Trichinella spiralis: Tsp_02950
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Entry
Tsp_02950 CDS
T01609
Name
(RefSeq) hypothetical protein
Organism
tsp
Trichinella spiralis
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-piccolo
IBR
Motif
Other DBs
NCBI-GeneID:
10900062
NCBI-ProteinID:
XP_003379284
LinkDB
All DBs
Position
Unknown
AA seq
1410 aa
AA seq
DB search
MKCGDSKHFRMFVCVLVRRLRAEVPGIRTGAVNKDAAHWLVRIDRFTNVYRLLEWEFDWL
PPFPPAGSVEAAVIERFILPRKVISKKTRIKNLDEMFGKVFGGITHAVSHTASQLRTQVL
APQFNATVDPLAGLSEVERAHILAVQRRAADEDSKLSQQPMVLPRSTASTVDATASLPPP
SLAPSTLPSRPSSASSTETEGADDTSDDDDDDSGPIPDLDQIGLSEVTPADMRLDGLAEI
GQERLLTSQESIEEQPTIVVHSPSTNSNGAVDESDANELEREEAEDERQQQHADEEHEED
SLDELEHYSSPESDTQDVVEPVVQIPGDQEDLQLAATGGGDESPSSSGDEWNCEYAGESF
TAPIRKSIEVDEPTTTPQSNERPIYQTEPAASSPPPAADTTASSLFNYDQTDPTEWTNVE
PLLQTQEIELSSNETDQSVMNKASGVEMDEEASSQTFYGDESSNPFLDGASFADDQAISE
LVPVEEPDEEVDEEKFNNDNEQQLAIDASVDEQLSTALAEPIPSSDDDTFGVDEKIISQA
EKTFATVADHADSFGISNIAVAASSAVIERQTRRSLTETTSRSVKQPFSMPAASQAKLQS
ANKIASATLDGFGGKSLKNFGGLFSRPKVDFSSFATSVKKSTEAALKKATDSVASSFSSS
SVVSMSQDSFNSNNQPCTVPPKSPSSSAINADNALANSNKSSDQWSALEVDKADNNNNSS
AMMKSTAATVVGKKGIQPSPVVSNTFRVSCNSDSTEDTGYSSRCSPEDEFYRVGSDGAQF
LITYDSSRKLGVDTVKAPLSPRRRINPFIEDGIFSQRLITSVIVEQADDQLTKSFHVSGQ
KRQLDIVEKVEPGEQEKFHLIAEQSFWSSEPLQSQQLFGEIDGPQEISQAGKDSTPKIEE
VETLPLPSESTPLKYPPQQSIATSGADEITKLFTVEDSAPDSSACTQMYDSSEVSSEQFD
EDAQKRITEIESEFLLQNNQSADSVEDWQMCPLCQMAEVHVRPDGVSINGQPCGNCGLTV
CSKCGHVVEQNGLLIASFLLFFFLIRVAKYGYVAYAIQILPKPMVAGIVMVMPDRDAYAF
CVYWFTTKSKAISEDDNSKLTFEKSQEVDSDISDQASDSSDSYPDVVIEVPSSPVKQLDF
DQEFSTSNSKQCYKVFRDIEKHFMNNFDQCDDTKHEGKVDHHDQHTGHFDKGNFETDPFK
TVPISVGQSPTFEKLTEQASPSDVQLSIGEEIFGKIVPPEQSCQSTNSNNAQEDSIDYAQ
AMRYYNTQPFYIHRPGPVYTILEDDEEVMELNQDAISASRSSTLSSSSSKSQLTSFSSPL
PNSYVGLDRPAQQMQTSGNASTEQLTSTVSSDVLVQHFFATSTTSTTTTSITASKSHTLT
AVQQSNSTFTPKPVRIAPPPPPPSQYSISR
NT seq
4233 nt
NT seq
+upstream
nt +downstream
nt
atgaaatgcggtgattccaagcattttaggatgtttgtatgtgttttggtcagacggttg
agggcagaggttccaggcattcggactggagcagtgaataaagatgccgcacactggctt
gtgcgcatcgatcgattcacaaacgtctaccgactactcgaatgggagttcgactggctg
ccaccatttccgccagccggctctgtcgaagcagccgtcattgagcgcttcattctgccc
agaaaagtaataagcaaaaaaacaagaatcaaaaacttggacgagatgtttggcaaagtg
ttcggtggtatcactcacgcggtcagtcatacggccagtcaactgcggacgcaggtattg
gcacctcagtttaatgcgacggtggatccgttggcgggtctgtccgaagttgaacgggcg
cacattttggctgtgcaaaggcgcgctgcggatgaagattccaaactgtcgcaacagcct
atggtgctgcctaggtcgaccgcttccactgttgacgcgactgcatcgttgccgccacca
tcactggcaccatcgaccttgccatctcgtccttcgtctgcctcgtccactgaaaccgaa
ggtgccgatgatacatccgacgatgacgacgacgacagtggaccaattcctgatctggat
caaatcggcttgagtgaagtgacgccggccgatatgcggctagacggactcgctgaaatt
ggacaagagcggctattgaccagtcaggaatctattgaagagcagccgaccattgttgtc
cactcgccgtcgaccaattccaacggtgctgttgatgaaagcgatgcaaatgaactagaa
cgagaagaagcggaagatgaaagacagcaacaacatgcagatgaagaacatgaggaagat
agtcttgacgaacttgagcattattcgtctcctgaatcggatacacaagacgtcgttgaa
ccagtagtgcaaataccgggcgatcaggaagatttgcagcttgctgccactggtgggggt
gacgaatctccgtcgtccagtggtgacgagtggaactgcgaatatgcgggtgaatctttt
acggcgccgattcggaaaagcatcgaagtcgacgaaccaaccacaaccccccagtcgaat
gagaggccaatttaccaaaccgaaccagcggcttcgagtccaccgcccgcggccgacact
