Trichinella spiralis: Tsp_02630 Help Entry Tsp_02630         CDS       T01609                                  Name (RefSeq) putative HECT-domain protein   KO K10590   E3 ubiquitin-protein ligase TRIP12 [EC:2.3.2.26] Organism tsp  Trichinella spiralis Pathway tsp04120   Ubiquitin mediated proteolysis Brite KEGG Orthology (KO) [BR:tsp00001]  09120 Genetic Information Processing   09123 Folding, sorting and degradation    04120 Ubiquitin mediated proteolysis     Tsp_02630  09180 Brite Hierarchies   09182 Protein families: genetic information processing    04121 Ubiquitin system [BR:tsp04121]     Tsp_02630 Enzymes [BR:tsp01000]  2. Transferases   2.3  Acyltransferases    2.3.2  Aminoacyltransferases     2.3.2.26  HECT-type E3 ubiquitin transferase      Tsp_02630 Ubiquitin system [BR:tsp04121]  Ubiquitin ligases (E3)   HECT type E3    Tsp_02630 BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  HECT WWE TFIIA HEAT_2 Motif Other DBs NCBI-GeneID:  10899085 NCBI-ProteinID:  XP_003378956 LinkDB All DBs Position Unknown AA seq 1980 aa AA seqDB search MIKLELIKNGEVCGRLTFAKLAVVNKCDRRQGDTFCRTQQQQQQQQQQQQQQQLPLPTTS GVQKSKSSRLSNRQAQTQSASHTSKTDLNEMESNSRSQGGKKKGKAQKPNATKSGHATSS AASDANNPANTSDPNFNTDLRTSYASILGTFGPRVTNLLLRGSSSGNERIESLLSSMQKH EDSSTQLQALIELCNILVMSNEETLGSNFPFKELIRVLTRLLQTEHNFDIMTHACRALTY LMEASPRIGSALMDAVPCLLSKLQRVECIDVAEQALTALELLSRRLGKNILNANGIECCL MFIDFFPLASQRSALHIVSNCCYHLTEKDFDYLANSLPILTQRLKSQDKKTVELMCVTFA RLVENLIHSPDKIQKICEHGLLSNIQQMLIAVPPVISSGTLVNVIRMMHLICRSCPTLTV SLVSSSFVFILRFLLTGSTEEKSDSRELLSRTPQEMYELVLLIGELLPSLPTEGLFEVDS LLQPHGNIGDAATWSFKDERGVWRSYSHSDSRVLELAYQTKEEEISLSILGQSYVIDLIQ MTQICEETGSSLPIQRKPKEINAQSGTSNANVVTPENDPRVVLLKDAPIHYEEIVQSIFP LLYDIYSSVGGSAVRHECLRCFLKMIYHGNVKMIDHILETVPISNLIAGLLCSHDFKSIV CALQLAKVLLEKKRKYFTVCFQREGVTNHLKNLSAHLKQANAFTIAYGDTTDLSARFGLQ MAGSGIAGAGAGAPGGGSSSFTGFSTAPNYSPMLESLMMNGARVIPLSGSGRNLSLSFPF FGSPSSGSGSSQRRVSLNSLFGFASGTLGSRATSPTFSLSEQLEASAANTAMALAGASSS AAVGVAGSMFSYSADERQLIQAAGSSLAVLPTTVAGSTSGSANASAILANHQQQQLHHHL NQQQQQQQQQQQQQQQQQQQQQQQHQQQQQQSQQSTAKNTRGRGRMKKSSTPGFSSGEVR SNPRGGSPLRKTVSTARGSGNFLGSIGLHRWNTRSGFGALKPPTPPLSSSNTVAHHHHHH HHHHHSTVLHSNDSQSQEFLSSHANYWKSISDKVSAWAEVTAKALLDDYFKEGDGSGVAN YYGQATAKKLCEIAQKFAEKADEGFDDLVEVLHSDVTCYELLQSGLIEELSKYLTQGNWQ HALPNRLRLFCSKLFGVRVTAPTESEVPEVFIEDEESGKRLITMLVMCISQLEQFPVKTH