Trichinella spiralis: Tsp_04853 Help Entry Tsp_04853         CDS       T01609                                  Name (RefSeq) putative cadherin domain protein   KO K16507   protocadherin-16/23 Organism tsp  Trichinella spiralis Pathway tsp04392   Hippo signaling pathway - multiple species Brite KEGG Orthology (KO) [BR:tsp00001]  09130 Environmental Information Processing   09132 Signal transduction    04392 Hippo signaling pathway - multiple species     Tsp_04853  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    04515 Cell adhesion molecules [BR:tsp04515]     Tsp_04853 Cell adhesion molecules [BR:tsp04515]  Cadherins   Cadherin related    Tsp_04853 BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  Cadherin Cadherin_3 RET_CLD1 DUF2812 TSP_Ig-like Motif Other DBs NCBI-GeneID:  10912714 NCBI-ProteinID:  XP_003369438 LinkDB All DBs Position Unknown AA seq 2240 aa AA seqDB search MHDIVVSAFDGGGLSSSAVIRVSVEDVNDNYPTFYPLVYNVSLRQSVLPGTPVLVVSATD LDSGLFGEVNYIISSGNDGESFRIEPHSGELYVNAKLFPTVYQLKIKAVDGGNFASPQMA TVTVTVLTENFPSPYFEEKFYRFTVREDALPGISVGRVVAHGQGSIAYHIYSGDPNGYFS IDGNTGEITVSKYLDHEERSVILLNIQAVLGYPPSYNHSQVQVIVEDINDNAPLFDQSYA EISVMEDHEVGIALYTAKATDRDSGLNGQIRYRLSVNPENTFMIHPVSGEIRLNHNRAFD YEKRKNYTLVITAQDGGIPSFTTEMTLLIFVLDANDHSPEFLQKIYRSAVYENAPLMTKI FQLKAIDLDHGTNSQIMFKIDPNQETALNQTLEYFDVYADSGWIYVRKTLDREMIPEFSF VVTVRDNGEPKRSSTATVFIKVLDVNDNAPIFESAAYEFSVEENQPKGTFVGQVVAHDAD FGLNGTVRYRLDSEQVKIFHVSLDGKLITSGVLDYELTDLYELQIIAYDGGIPSLSTTCK VIVHVKDVNDNAPFFILPTRQDNILFREEQSSGTEVIQVQARDPDSGRNGTVRYRLDAES STPPMPFRINRRTGIIYSTEVLDYEKGPTIYKVTVIAEDWGKPILSSKKCITIELVDIED GSSYADDNETSTFELSESVPVGTNIGSVDSERIGYLKNSKDNNSPITLEQLVDISYSISS GNSMGIFDIDPFTGALFTVRRLDYEMTNMHFLTVTRTNTSQTTFPRIKEFPIKIHVLDEN DNRPVFSDDPVIFSLPENTPVGTDIWMYNATDADTGKFGRLKYRIIDDDLGNSKMFFIDP LRGVLQLQSELDYEKCTEYVIVVEATDQASSPYDRLSTQVTTRIYVVDVNDNSPNFISNS TVEIYEDSPTDYPLFYVIATDADWLENGRVTYSIKDRNVNSKFAINADTGALTLTRRLTK DDPNHYQLTVKATDHGKPPLSATQIIQIRVIPGHLNALRFERSSYRSSIIENTSPGSIVV QIKASEGDEKSTSNFTYHLLPGGNGYEKLKIDEITGIITTKESLDREEFPELVVAVIAEN INEPSRFDISTVYVEVEDVNDNRPIINKDSCHPIVIPENVHMNNLVTIYATDRDSDLNAR IVYSIVGGNDGEKFNINPQSGLVSCKALDRESRSQYNLTILATDSGVSRLADSCNLIVTV SDENDNVPKFQSDVYSIDVVEDARPGTTVLKLTADDFDEGRNGILTYSIAEGADGTFDVK PNTGEMVLLKPLNYESVKSYKLKVNVNDQGAAKQHWSTAVVNIKIIDVNDNAPVFIKQPF VATVSGKIAAGQRIVKITAKDADGPGLNSDLYYSINPVTGVISAKREITFKPGSIHFLKV IVMDKGEVPKKTVGLVKIIVEEEYGKTEELLSFEKDVYYTVIEKTIPYNSWVKQVKAIPK QFLGKSAPQVQYRIVAGNELKLFSIDQATDREIKDHYELILSATDFANPSQITTAELEIT VLDVNDNTPSFPPTKPVFVKEDIPVGSFIASVTANDVDSFPALTYHFTEKGNPGEFFKID KFSGQIMLAKRLDYEKQSIHTLEIQAYDGIHYAFVKQIIQLIDINDNAPTFSHAVHQIFL SLGSVQGSTIGRITAVDEDGGENGRITYKLLKINDLNFARLKSTPLTTPEIWIDSNTVFK LIVEASDNGKPQRSSRLPVVVQIHFSPVQEAARFALPVYSINANGIFEIDALGRLIVMKP LDREKVDKYHFVATIESHEFGVENSTTNVIIYVEDVNDNAPVFSHPEYHISVNESMPVGS VIMKLSASDEDIGVNSLLHFEITSGNTESTFAIENSTGVIKLQKKLDNTKINHYKLILKV TDSGVPARSSLAMCYVLVMREMIGLYLGHVKENSPNDTLIFTVKAVNDNQATSTSASEVF YFIKETEMEDDGKYFAINSKNGEVRAKQQFDYENRTSYKFTAAVRDSLGREHTVPCQVLI KGEDEYAPAFSEHRYVFKTTFDAVVNHGVGAVYADDKDDGLDGQVSYEIKEETKFFEIHP KTGVVTLRQSLEKLQYMNDEEELALIYPESQRYSELTSNADSKDSRMRGVEKLFLFTVVA