actgcttcatcacttttcaattacgatcaaaccgacccaaccgaatggacaaacgttgaa
ccacttttgcaaacccaagagattgaactctcttcaaacgaaacggatcaaagcgttatg
aataaagcgtcgggcgttgaaatggacgaagaagcatcaagccaaacgttttacggggat
gaaagttcgaatccgtttttagacggtgcatcttttgccgatgatcaagctatttctgaa
ttagtgcctgtggaagaaccggatgaagaagttgatgaagaaaaatttaataatgataat
gaacaacaattagctatcgatgcttctgttgatgagcagctttctacggcattagctgaa
ccaataccgtctagtgatgatgatacgttcggagtggatgagaaaattatttcacaagcg
gaaaaaacatttgcaactgtagccgaccatgctgacagctttggaatatccaatattgcc
gttgctgcatcgagtgcagtaattgaacgtcaaaccagacgttccctaacagaaacgact
agtcgctctgtcaaacaaccgttcagcatgccggcagcgtcgcaagctaagctccaatct
gcaaataaaatagcatctgcaacgttggacggctttggtggaaaatcgttgaaaaatttc
ggtggcttgttcagccggccgaaggtcgatttttccagcttcgccacgtcggtcaagaaa
agcactgaagctgctttgaaaaaggcaaccgattcggtcgcctcgtccttctcctcatcc
agcgtcgtctccatgtctcaagattcattcaacagcaacaaccagccgtgtacagttcca
ccaaaatcaccctcgtcgtcggccatcaatgccgacaacgctttggctaacagcaacaag
tcatctgaccaatggtcggcattggaagtcgataaagctgacaacaacaacaacagttcg
gctatgatgaaatcaacggcggcaacggttgttggcaaaaagggaattcagcctagtccc
gtggtttcgaacacgtttcgcgtatcctgtaacagtgattcgaccgaagacacaggatac
agtagccgttgcagtccggaagatgaattttacagagtgggaagtgacggggctcagttc
ctgatcacctacgacagcagtcgtaaattgggcgttgatacggtgaaagctccgctaagt
cccagacggaggatcaacccgttcatcgaagatggcattttttcgcagaggttgattact
tctgtgattgtcgaacaagctgatgatcagttgacaaaatcgtttcacgtcagcggccaa
aagcgccagttggacattgtggaaaaagttgaaccaggcgagcaggaaaagttccatttg
atcgctgaacagagtttctggtcttctgagcctctacaatcgcagcaactgttcggagaa
atagatgggccccaagaaatatcccaagcgggcaaggattccactcctaaaattgaagaa
gttgaaaccctacctctgcctagcgagtcgacacctttgaaatatccaccgcaacagtcc
atagcgaccagtggtgcagatgaaattacaaaattgttcaccgttgaagattctgcaccg
gactcgtcagcatgcacgcaaatgtacgacagcagtgaggtatccagcgaacagttcgac
gaagatgcccaaaaaagaataacagaaattgaatctgaatttttgttgcaaaataatcaa
tcagcagattcagtcgaggattggcagatgtgtccattatgccagatggccgaagtccac
gtacgtcctgatggcgttagcatcaatggtcagccatgcggcaactgtggtttgactgtg
tgttcgaaatgtggtcatgttgtcgaacaaaatgggttactcattgcttcatttcttttg
tttttctttttgattagagtcgcaaagtatggttatgtggcatatgcgattcaaatattg
ccgaaaccaatggtcgctggtattgtgatggtaatgcccgatcgcgatgcatatgcattt
tgcgtttattggttcacgacgaaatcaaaagccatttctgaagatgataattcgaaactg
acgtttgaaaaatctcaggaagttgattcggatatttccgatcaagctagtgattcttct
gacagttatccggacgtggtcattgaagtaccctcgtcgccagtgaagcagctcgatttt
gatcaagaattttctaccagcaattccaaacaatgctataaagtgtttcgagatattgaa
aaacattttatgaataatttcgatcagtgtgacgatactaagcacgaggggaaagtcgat
catcatgatcaacacaccggacattttgataaaggaaattttgaaacggatccgttcaaa
accgtaccaataagcgtagggcagtcgccgacttttgaaaaattaaccgaacaagcttct
cccagtgatgttcaactcagcataggcgaggaaatatttggcaaaattgttccaccagag
cagagttgtcaaagtactaacagcaataatgcccaagaagattcgatagactatgcgcag
gcgatgcgctattacaatacacaaccattttatatccatcgccctggacctgtttacaca
attttggaagatgacgaagaagtcatggagcttaatcaagatgcaatttctgcctctcgg
tcatccacgcttagcagttcatcgtcgaaatcacagctgaccagcttttcttctcctctg
ccaaacagttatgttggtcttgatcgtcccgctcaacagatgcaaacttccggcaatgca
agcactgaacaattgacttcgaccgtgagttctgatgttcttgtacaacatttttttgcg
acttcaaccacctctacaactacaacttcaatcactgctagcaagtcgcatacactaaca
gcagtgcaacaaagtaacagcactttcacaccaaagccagttcgaatagctccacctcct
cctccgccgagccaatattcgatttcaaggtga
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