DLSWGQSGGGLRGLNAFRFLHSQQIKCQPVRHPSETKLRQWKRGVIKVDPLCPISTIERY LILKGYGKPKTNPGDDDSSNDEEDGTELTEDDAEALLNVASIANGVHRLQLLIHDRVLPY DMTIFQALRQYGGKSSNVTSDGLVVSEWIGPDMWMATNRIAYKLLPENDTSGGGGGGSAG SSKEAASTSGVSGSCGASSTTGAGTSRGRRGGKGSGGGKKRSPTAASNATPVYKEPENIL LAQLKQPMNVTTYDPCLKALGLLRVVFSIARYWWILYEKSALVRCSAPLVPLTAFHVSKI AAKISRQLQDPLIILSDHLPYWVEQVAYHCPFILPFDVRRSLFNVVALDHDRALQHLLES AGESSSYNSADRLAPRLERRKVCIPRQNILKQAETVFNNMNHSRAVLEVQYENEVGSGLG PTLEFYALVAHNLQRADLHLWRGTVNRDRPLAEGVNEYIHSDTGLFPDLLNPGNSEEVIR RFRLCGKLLSRALLDGRVLDIPLNVLFFKWLLQEEKFLCATDFNDLDPAFAASMHFLKTL LLKGRLGSEESRERVRAEIEDMQIDFVVPGRENVELKPGGKNIALTLENLSEYIDLVAFW MLHAGVVRQMDALRESFGSIIQLKCLKMFLPEEVGSKLCTREIHLVVVMELLISGCNDST DTWEVQSLLQAIHPDHGYTPESPQIRWLAEIMSNYTLKERRDFLQFLIGSPRLPVGGLKH LNPPFTVVRKLCDCGNTDKLLPSVMTCVNYLKLPEYSDRELMRERIRTAVEYGRYAFHLS NT seq 5943 nt NT seq  +upstreamnt  +downstreamnt atgatcaagttagaattgataaaaaatggtgaagtctgcggccgtttgacatttgcgaaa ttagctgttgtaaacaagtgtgataggcgtcaaggcgatactttttgtagaacacaacaa caacaacaacaacaacagcagcagcagcagcaacagcaactgcccctacccactacgtct ggagtacagaagagcaaatcttctcgattaagcaacagacaagcgcagacacagtctgca tcgcatacgtcgaaaacagatttgaacgaaatggaaagtaacagtcgttcacaaggtggc aaaaagaaagggaaagcgcagaagccgaacgcaaccaaaagtggtcatgccacgtcgtcg gccgcaagcgacgctaacaatcccgcgaacacgtccgatccaaattttaacactgatttg cgcacaagctacgcaagtattcttggcacttttggtcccagagtgacgaatctgctgctt cgaggatcttcgtctggaaatgaacgaatcgaatcattgttgtcaagcatgcagaagcac gaggactcttcaactcagttgcaagctcttattgaactgtgcaatatacttgtgatgagt aacgaagaaacacttggttccaattttcctttcaaagagttgatccgagtgttgacccga cttttgcaaactgaacacaactttgatattatgacgcacgcatgtcgtgctttgacttat ctcatggaagcgtcgccccgaataggtagtgctttgatggatgcagtgccatgtcttttg tcaaaattgcaacgtgtggaatgtatcgacgtcgctgaacaagcactcactgcgctggaa ttgctctctcgtcgattggggaaaaatatactgaatgcgaatggcatcgaatgttgtttg atgtttattgatttctttccgctcgcttcccaacggtcggcgttgcatattgtgtcaaac tgctgctatcatttaactgaaaaagattttgattatttggccaactctttgcccattcta actcaacgtttgaaaagccaggacaaaaaaactgttgagttgatgtgcgtcacatttgcg cggttggtggaaaatttaatccattctccggataaaattcagaaaatatgcgaacatggt ttgttgagcaatattcaacaaatgttgattgctgttccgccggtgataagttccggaact ttggtaaatgttatccgaatgatgcacttgatatgccgtagttgtccgacgttgaccgtt tctctcgtcagttccagttttgtttttattttgcgatttttgctaactggcagtacggag gaaaagtctgacagtcgagagttgttgagtcgaacaccacaagaaatgtacgaactggtg ttgctgattggtgaattacttccatcgttgccgacagaaggtttgtttgaagtggattca