Thermococcus siculi: A3L11_09915
Help
Entry
A3L11_09915 CDS
T05103
Name
(GenBank) RNA helicase
KO
K03725
putative ATP-dependent RNA helicase [EC:3.6.4.-]
Organism
tsl
Thermococcus siculi
Brite
KEGG Orthology (KO) [BR:
tsl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tsl03019
]
A3L11_09915
Messenger RNA biogenesis [BR:
tsl03019
]
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Others
A3L11_09915
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF5814
DEAD
Helicase_C
ResIII
DUF4428
Motif
Other DBs
NCBI-ProteinID:
ASJ09529
UniProt:
A0A2Z2MMC2
LinkDB
All DBs
Position
complement(1862979..1865579)
Genome browser
AA seq
866 aa
AA seq
DB search
MLFVVRPGRKKNELEAFFIENEPEKLTQMKNLKADAIYRFIMREGRLFKVLEGSQYRNPK
EMEKLLRQSRIVLVNAGEWEDYFKRRLQNKRVEKAELCRLCLLEGKITVLTEGNRIKYRD
EYICERCAEDELKRELRFRFRSVAMFDQAKKLLERFRDLDKVLYAFDPRFDPTRHPEITK
WDELKAKHVRVERIKVDELPVPEKFREVIKSEGVKELLPVQSLAIRHGLLDGESLLVVSA
TASGKTLIGELAGVPKAMRGQKMLFLVPLVALANQKYEDFKRRYSRLGLRVAIRVGMSRI
KTKDELVVVDTGIDADIIVGTYEGIDYLLRAGRKIGNVGTIVIDEIHMLDDEERGPRLDG
LISRLRKLYPMAQFIGLSATIGNPEEMAEELGLKLVLYDERPVDLERHIIIARNESEKWR
HIAVLCRAEAMRKSKQGYKGQSIVFTFSRKRTHELAAYLTSKGLKAKPYHSGLPYRQRKL
TEMEFQAQMLDVVVTTAALGAGVDFPASQVIFESLAMGNKWLSVREFHQMLGRAGRPLYH
EKGKVYLIVEPGRKYSAQMESSEDEVAFKILTAPIEPVIVEWSDELEQDNVLAHSCVFNR
LDVIEEVQSRCLGANQNAERVLEKLAEFGFVRMKKPIVEVTPYGRAVSMSFLLPKEAAFI
RENLGKKPAQWIAVKLLPFENLYLSGTLQRELEGAVRGRLSANVFSPSFASILEELDRVI
PELSPNAAERLFTLYQEFFMCQEEDCTEYAMERVSDMIIELRRRGRHPTQIAEHFRKVYG
LIVYPGDVFTWLDGIVRKLEAIERIARVFRVRKTEEEAKLLRREIEEGRTIQGRDLKESY
RKPSNSRVQGNRASRNRQGMKRRRTG
NT seq
2601 nt
NT seq
+upstream
nt +downstream
nt
atgcttttcgtcgtgagacccgggaggaagaagaacgagcttgaggccttcttcatcgag
aacgagccggagaagctcactcaaatgaagaacctcaaagctgacgctatatatcgcttc
ataatgcgcgagggtaggctcttcaaggtccttgaaggcagccagtaccggaacccgaag
gagatggaaaaactcctccgccagtcgaggatagttctggtgaacgccggcgagtgggag
gactacttcaagaggagactccagaacaagcgtgttgagaaggcggaactctgccgcctc
tgccttcttgagggcaaaataaccgtcctcaccgaggggaaccgcataaagtaccgcgac
gaatacatatgcgagcgctgtgcggaagacgaactcaagagagaactccgcttccgcttc
aggagcgtcgccatgtttgaccaggcaaagaagctcctggagaggttcagggatttggat
aaagttctctacgccttcgacccgcgcttcgacccgacgaggcacccggagataaccaag
tgggacgagctgaaggcgaagcacgtcagggttgagcggattaaggtcgatgaacttccg
gttccggagaagttcagggaggtaatcaaatctgagggtgtaaaagaactccttccggtt
cagagcctggccatcaggcacggcctcctcgatggcgagagcctcctcgttgtctcggca
accgcgagcggaaaaactttaatcggcgagcttgcgggagttccaaaggcgatgaggggc
cagaagatgctcttcctcgttcccctcgtcgctttggcgaatcagaagtacgaggacttt
aagcgtagatattccaggctcggcctccgcgtggcgataagggttggaatgagccgcatc
aagacaaaggacgagcttgtggtggttgataccggcatagacgcggacataatcgtggga
acctacgagggcatagactacctcctccgcgcgggcaggaagataggaaacgtcgggacg
atagtcatcgacgagattcacatgctggacgacgaggagagaggaccccgcctggacggc
ctcatctcaaggttgagaaagctctatccaatggcccagttcataggtttgagcgccacc
ataggcaacccggaggagatggcggaggagctgggcctcaagctcgttctttacgacgag
agaccggttgatctggagaggcacatcatcatagcgaggaatgagagcgagaagtggagg
cacatagccgttctctgccgcgccgaggccatgagaaagtcaaaacagggctacaagggt
cagagcatagtcttcaccttctcaaggaagaggacgcacgagctggcggcttacctcacg
agcaaggggctgaaggcgaagccctaccactccggtttgccgtacaggcagaggaagctc
acggagatggagttccaggcccagatgctcgacgtcgttgtaaccaccgcggcacttggg
gcgggcgttgattttccagcgagtcaggtcatcttcgagagcctcgccatgggcaacaag
tggctctcagtcagggagttccaccagatgctcggaagggccggaaggccgctctaccac
gagaagggaaaggtctacctcatagtcgagcctggcagaaagtactccgcccagatggag
agttcggaggatgaggttgccttcaagattctaacggcgccgattgagccggtcatcgtt
gagtggagcgacgagcttgagcaggacaacgttctggcgcattcctgcgtcttcaacagg
ctggacgtcatcgaggaagttcagtccagatgtttgggcgccaaccagaatgccgagaga
gtccttgagaagctggccgagttcggcttcgtgaggatgaaaaaaccaatagttgaagtc
acgccctacggaagggccgtgagcatgagctttttgctccccaaagaggccgcctttatc
agggaaaacctcggaaagaagcctgcccaatggatagcggttaaactgctccccttcgag
aacctctacctcagcggtaccctccagagggagcttgagggggctgtcagaggaagattg
agcgcaaacgtcttctcgccgagctttgcctcgatcctggaggagctggacagggtgatt
cccgaactgagtcccaacgcggcggagagactcttcacgctctaccaggagttcttcatg
tgccaagaggaggactgcaccgagtatgcgatggagcgcgtcagcgacatgataatcgag
ctgaggagacgcggaaggcaccctacccagatagcggagcacttcaggaaggtctacggt
ctgatagtctaccccggcgacgtcttcacgtggctcgatggcattgtgagaaaactcgag
gccatagagaggatagcgagggtcttccgcgtgagaaaaaccgaggaggaggctaagctc
ctcaggcgcgagatcgaggagggcaggacgatacaagggagagacctgaaggagagttac
aggaagccctcaaactcccgggtccaggggaatagggcgtctcggaaccggcaggggatg
aaaagaaggaggactggctga
DBGET
integrated database retrieval system
