Trichinella spiralis: Tsp_01878
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Entry
Tsp_01878 CDS
T01609
Name
(RefSeq) putative neurotransmitter-gated ion-channel ligand binding domain protein
Organism
tsp
Trichinella spiralis
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Neur_chan_LBD
COX6C
Neur_chan_memb
Motif
Other DBs
NCBI-GeneID:
10912274
NCBI-ProteinID:
XP_003377690
LinkDB
All DBs
Position
Unknown
AA seq
538 aa
AA seq
DB search
MRQRESNPMSSARQAINMSIAKPQLRNLNGMFMRKVIISGIAFSMGLGFTIWHLICIPRH
NRQLEYMKNADIYKMVEHMCSKNLLQSCPQNLADRLKEAGKLKLLTMFIDFIMRDSTNEN
ITDLLPYQEILNGLERSLLETYNHHHRPVKDENQGLIVLFFAVIQHIEEVNEEHQTMTVH
GFQYLLWNDEYLSWNPEQFNGVNRLLMHSWHIWKPDLILYNAAGQADDSIRYTFYQHSWV
ESNGRVEHFPMFRYKASCKFDFTDYPYDVQSCPVILGSWNYNLKELDIRPLDRKPMLNLF
WEDEKVIVSGWKVIDVHMNVSFWNAMTDQERSQWPPEEEHALHFPLIYIWIKMERYAPHF
TISVLLPTLVTSFITVITFSMASFNKAVVLLAFNLLLQTVLAEDMLSQLPSSSASIPRIV
KYFAFNLTATVFAMMSLVVIETVRHVGHGVNHCRILETLWSRFSFRRSTSSGATVGVETT
EDPSSTDTSALNKENSRPRSTWAWRILSPNSDTLNVIKISLAIALTTLYLIMMIAYLR
NT seq
1617 nt
NT seq
+upstream
nt +downstream
nt
atgaggcagcgagaatcgaaccctatgagttcagcacgtcaagctataaatatgtcgatt
gcgaagccacagttgcgtaatctgaatggaatgtttatgcgcaaagtaattatttctgga
atcgcattttctatgggtttgggtttcacaatttggcatttgatttgcattcctcgccac
aatcgacaacttgaatatatgaaaaatgctgatatatacaagatggtagaacacatgtgt
tcgaagaatttgttgcaatcttgcccgcagaatttggccgatcgtttaaaagaagctggg
aaactaaagctgctgacaatgttcattgattttatcatgcgagattcaacaaatgagaac
attactgatttgttgccgtatcaagaaattttgaatggacttgaacgatcacttctcgaa
acctacaaccatcaccacagaccagtgaaagatgaaaatcaaggattaattgttttattt
tttgccgtcatacagcacatcgaagaagtgaatgaagaacatcaaacgatgacggtgcac
ggctttcagtatttgttgtggaacgatgaatatctctcttggaatccagaacaattcaac
ggagtcaacagactgctcatgcattcgtggcatatttggaaacctgatctgattctttac
aacgcagcagggcaagcggacgattcaattcgttacactttttatcaacattcctgggtg
gagtccaatggtcgagtggaacattttccgatgttcaggtacaaagcgtcgtgcaaattt
gatttcaccgactatccatacgatgttcaatcatgcccggtgatacttggatcttggaat
tacaatctgaaggaattggatattcgtcctttggatcgaaagccgatgttgaatcttttt
tgggaagatgaaaaagtgatcgtaagcggttggaaggtgattgatgtacacatgaacgtc
agcttttggaatgcgatgaccgatcaagaacgaagccaatggccaccggaagaagagcac
gcgttgcattttccactgatttacatttggatcaaaatggaacgctacgcaccacacttt
acaatatccgtactattgccaacgctggtaacctctttcataaccgtgatcacattttcc
atggcatcgttcaacaaggctgtagtactgcttgcgttcaatcttttgctgcaaaccgtc
ttagccgaggacatgctatctcagttaccgtctagttcagccagcatccctcgaatcgtt
aaatattttgccttcaatctgaccgcaactgtgtttgccatgatgtcgttggtggtgatt
gagacggtgcgccacgttggccacggtgtgaaccactgccggatattggaaacgctctgg
tctcgcttctctttccggagaagcacgtcgtccggtgcgaccgttggcgttgaaacaact
gaagatccgtcgtcgaccgacacatccgcgttgaataaggaaaattcacgaccgcgaagt
acatgggcgtggcggatattgtccccgaacagcgacacgttgaatgtgatcaaaattagc
ttggcaatagcactgacaacgttgtatttgataatgatgattgcctacttgcgctaa
DBGET
integrated database retrieval system