ttgttgcaaccgcacggaaacattggtgacgcggccacttggtcatttaaagatgagcga ggcgtttggcgttcttattctcattccgatagccgcgttttggaactagcatatcagaca aaagaggaagagattagtttgagcattcttggccagtcgtacgtgatcgatttgatacag atgacacaaatttgtgaagaaacaggctcttctttgccaattcaacgaaagccgaaagaa attaatgcacaaagtggcacgagcaatgcaaatgtggtcactcctgaaaatgatccacga gttgtattgctgaaagacgcgcccattcattatgaagagattgtgcagagcattttccca ttgctctatgatatttactcgtccgtgggtggatcggctgttcgccatgaatgcttgcga tgctttctgaaaatgatctatcatggcaatgtgaagatgatcgatcacattttggaaact gttccaatttcaaatttaattgccggcttgttgtgttctcacgatttcaaatcgatcgtt tgcgccttgcagttggcgaaagttttgttggaaaagaagcgaaaatattttacagtctgc ttccaacgggaaggtgttacgaatcatttgaaaaatctcagcgcccatttgaagcaggcc aacgcgttcaccattgcctacggtgacactacggacttgagcgcccgattcggcttgcag atggccggaagcggcatagccggagccggagccggagctccaggagggggtagtagtagt tttactggcttttcaacagcccccaactattcgccaatgttggagtcgttgatgatgaac ggagcacgtgtgataccgttgagtggctctggaagaaatttgtcactgtcatttccgttt tttggcagtccaagcagtggcagtggcagcagtcaacggcgagtcagtttgaacagcctg tttggttttgcgtcaggaactcttggctctcgcgccacttcacccaccttcagcttgagt gaacagctagaggcgagtgctgctaatacggcaatggctttggcaggagccagttcctcg gccgcagttggagtcgccggcagcatgttttcttattcagccgacgaaagacaactcatt caagctgctggttcgtcgttggcggtattaccaacaacagttgccggtagcacgtcggga tcggctaatgcaagtgcaattctggcgaatcatcaacaacaacagcttcaccatcatctc aatcagcagcagcagcagcaacaacaacaacaacaacaacaacagcaacaacaacaacag caacagcaacagcaccaacagcagcaacaacagtcgcaacagtcgactgcgaaaaataca agaggacgtggtcgaatgaagaagtcttcaacgcccggtttcagtagtggagaagttcga agtaatcctcgaggaggatcacctctgcgcaagacggtgtcgacggcacgaggttctgga aactttttgggaagcatcggtttgcatcgttggaacacccgcagtggctttggggctttg aagccaccgacgccacctctttcttcttcgaatactgttgctcatcatcatcatcaccat catcatcatcatcattcgacagtgctgcattcgaatgattcgcaatctcaggaattcctc tcaagccacgctaattattggaagtcgatttcggataaagtatcggcttgggctgaagtt acagcgaaagctctgctggatgattatttcaaagaaggggatggaagtggtgttgcaaat tactacggtcaagcaactgccaagaagctttgcgaaatagctcaaaagtttgccgaaaaa gcggacgaaggtttcgacgatctggtcgaagttttgcattctgacgtcacctgctacgaa ttgctccagagtggtttgatcgaagaactgtccaaatatttgacgcagggaaattggcag cacgcgttgccgaatcgcctgcgactgttctgttccaaattgttcggcgtgagagtcaca gcgcccacggaaagcgaagtgccggaagtgttcatcgaagacgaagaaagcggaaaacgt ctgatcaccatgttggtgatgtgcatcagccagctcgaacagtttccggtcaaaacgcac gatttgtcctggggtcagagtggtggcggtttgcggggcttgaacgcgtttcgctttttg cacagtcagcagatcaagtgccaaccagtgcgacatccgtctgaaacgaaactgcgccag