Trichinella spiralis: Tsp_00177
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Entry
Tsp_00177 CDS
T01609
Name
(RefSeq) probable ATP-dependent RNA helicase DHX37
KO
K14780
ATP-dependent RNA helicase DHX37/DHR1 [EC:
3.6.4.13
]
Organism
tsp
Trichinella spiralis
Brite
KEGG Orthology (KO) [BR:
tsp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
tsp03009
]
Tsp_00177
Ribosome biogenesis [BR:
tsp03009
]
Eukaryotic type
90S particles
Helicases
Tsp_00177
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OB_NTP_bind
Helicase_C
HA2_C
DEAD
AAA_19
AAA_22
nSTAND3
ATPase
AAA_23
FtsK_SpoIIIE
SRP54
Motif
Other DBs
NCBI-GeneID:
10901470
NCBI-ProteinID:
XP_003375996
LinkDB
All DBs
Position
Unknown
AA seq
1103 aa
AA seq
DB search
MSRQISFNIGEIMSEEPTYILAHDTSNAFVLEPRKKQVNKSNKDASIKGVNISTKKKLKA
KCISKKKAKELKKILSRKRKNVDRNVIYEKLSRWKISDEEMKLLNSVSGLHEKLKRRKSD
LKFDEKIQSEELNYPAENGNFVNNNLIQYFETETSAENEKSEHDNHEYVQNNISNADISV
QEQSVKLAVSAESTVSSVIENKQSLKLVNNKTATYVPIYRQPDIEKQRLKLPVVAEEQVI
MEAIKECPVVIICGETGSGKTTQVPQFLYEAGMALNGKIIGITEPRRVAAISMSKRVAEE
MNVGVDVVSYQIRFEGNTTEHTKVKFMTDGVLLREIQKDFLLSNYSAILIDEAHERSMYS
DILIGLLSRIILLRQKRNDKLHLVIMSATLRVEDFLSPKLFKQTPRVIHVSSRQYPVTVY
FNRHTDEDYLAAAFRKVCQVHRLLPEGAILVFVSGQQEVYTLVSWLKKTFPMEGIRRNFS
MKSKRKRENYRPRNDTVINLDDYIIPADDKVDLNEMDAPDLDLFDTVEPKDDIILSDLKN
EEIPLYCLPLYSLMESKKQARIFEPIPEGCRLCIISTNVAETSITIPNVRYVVDTGKEKV
RLYDPVTGISKFVVHWISKASADQRAGRAGRVAPGHCYRLYSSAVYNEFEKYSTPEILTK
PPDDLVLQMKSMNILRVQNFPFPSPLSVEALQASEERLLKLDLLERQVDCKGKEVTKITN
LGRSVALFPLAPRYGKMLSLACQRNLLAHAVCLVAALSVREVLINPSSISAPNVEEKKKR
IKACLNCRRDLAGQGQSLLMGDFGVMLQSVLLAEKSNNLSGVCKSYSIRMKALLEIRKLR
RQLTNMINLIFPGIDLTLDQKLEIPNSERMILLRQLLLIGLCDNVARRNDAVSNNNRIAY
SSSVIKDHLWIHPSSTLVKLQPEWVVYQEVIDGCNEKKCMINVLAIEPDWLPKLAKGYCH
FGEPLKTIQPHYSAEQDCITCIVDCTYGVSGWFLSRLQVKHAENLDYYRYLAVEFLNGNV
FSKLQAYKKYLVTSPSIIFKPWAKIQTRTDRFLRALVNGKISSKADLIRVWSTEKKFLRS
EYLEWLIEAKHAEVMSIWPPLDK
NT seq
3312 nt
NT seq
+upstream
nt +downstream
nt
atgagcaggcaaatttcgtttaatataggagagattatgtcagaagaaccaacgtatatc
ttagcccacgataccagcaatgcttttgttctggaaccacgaaaaaaacaggtcaacaaa
tcaaataaagatgcctcaatcaaaggagtgaatatatcgacgaaaaagaaattaaaagcc
aaatgcatttcgaagaagaaagcaaaggaattaaaaaaaattttgtcacgtaaaagaaaa
aatgtcgatagaaatgtgatatacgagaagcttagtcgatggaaaataagcgatgaggaa
atgaaattgttgaattcagtttctggactgcacgaaaaattgaagagaagaaagagtgat
ttgaaatttgatgaaaagatacagtcagaagagcttaactaccctgcggaaaatggaaac
tttgtcaataataatcttattcagtattttgaaacagaaacttcagctgaaaatgaaaaa
tctgagcatgataatcatgagtatgttcaaaataatatttccaatgctgacatttctgtt
caagaacaaagtgtaaagttagctgtcagtgctgaaagtacagtttcatccgttattgaa
aacaagcaaagtctgaagttggtaaacaacaaaactgccacttatgttccgatttatcgt
caaccggatatagaaaagcagaggttgaaactgcctgttgttgcagaagagcaggtgatc
