Thermus scotoductus: TSC_c12890
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Entry
TSC_c12890 CDS
T01414
Name
(GenBank) ABC transporter, periplasmic substrate-binding protein
KO
K02055
putative spermidine/putrescine transport system substrate-binding protein
Organism
tsc
Thermus scotoductus
Pathway
tsc02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
tsc00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
TSC_c12890
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
tsc02000
]
TSC_c12890
Transporters [BR:
tsc02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Putative spermidine/putrescine transporter
TSC_c12890
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_8
SBP_bac_1
SBP_bac_6
Phosphonate-bd
Motif
Other DBs
NCBI-ProteinID:
ADW21909
UniProt:
E8PR80
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All DBs
Position
complement(1229226..1230392)
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AA seq
388 aa
AA seq
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MRGWKVWMQGLAVLALLNPGYAQVPASKMRQSLGKLEGQLNILAWPGYIERGQSDPNYDW
VTPFEKATGCKVNVKVFASSDEAVALMNQGGYDLVTASGDATLRLIYGNKVQPVNYKLVP
STAKLDKRLRNGPWYVVNGVPYGVPYQWGPNVLAYNTKVFPTPPTSWKVVFEETMLPDGK
SNKGRVQAYYGPIYVADAALYLMKTRPDLGIKDPYELNEKQYQAVLGLLRQQRKIVQRYW
SDANQQVQDFINEGVVAAPSWPFQVNTLRAGNHPVSSTIPKEGATGWADTTMMHVDAKNP
NCAYKWLEWSLNPKVQGDIAAWFGSNPVVPEGCTASALLGKEGCAANGFNDFDKIYFWKT
PVANCKTQGQCVPYSRWVRDYIAIQGGK
NT seq
1167 nt
NT seq
+upstream
nt +downstream
nt
atgaggggatggaaagtgtggatgcagggtttggcggtcctggccttactgaacccgggc
tatgcccaggttccagcctccaagatgaggcagagcctgggaaagttggaagggcaactt
aacatcttggcttggcctggctacattgaacggggtcagtcggaccccaattacgactgg
gtcacgccctttgaaaaggccacgggatgcaaggtgaatgttaaggtgtttgccagttcg
gacgaggcggtggccctcatgaaccaaggcggttacgacctggtaaccgcttcgggagat
gccacgctgaggctcatctacggtaacaaggtgcagcccgttaactacaagcttgtgccc
agcacggcgaagctggataagaggttgcgcaatgggccttggtacgtggtgaatggggtg
ccctatggggtgccttaccagtggggacccaacgtgctggcctacaacacaaaggtcttc
cccacgccccccaccagctggaaggtggtgtttgaggaaaccatgcttcccgatggcaag
tccaataaaggacgggtccaggcttactatggccccatctatgtggcggacgctgccttg
tacctcatgaaaacccgtcccgatctagggataaaagacccttacgagctgaacgagaag
cagtaccaggcggtattggggctcttgcggcagcaacggaagattgtccagcggtactgg
tcggatgctaaccaacaggtacaagactttatcaacgaaggggtggtggccgcaccttcc
tggcctttccaggtgaacacccttagagcagggaatcacccggttagcagcaccattccc
aaagaaggggcgactgggtgggcggacaccaccatgatgcacgtggatgccaagaacccc
aactgtgcttacaaatggttggagtggagcttgaaccccaaggtgcagggagacatcgct
gcctggttcggctccaacccggtggtaccggaagggtgcaccgcgagtgcgttgctgggt
aaggaggggtgcgctgctaacgggttcaacgactttgacaaaatctatttctggaagacg
cctgtggctaactgcaaaacccagggacagtgcgttccctactcgcggtgggtgagggac
tacatcgcgatccaggggggtaagtag
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