Trichinella spiralis: Tsp_00142
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Entry
Tsp_00142 CDS
T01609
Name
(RefSeq) vacuolar ATP synthase proteolipid subunit
Organism
tsp
Trichinella spiralis
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ATP-synt_C
adh_short
adh_short_C2
zf-CCCH
zf_CCCH_4
zf-CCCH_2
zf-CCCH_4
RelB_N
Motif
Other DBs
NCBI-GeneID:
10901434
NCBI-ProteinID:
XP_003375961
LinkDB
All DBs
Position
Unknown
AA seq
685 aa
AA seq
DB search
MTKHPHRVLHLRNGQPLVSMVFLCENVMAVTLKNNAKAEKQGDLSAVKFSYASSPLEDRK
TKGDDKLYQGINAYGGYIEKKDSAAGNAFSGVFCKGPLRAPEFVRRSVRWDYRPDICKDY
KETGFCGFGDSCIFLHDRSDYKHGWELERDWEKGRYGKDDEEHISRLGNKHNKEQDVSDS
EGLDAEDVVEVEGLAKAMDSNSRNEELGKDAVVRIIAEVPKRACKELRFYQLDISDKDSV
IRAKEYLMKEHGRIDILINNAGIAFKCNSTVPFGEQAYETMKVNYWGTKQVCEQFFPLLS
PHARVVIVASQLGLLKKISNEDLKKRLESAELKMENLNSIVNHFVESAKNNVHTDFGYPN
SAYAMSKIAVIAMTKILQREMDKDSREDIVVNACCPGYVATDMSSHKGTLTPDEGAETPL
FLALAVENSISGGGMYYLKKQVDWRTDCCKELEFYQSTTVKSLLSFASYCSVIHYIVMGR
VVATASTVGGVATAGITILSFYYLLTGKGHRVDFGWFLSNTSPQLWSSLGIAFAISLSVL
GAAWGIFLTGASIVGGGIKAPRIRTKNLVSIIFCEAVAIYGIIMAIVIGSKQQPFDPENA
SFRVLSTNLAAGYEMFGAGLTVGFANLFCGICVGIVGSGAALADAQNPSLFVKILIIEIF
ASAIGLFGVICGILITNSAKMGNDI
NT seq
2058 nt
NT seq
+upstream
nt +downstream
nt
atgaccaaacacccacacagagtgttgcatttaagaaacggtcaacctctcgtcagcatg
gtgtttctatgcgaaaacgttatggcagtgactttgaaaaacaatgcgaaagcagaaaaa
caaggcgatttatctgcagtaaaatttagttatgcaagcagtccgcttgaagataggaaa
acaaaaggcgatgataaactatatcagggtataaatgcttatggcggttacatagaaaag
aaggattctgctgcaggcaatgctttcagtggtgtattttgcaaaggtccattgagagct
cctgaatttgttagaagatccgttcgatgggattaccgcccagatatttgcaaagactac
aaagagacaggattttgtggttttggagattcttgcatatttttgcacgatcgttcagat
tacaagcatggttgggaattagaaagagattgggaaaaaggacgctatggaaaagatgat
gaagagcacatcagcagacttggtaacaagcataataaggagcaagacgtttccgattcg
gagggattagatgcagaagatgtagtcgaggtggaaggccttgctaaagcaatggactct
aattccagaaatgaggaattggggaaagatgctgttgtaagaataattgcagaagtgcca
aaacgtgcgtgtaaagaattgcgtttctatcagttggatattagtgacaaagatagtgtt
attcgggctaaagaatatttaatgaaagaacatggaagaatcgatattttaataaataat
gcaggaattgctttcaaatgtaacagcacagttccatttggagaacaggcttatgaaacg
atgaaggttaattattggggcacaaaacaagtttgtgaacagttttttccacttttatct
ccgcatgctagagtagtgattgttgccagtcaacttggccttctcaaaaaaataagcaat
gaagatttaaagaaacgcctcgaatctgctgaattaaaaatggaaaatttgaacagcatt
gtaaatcattttgttgaatctgcaaaaaataatgtgcatactgattttggttatccaaat
tctgcatatgctatgtccaaaatagccgttattgctatgactaagatattgcagagagaa
atggacaaagatagccgtgaagatattgtagtgaatgcgtgttgtcctggctatgtggct
actgacatgagtagtcacaaagggacattaacacctgatgaaggcgcagaaactccactc
tttcttgcattggctgtggaaaattctatttcaggtggaggcatgtattacttgaagaaa
caagttgattggagaactgattgctgtaaggaattggagttttatcaaagtaccactgtt
aaatctttattatcatttgcttcatactgtagtgtaattcattacatcgtgatggggagg
gtcgttgcaacagcttctaccgttggtggtgttgccaccgctggcataaccattttgagc
ttttactatctgttaactggtaaaggacaccgtgtagattttggatggtttctcagcaat
acgtctccacaactttggagcagtttgggaattgcgtttgccatttctcttagcgtcctc
ggagctgcatggggcatatttttgaccggtgctagcattgttggtggtggcattaaagca
cctcgaatacgaacgaagaatttggtgagcataattttctgcgaagcggttgcaatatat
ggcataattatggccattgtaattggcagtaaacagcagccatttgatccggaaaatgcg
tcttttcgagttttatcaaccaatcttgccgctggttatgagatgtttggcgctggtttg
acggtaggctttgctaacttattttgtggaatatgtgttggcattgttggcagtggtgct
gcgcttgccgacgctcaaaatccatctttatttgtgaaaattctcatcattgaaatattt
gccagtgctattggactttttggtgtaatttgtggaattttgattacgaacagtgcaaaa
atgggaaacgatatttga
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