atggaagcaattaaagaatgccccgttgtaattatatgcggtgaaactggctctggaaaa
acaactcaagtgccacaatttttgtatgaagcaggtatggcactgaatggtaaaataatt
ggaataactgaacctcgtcgtgttgctgcgataagtatgtccaaacgggtggctgaagaa
atgaacgttggtgttgatgttgtttcttaccaaattcggtttgaaggaaacactactgaa
catacgaaagtgaaattcatgactgatggtgtattattgagggaaatacagaaagatttt
ttgctcagtaattattcagctattttgattgacgaggctcatgaaagaagcatgtatagt
gacattttgattggtttgctctccagaattattctgttacggcaaaagcgcaacgataag
ctgcatcttgttatcatgtcagctactttaagagtggaagactttttgtcacctaaactt
tttaagcaaacgcctcgtgtcattcatgtttcttctcgtcagtatccagtaacagtatac
ttcaatcgtcatacggatgaagattatttagcagctgcattcaggaaggtatgtcaggtg
catcgtcttttgccagaaggtgctatactagtatttgtatctggtcaacaagaagtttac
acattggtcagttggttgaagaaaacttttccaatggaaggaatacgtcggaatttttct
atgaagtctaagagaaagcgtgaaaattatagaccaagaaacgacactgtaatcaacttg
gatgattacataattccggctgatgataaagtagatttgaatgaaatggatgcaccggat
ttagatctgttcgacactgttgagccaaaagatgatattatactttcagatctgaaaaat
gaagagattccattatactgtttgccattgtattcactgatggaaagcaaaaaacaggca
agaattttcgaaccaattccagaaggatgtcgactttgtattatttctacaaacgtagct
gaaacttcaattacaattccaaacgtgcgttatgttgtggatacaggcaaagagaaagtg
cgcttatacgatccagtgacagggatttctaaatttgtagttcactggatatcgaaagcg
tctgcagatcagcgtgcaggtcgagccggtcgtgtagctcctggccactgctatcgtctg
tactcatctgctgtgtacaatgaatttgagaaatattcgacaccggaaattttgactaaa
cctccagatgacttagtattacaaatgaaatcgatgaatatactaagagttcaaaatttt
ccatttccgtcaccgttaagtgttgaagcgttgcaagcttccgaagagagattattgaaa
ttggatttgttggaaaggcaggttgattgcaaaggaaaagaagtgacaaagattacgaat
cttggtcgaagtgttgctttgtttccattagctccacgttatgggaaaatgttatccctt
gcgtgtcaaagaaatttgctagcccacgctgtttgcttggtggcagctctttctgtgaga
gaagttttaattaatcccagcagtatttctgccccgaacgtggaagaaaagaaaaagcgt
atcaaagcatgcttgaactgcagacgtgatttagctgggcaaggccaatcactgttgatg
ggcgattttggggtgatgcttcaaagtgtactgttggctgagaaaagtaacaacttgtca
ggagtttgtaaatcgtacagcattcgaatgaaagcgctgttggaaattcgcaaattacga
cgtcagttgacgaatatgattaatttaatatttcctgggatcgatttgactttagatcag
aaattagaaattccaaattctgaacgaatgattttgctgagacagttgttattaattggg
ttgtgtgataatgtagcacgaagaaacgatgcagtaagcaataataatagaattgcttac
tcatcttctgtaatcaaagatcatctttggattcatccgagttcaacattggtaaaatta
caaccagaatgggttgtttatcaagaagtgatcgacgggtgcaatgaaaagaaatgtatg
ataaatgtattagctattgagccagattggttgccaaaacttgctaaaggttattgtcat
tttggtgaaccactgaaaactatacaacctcactacagtgctgagcaagactgtatcact
tgtatcgtagattgtacgtatggcgttagcggttggtttttgtcacgcttgcaagtgaaa
catgcggaaaatttagattattaccgatatttggcggtggaatttttgaatggaaatgta
ttttcaaagttgcaagcttacaagaagtatcttgtaacgtcgccttcgattatttttaaa
ccatgggctaagattcagaccagaaccgacagattcctcagagctttggttaacgggaaa
atatcaagcaaagcagatttgatacgcgtttggtcgacggaaaaaaaatttctccgcagt
gaatatctggaatggcttattgaagcgaagcatgcagaagtgatgtctatttggcctcca
ctggataaataa
DBGET
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