Thermoanaerobacterium saccharolyticum: Tsac_1243
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Entry
Tsac_1243 CDS
T02137
Name
(GenBank) UvrABC system protein B
KO
K03702
excinuclease ABC subunit B
Organism
tsh
Thermoanaerobacterium saccharolyticum
Pathway
tsh03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
tsh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
Tsac_1243
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tsh03400
]
Tsac_1243
DNA repair and recombination proteins [BR:
tsh03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Tsac_1243
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
Tsac_1243
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrB_inter
UvrB
Helicase_C
ResIII
UVR
DEAD
AAA_30
Kinesin
Microtub_bd
DUF87
AAA_22
DUF3071
Motif
Other DBs
NCBI-ProteinID:
AFK86254
UniProt:
I3VUQ9
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All DBs
Position
1286254..1288239
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AA seq
661 aa
AA seq
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MSEFKLVSDYKPTGDQPEAIRKLTEGVNMGLKCQTLLGVTGSGKTYTMANIIKNVNKPTL
VIAHNKTLAAQLCAEFKEFFPENAVEYFVSYYDYYQPEAYVPQTDTYIEKDASINEEIDK
LRHSATAALFERRDVIIVASVSCIYGLGDPEDYEELMLSLRPGMIKDRDEILKKLVDIQY
ERNDINFVRGKFRVRGDVIEVFPASSSDKAIRIELFGDEIDRITEIDVLTGEIIGERSHV
AIFPASHYATSKEKLKKAIESIEKELEERYKELKDQGKILEAERLKQRTNYDIEMLQEVG
YCSGIENYSRHISGRAAGSPPYTLLDYFPDDFLMFIDESHVTIPQIRGMYNGDRARKESL
VDFGFRLPSAFDNRPLKFEEFEERINQLICVSATPGPYELEHSERVVEQIIRPTGLVDPE
VVVKPVKGQVDDLLSEIKMTVEKGYRVLVTTLTKKMAEDLTDYFRDMGVKVKYLHSDIET
IERMEIIRDLRLGKFDVLIGINLLREGLDLPEVALVAILDADKEGFLRSETSLIQTIGRA
ARNADGRVIMYADTVTESMKNAINETNRRRAIQMEYNKKHGITPKTIVKGIRDVIEATKV
AEDNGTYKVKKAEVIDKVSIEKMINELEKEMKKAARDLEFEKAAKLRDKIFELQKMMKNA
I
NT seq
1986 nt
NT seq
+upstream
nt +downstream
nt
atgagtgagttcaaacttgtatcagattataagcctacaggtgatcagccggaggcaata
agaaaattgacagaaggcgtaaacatgggccttaagtgtcagacgctattgggggtcacc
ggttctggcaagacatacactatggcaaatatcataaagaatgtcaataaacctacactt
gtaattgcacataataagacgttagcggctcaactttgcgcagagtttaaagaattcttt
ccagagaacgctgtagaatattttgtaagttactatgactactatcaaccagaggcttat
gttccacagacagatacttacattgaaaaagatgcgtccataaatgaagaaattgataaa
ctgaggcattcagctactgcagcgctttttgagagaagagatgttattattgttgccagc
gtttcatgtatatacggattgggtgatccggaggattatgaggagcttatgctttcttta
aggcctggcatgataaaagatagagatgaaattttgaagaaacttgttgacatccaatat
gaacgaaatgacatcaattttgtgagaggcaagtttagagtaagaggtgatgtgatagag
gttttcccagcatcatcatctgacaaagcaataaggatcgagctttttggcgatgagatc
gatagaatcacagaaatagatgtattgactggagagataatcggcgaaagaagccatgtg
gctatctttccagcatcacactatgctacatcgaaagaaaagttgaaaaaagccatagaa
agcatagaaaaagagctggaagaaaggtataaagagcttaaagatcaagggaaaatttta
gaagctgaaaggcttaaacagaggactaattacgacatcgagatgcttcaagaagttggc
tattgttccggtatagagaattattcgaggcacatatcaggcagggctgctggaagccca
ccttatacgctattagattatttccctgatgattttttgatgttcatcgatgaatcccat
gttacaataccgcagattagaggcatgtacaatggtgatagagcaagaaaagagtcttta
gtagattttggatttaggcttccgtctgcatttgacaataggcctctgaaatttgaggaa
tttgaagaaaggataaatcagcttatatgtgtttctgctacgccagggccatatgaatta
gagcactctgagagggttgttgagcaaataataaggccaacagggcttgtagacccagaa
gtagttgttaaacctgttaaagggcaagtagatgatctgctaagcgagataaaaatgact
gttgaaaaaggatacagggtattagtcacgactttgacgaaaaagatggctgaagacttg
acagattattttagggacatgggcgtaaaagtgaaatacctccattcggatattgagacg
atagagagaatggagataataagggatttgaggcttggcaagtttgacgtcttaatcgga
ataaatctattgagagaaggcttggatttgcctgaagtggctttggttgccattcttgat
gcagataaagaaggctttttgcgatctgaaacttcacttatacagactataggccgtgct
gcgagaaatgccgatggtagagtcatcatgtatgcggacactgtaacagaatctatgaaa
aacgccataaatgaaaccaacagaagaagagccatacagatggaatacaacaaaaagcac
ggcattacgccaaagacgattgtaaaaggcataagagatgtgatagaggctacaaaggta
gctgaagataatggcacttataaagtgaagaaggcagaagtaatagacaaggtgtctatt
gagaaaatgataaatgagcttgaaaaagagatgaaaaaagctgcaagagaccttgaattt
gaaaaagctgcaaaactcagagataagatatttgaacttcaaaagatgatgaaaaatgct
atatga
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