaagctgatcggtctctgatcgaccgaacacggagagatgaacccaccggagaggtg
ctttccctggtgggaaagctcgaagggagcaagatgggtgataaagcccagaggaccaag
cctcaaaagctggaggaacgtcgagacaagaggcggaaaagagatgaagacaggcatgat
attaataaaatgaagggctttacacttctgtcagaagggattgatgacatggtgggcatc
gtgtacaagcctaaaactaaggagaccagagagacgtatgaagtgctgcttagctttatc
catgccgctttaggagatcagcctcgggatatcctgtgtggagcagctgatgaagtattg
gcagtgctaaagaatgataaaatgagagacaaggaaagacgacgagaggtcgagcaactt
cttggtccagctgatgacacacgttaccatgtgttggttaatttgggcaagaagatcaca
gactacggaggggacaaggatctacagaacatggatgacaacattgatgaaacctacggt
gtgaatgtccagtttgagtcggacgaagaggagggagatgaggacttgtttggagaggtc
cgtgacaaacactcggatgaggatagtgaaggagaggaggcaaatgtgggctgcactctc
acggccaacctcggtgtcaccggtgacgtgatgactgtgaagaagaaagatctacatcct
cgagacatcgacgctttctggctccagcgtcagctcagtcgtttctatgacgatgccatt
gtgtcccaaaagaaagccgatgaggttttggagatcctgaagaccaccagtgatgacagg
gaatgtgagaaccagctggtgttgcttttgggcttcaacaactttgatttcatcaaaatt
ctccgtcagcaccgacgcatgatccagtattgcaccatgctggcgagtgctcagagcgag
gcggaaaaggaacgaatcaccgggaagatggagtcggatccagagctgtcaaagatcctt
taccagcttcaggagacggagaaagaggatatcattcgtgaggagagatctcgcagggag
cgggtgaggaagtctcgcgttgatgacttggaatcgatggacatggatcacggagaggcg
gtggcaccacggcagctgctcgatctcgatgacctggccttcactcagggaagccatttt
atggccaataagcgctgccagctgccggatgggtcattccgtaaacagcgtaaaggttac
gaagaggtccacgtaccggcgctcaaagccaaaccttttgcagaaaatgaggtgcttgtt
gggatcgacaagttgcccaagtacgcgcaggctgcgttcgaggggttcaaaaccctgaat
cgcatccagagcaagctgttcaagaccacaatggagacggatgagaacctactgatttgt
gcacctacgggagccggtaagaccaacgttgcattaatggcaatgctgagagaaatcggg
aagcatataaacatggacggaaccatcaatatagatgattttaaaatcatctatattgca
cccatgcgctccctcgtacaggagatggtggggagctttagtaagcgtctggcaagttat
ggcatcacagtgtctgagctgactggagaccaccagctctgtaaggaggagattaacgcc
acgcagattatcgtctgcacccctgagaagtgggacatcatcacacggaaaggcggggag
cggacctacactcagctcgtgcggctcatcatcatcgatgaaatccacttgttgcacgat
gaccgtgggcccgtgttggaatctctggtggcgaggaccatccgtaatgtggagctgacg
caggaggacgtgcgtctgctgggcctcagcgccaccctgcccaactacgaggatgtggct
acctgcctgcgtgtggaccctgccaagggattgttctactttgataacagtttccgcccc
gtccctctggagcagacgtatgtggggatcaccgagaagaaagccatcaagcgtttccag
atcatgaatgagatcgtttatgagaaaataatggaacatgctggtaaaaaccaggtgttg
gtttttgtccactccagaaaggaaacggggaaaaccgccagagctataagagacatgtgt
ttggagaaggacaccctgggcctgttcctcagagaaggttcagcgtccaccgaagtctta
cgaactgaggctgagcagtgcaagaacctggagctcaaggatttgctgccttatggcttc
gcgatacaccacgctggcatgaccagagtcgaccggacgctggttgaggatctgtttgct
gacaagcacatccaggttctggtgtccacggcgactctggcctggggggtcaacctgcca
gcacacaccgttatcatcaaaggcacacaggtgtacagtccagagaaaggccgatggact
gaactgggagctctggacatcctccagatgctgggtcgagctgggcgtccccagtatgat
accaagggcgagggcatcctgatcacgtcccacgcagaactgcagtactacctgtccctc
ctcaatcagcagctgcccatcgagagtcagatggtcagcaagctgccggacatgctcaac
gccgaggtcgtgctgggtaatgtgcagaacgcaaaggacgccgtgaattggcttggctac
acctacctgtatgtgcggatgctccggaacccaacgctgtatgccgtctcccacgacgac
cggagttcagaccccctgctggagcgacgcaggctggacctggtgcacaccgcgtccagc
gtcctggacaagaacaacctcataaaatacgacaagaggactggcagcttccaggttaca
gacctgggccgcatcgccagtcacttttacgtcactcacgactccattcaaacctacaac
cagctgctgaagcccacgctcagtgagatcgagctcttcagagtcttctcactttcctct
gagtttagaaacatcactgtgagagaggaggagaagctggagctgcagaaactgctggaa
agagtgccgataccggtgaaagaaagcattgaagagcccagtgcaaagatcaacgtgttg
ctgcaggcgtacatctcccagctcaaactggaaggctttgccctgatggccgacatggtg