tggaaacggggcgtgatcaaagtggatccactgtgtccgatatcgaccatcgagcggtac ttgattttgaaaggttacggtaagccgaagacgaatcccggcgacgacgattcgagcaac gacgaagaagacggcaccgagttgaccgaagacgatgccgaggcgcttttgaacgtcgcc agcatagccaacggtgtgcaccggctgcagcttctcatccacgaccgggttttgccgtac gatatgaccattttccaggcgcttcgtcagtacggcggaaaatcgtcgaacgtcacttct gacggtctggtcgtttccgagtggattgggccggacatgtggatggcgaccaatcgtatt gcgtacaaattgttgcccgaaaacgacaccagtggtggtggtggtggtggatcggccggc agtagtaaagaagcggcatcgaccagtggtgtgagcggtagttgcggcgcttcgtcgacc accggggcgggaacgtctcgcggcaggcgagggggcaaagggagcggcggtggcaagaaa cgttcgccgacggcggcttccaacgccacgccggtctacaaggagccggaaaatattctg ctcgcccagttgaaacagccaatgaacgtgaccacgtacgacccttgcttgaaagcgctc ggcctgttgcgcgtagtattcagcatcgctcgttactggtggatattgtacgaaaagagc gcgctggtccgctgttcggcgccacttgtaccgctgactgcgtttcacgtttccaaaatt gccgccaaaatcagccgccaactccaagatccgttgatcatcttgtccgaccacttgccc tactgggtcgagcaggtcgcctaccattgtccatttattctaccgttcgacgtgcgtcga tcgctgttcaacgtcgtcgccctcgaccacgaccgtgctctgcagcatttgctcgaaagc gccggcgagtccagctcttacaacagtgcggaccgactggcgccacgcctcgaacgtcgc aaagtctgcataccgaggcagaatattttgaaacaagccgagaccgtgttcaacaacatg aaccattcgcgtgcggtgttggaagtccagtatgaaaacgaagtcggctccggtttggga ccgacgttggaattttacgctctggtcgcgcacaacttgcaacgcgccgacttgcacctc tggagaggaaccgtgaaccgagaccgaccactggccgaaggggtcaacgagtatatccac agcgacaccggcctgtttccggacctgctgaatcccggcaacagcgaagaggtgattcgg cggttccgtctgtgcggcaaactgctcagtcgtgcactgctcgacggccgagtgttggac atcccgttgaacgtgctgtttttcaagtggcttttgcaagaggagaaatttctctgcgcc accgactttaacgacttggatccggcatttgccgcgtcgatgcactttttgaaaacgttg ctcttgaaaggacggctcggatcggaagagtcgcgcgaacgagttcgagcagagatcgag gatatgcaaatcgatttcgtcgtgcctggtcgtgagaatgttgaactgaaacccggtggc aagaatatcgcgttgactttggaaaatttgtccgaatacattgaccttgttgcattttgg atgctgcacgccggtgttgttcgacaaatggacgctttgagagaaagtttcggttcaatt attcaactgaaatgtttgaaaatgttccttcctgaagaggttggtagtaaattgtgcacg cgcgagattcatctcgtcgtcgtcatggagttgttgatttccgggtgtaacgacagtacc gatacttgggaagtgcaatcgttgcttcaagcaattcatcctgaccacggatacactcca gaatcaccccagatacgctggctggcggaaattatgtcaaattatacgctgaaagaacgt cgggattttttgcagtttttgattggatcgccacgactgccagtaggaggtttgaaacat ttgaatccaccttttacggtggtacgcaaattgtgcgactgtggaaatacggacaagttg cttccttcggtgatgacctgcgtaaattacttgaagttgcctgaatattctgaccgtgaa ttgatgcgtgaacgtatccgcaccgcagttgaatacggcagatatgcatttcatctttca tga

DBGET integrated database retrieval system