Thermococcus siculi: A3L11_06060
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Entry
A3L11_06060 CDS
T05103
Name
(GenBank) DNA topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
tsl
Thermococcus siculi
Brite
KEGG Orthology (KO) [BR:
tsl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
tsl03032
]
A3L11_06060
03400 DNA repair and recombination proteins [BR:
tsl03400
]
A3L11_06060
Enzymes [BR:
tsl01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
A3L11_06060
DNA replication proteins [BR:
tsl03032
]
Prokaryotic type
DNA Topoisomerases
A3L11_06060
DNA repair and recombination proteins [BR:
tsl03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
A3L11_06060
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim
zf-C4_Topoisom
DUF4364
Motif
Other DBs
NCBI-ProteinID:
ASJ08809
UniProt:
A0A2Z2MKA0
LinkDB
All DBs
Position
1123166..1125352
Genome browser
AA seq
728 aa
AA seq
DB search
MVTLIIAEKPNVARKIAYALAEGKPVRKTIGKVSYYEFTRDGKRIIVAPAVGHLFSLAPK
VKTYGYPIFDIEWVPVYVAEKGKSYAKDYIKALATLAKRADEFVVACDYDTEGEVIGYTA
LKYACGVDPSKAKRMKFSALTKKDLLRAWYNLEPTINFGMADAGIARHVLDWYWGVNLSR
ALTSAIKRASGKWMVLSTGRVQGPTLKFLVDREKEIQNFKPTPYWVIKMILEKNGEQYTA
TYEKERILDEEEAKRIVEEAKKGPAFVEKVEVKQQKRNPPVPFDLGTLQREAYSAFGYSP
KKTLEIAQKLYEKGLQSYPRTSSQKLPKNLNFRTILQNLAKLPEYKPFAHALLGKDRLKP
VEGKKDDPAHPAIYPTGELPKPGDLTKDEQNIYDLVVRRFLALFMEPAVRETMKVIINSN
GHRFILSGARTVKEGWLKVYGKYVKFDEVILPAFREGEPVKVLQIKREKKKTKPPARYSP
AAVIKRMEDLGIGTKATRAQILETLYSRGYIEGKRKIKVTPLGMRVIEALEKNVPDIVSV
ELTRAFEEKMEEIMAGKARKDQVIEESKNQLVKILQVFKEKELDIGRILLETTGTGATPS
KSTARKAGAVKEISAEEEEEARKTVDGKAEARNENAGRPQRKALVIGKCPKCGGDLVVRY
NRKTGKRFVGCSNWPKCNVTYPLLQRGEIIPTNKTCCGGAPVVKIREKGREYEICVDMNC
RDWKKGKK
NT seq
2187 nt
NT seq
+upstream
nt +downstream
nt
atggtcacgctcatcatcgcggaaaagcccaacgttgccagaaagatagcctacgcttta
gccgaaggcaagccagtcaggaaaaccatcggaaaggtgagctactacgagttcacccgc
gacgggaagaggataatcgtcgctccagcagtcggccacctcttctcccttgcccccaag
gtcaagacctacggctatcccatctttgatatcgagtgggttcccgtctacgtggctgaa
aagggcaaatcctatgccaaggactacatcaaggccctggcaaccctcgcgaagcgggcg
gacgagttcgtggttgcctgcgactacgataccgagggtgaggtcataggctacaccgcc
cttaaatacgcctgtggcgtcgatccgtcgaaggcaaagcgcatgaagttctcggctttg
acgaagaaagacctcctgagggcctggtacaacctcgaaccgaccataaactttggcatg
gccgacgcgggaatagctcgccatgtcctcgactggtactggggcgtcaacctctccagg
gcgctcacatcggcgataaagcgcgcgagcggcaagtggatggtcctctccaccggaaga
gtgcaggggccgacgctgaagtttctggttgaccgcgagaaggagatacagaacttcaag
ccgaccccatactgggtcataaagatgattctggaaaagaacggggagcagtacaccgcg
acctacgagaaggagcgcatactcgacgaggaggaagcgaagcgcatagtcgaggaggcg
aagaaagggcctgccttcgtcgagaaggtggaggtaaagcagcagaaaagaaatcccccg
gtcccctttgacctgggaactctccagagggaggcctactccgccttcggctactccccg
aagaagacccttgagatagcgcagaagctgtacgagaagggccttcaatcgtaccccagg
acctcctctcaaaagcttcccaagaacctcaacttcagaaccatactccagaacctggcc
aagttgcccgagtacaagccctttgcccacgcactcctgggaaaggatagactcaagccg
gttgagggcaagaaggacgatcccgctcaccctgcaatctatccaaccggagagcttcca
aagcccggtgatctcaccaaggatgagcagaacatctacgacctcgttgtgaggcgcttt
ctggcgctcttcatggagccggccgtaagggagacgatgaaggtcataataaactccaat
ggtcatcgcttcatccttagcggcgcgagaacggtcaaagagggctggctgaaggtttac
ggaaaatacgtcaagttcgacgaggtgattctgcccgctttcagggagggcgagccagtc
aaagtcctccagattaagcgcgagaagaagaagaccaaaccgccggcgcgctactcccct
gcggccgtcatcaagaggatggaagacctgggaattggcaccaaggcaacgcgcgcccag
atacttgaaaccctctacagcaggggctacatcgagggcaagaggaagataaaggtaact
cccctcggtatgcgcgttatcgaggctcttgagaagaacgtgcccgacatagtcagcgtt
gaactcacgagagccttcgaggagaagatggaggagataatggcggggaaagccagaaag
gatcaggtcatcgaggagagcaagaaccagctggtaaaaatccttcaggttttcaaggag
aaggaactcgacatcggcagaatcctgctcgaaacgaccggaactggcgcaactccatcg
aagtccaccgccagaaaggccggtgccgttaaggagatcagcgcggaggaagaggaggaa
gccaggaaaaccgtcgacggaaaggcggaagcccggaacgagaacgccgggaggccccag
agaaaggccctcgtcattggaaagtgccctaaatgtggcggcgacctcgtggtgcgctac
aacaggaagaccgggaagcgcttcgtcggctgctcgaactggcccaagtgcaacgtcacc
taccccctccttcagcgcggcgagataatacccacaaacaaaacctgctgcggcggagca
ccggtggtgaagatacgcgagaagggcagggaatacgagatatgcgttgacatgaactgc
agggactggaagaaggggaagaagtga
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