tatgttacacagagcgccgggagactgatgcgagccatatttgagatcgtcctcagcaga
ggatgggctcagctgacggacaagaccatgaatctttgcaagatgatcgacaagagaatg
tggcagtcaatgtccccgctgcgacagttcaagaagctcccggaggaggtgatcaagaag
atcgagaagaagaacttccccttcgagcgcctctatgacctaaatcataatgagatcggc
gagctcatccgaatgccaaaaatgggcaagaccatccacaagtatgtgcaccagttcccc
aaactggacctggccgtgcacctgcagcccatcacgcgctccacattgaaagtggagctc
acgatcaccccggacttccagtgggacgataagattcacggatcttccgaagctttctgg
atcctggttgaggacgtggacagcgaggtcatcctccaccacgagtacttcctgctcaaa
gccaagtacgcccaggatgagcacctggtgaccttctttgtcccggtgtttgagcctctg
cctccgcagtacttcatccgtgtcgtctcggaccgatggctctcctgcgagactcaactt
cctgtctccttccgtcacctgatccttcccgagaagtacccaccgcctactgagctgctg
gacctgcagccgttgcctgtcaccgcactcaggaactcggcctttgaggccgtctaccag
aacaagttccccttcttcaaccccattcagacacaagtcttcaatgccgtctacaacagt
gatgacaacgtgtttgtcggggctccaaacggcagtgggaagaccatctgcgcagagttt
gctattctgaggatgctgctgcacaacgccgagggacgctgcatctacattactccaatg
gaagctctggcggagcaggtgtttgtcgactggcatcagaagttccaagacatcctgaac
aagaaggtggtgctgctgactggggaaaccagcacggatctgaagctcctggggaaaggt
gacatcattgtcagcacccccgataaatgggacatactgtctcgacgctggaagcagagg
aagaacgtccagaacgtcagccttttcattgtggacgaggcccacctgattggaggagaa
aacggacctgtgttggaggtcatctgctccaggatgaggtacatctcctcacagatcgag
cgtcccatccgcatcgtggccctcagctcctctctgtccaatgccaaagacgtggcccac
tggcttggctgcagcaccacggccacgttcaacttccaccccaacgtgaggccggtgcct
ctggagctgcacatccagggcttcaacgtgagccacactcagacgcgcctgctgtccatg
gccaaaccagtgtaccacgccatcatgaagcactctccctccaaaccggcggttgtgttc
gtgccgtcccgccgccagacccggctcaccgccatagacatcctgaccttctgcgctgcc
gatgtggttcctcagaggttcttgcattgtaccgagaaagacctggctccatttctggag
aaactcaacgactccaccctgaaggagacgctggccaacggcgtgggttacctgcacgag
ggcctctccgcaaccgagcgcagaatcgtggagcagctcttcaactcgggagctgttcag
gtggtcgtggcctctcgctcgctctgctgggggatcaacatctcagcgcacctcgtcatc
gtcatggacacccagtactacaatggcaaaattcattcctacgtggactaccccatttac
gacatccttcagatggtgggcagggccaacaggcccatgcaagacgatgagggacgctgc
gtcatcatgtgtcagggctccaagaaggacttcttcaagaagttcctgtatgagccgctg
ccggtggagtcccacctggaccactgcctccacgaccacttcaatgccgagatcgtcacc
aaaactgtggagaacaagcaggacgctgtggactacctgacgtggacgttcctctaccgc
cggatgactcagaaccccaactactacaacctgcaagggatgtcccaccgtcacctgtcg
gaccacctgtctgagctggtggaaaccacgttgcacgacctggagcagtccaagtgcatc
agcatagaggacgagatggacgtggctccgctcaatctgggcatgatcgctgcctactac
tacatcaactacaccaccatcgagttgttcagcatgtccctgaatgccaagaccaagatc
cgcggcttaattgaaatcatctccaacgccgccgagtacaagaacattcccatcagacac
cacgaggacacgcttctgcgtcagctggcgcagaaggttccccacaaactgaacaacccc
aagttcaacgacccccacgtgaagaccaacctcctgctgcaggcgcacctgtccaggatg
cagctgagcgccgagctgcagtccgacaccgaggagatcctgagcaaggccgtgcgtctg
atccaagcctgcgtcgatgtcctgtccagtaacggctggctgagtcctgcgctggcggcc
atggagctggctcagatggtcacccaggccatgtggtccaaggactcctacctcaaacag
ctgcccttcttcacctcggagcacatcaagcgctgcaccgacaagggggtggagagcatc
tttgacatcatggagatggaggacgaagacagatcggcgctgctgcagctgtcggacgtg
cagatggccgacgtggctcgcttctgcaacagataccccaacattgaactgtcctatgag
gtggcggagaaggacaacatcaagagcgggagtccggtcctggttcaggttcagttggag
agggaggaggaggtgaccgggcccgtcatagcaccgctgttcccacagaaacgtgaggag
ggttggtgggtggtgatcggagaccccaagtccaacagcctgatctccatcaagaggctg
acgctgcagcagaaagcaaaggtgaaactggactttgttgctccggccatgggcatccac
aactacacgctgtacttcatgagcgacgcctacatgggctgtgaccaggagtacaagttc
ggcgtcgacgtgaaggaggcggacagtgacggagacagcgattcagactga

DBGET integrated database retrieval system