FSGTNANRRKLNTTTIEIQISKPLPSKAVPLSSAFIVSISAGLIFLCCCAAAIICIIRIR RPNVQPSMKSVSYPKYPQKHSKLSNSKYAFFKMNRKEKEESRSNVCFTNCDVCCNSPDEK LPTIPIFIFKHDKPFQVASW NT seq 6723 nt NT seq  +upstreamnt  +downstreamnt atgcatgacattgtcgtttcagcttttgatggtggaggtttatccagttcagcagtcatt cgagttagtgtggaagacgttaacgataactatccaacgttttatccactcgtttataat gtcagcctccgtcaaagtgttctacccggcacaccggttcttgtagtatcagccacagac ttagatagcggtttgtttggagaagtgaattatataatttcttccggaaatgatggtgaa tcgtttcgaattgaacctcacagtggtgaattatacgtaaatgcaaaattatttcctact gtctatcagctgaaaatcaaagccgtggacggtggtaattttgcatctccacaaatggct actgttacagtgactgttctaacggaaaattttccaagcccatactttgaagagaaattt taccgattcactgttcgtgaagatgcattgcctggcatatccgttggacgagttgttgca catggacaaggttcaatagcatatcatatatattccggcgatccgaatggatatttttcc attgacggaaatacgggtgaaattacagtatctaaatatttagatcatgaagaacgatct gttattctcttgaatattcaagcagttttgggctatccacctagttataatcacagtcaa gttcaagtgattgttgaagatattaatgacaatgctcccctatttgatcaaagctatgct gaaattagcgtaatggaagatcacgaagttggaattgctctatatactgcaaaggcaaca gatcgtgatagtggtctaaatggtcaaattcgctatcgtctttctgttaatcctgaaaat acttttatgattcatccagtcagcggtgaaattcgtcttaaccacaatcgcgcatttgat tatgaaaagcgaaaaaactataccctagttataactgctcaagatggaggtattccttca tttacaactgaaatgacacttttgatatttgtattggacgcaaatgatcacagccctgaa tttttgcaaaagatttatcgctcagcagtgtatgaaaatgctcctttaatgacaaaaata tttcagctgaaagcaatcgacctagaccatggtacaaatagccaaatcatgttcaaaata gatccaaatcaggaaactgccttaaatcagactcttgagtactttgatgtttacgctgat tctggatggatatacgtccggaaaacattagacagagaaatgatacctgaattttcattt gttgttacagttagagataatggcgaacctaaaagatcttctacagcaacagtgttcatt aaagttttggacgtaaatgataatgctccaatttttgaatctgcggcatacgaattttca gtggaagaaaatcaacccaaaggtacatttgtagggcaagtagtggctcatgatgcggat tttggtcttaacggcacggtcagatatagattggacagtgaacaggtgaaaatttttcat gtcagcttggatggaaagttgattacatcaggtgttttggattatgaattaactgatttg tatgaacttcaaataatcgcttacgatggtggcataccatcactttctactacatgtaaa gttatagtacatgtaaaagatgttaatgacaatgctccgtttttcattttgccaacgcgt caagataatatattatttcgagaagaacaaagtagtggaacagaagtaattcaagttcaa gctagagatccagattctgggcgtaacggaacagtacgttaccgtttagatgcagaatca tctactccaccaatgccgtttcgaataaatcgtagaacaggcatcatatacagtactgaa gttctggattatgaaaaaggaccaacaatctataaagtaacagtcattgctgaagactgg ggaaagccgatactgtcatccaaaaagtgtatcacaatagaacttgtagatattgaagat ggaagttcttacgctgacgataatgaaacgtcaacgtttgaactgtcagaatcagttcca gttggaacaaacattggatctgtggattctgaacggattggttatttaaaaaattctaaa gataataattcaccgattactttagagcagttggtagatatttcttacagtatctcatct ggcaatagtatgggaatttttgacatagatccgtttacgggtgcactttttaccgtcaga agattagactatgaaatgactaacatgcactttttgacggtaaccagaactaatacttca caaacgacatttccaagaattaaagaatttccgatcaaaattcatgttctggatgaaaat gacaatcgtccggttttctctgatgatccggtaattttctcattgcctgaaaatacacct gttggaactgatatttggatgtataatgctactgatgccgatactggaaagtttggtaga ctgaaatatcgaattattgatgatgatttaggcaacagtaaaatgtttttcattgaccct ttgcgcggggtattacaactgcaatctgaattagattatgaaaaatgtacagaatatgta attgttgtggaagcaaccgaccaagcatcttcaccatatgatcgccttagcacacaagtt acaacaagaatttatgttgtagatgtcaacgataattccccaaattttattagtaacagt acagtagaaatatatgaagattcacccactgattatccgctcttttatgtcattgccact gacgctgattggcttgaaaatggtcgagttacttattcaattaaagatagaaatgttaat agcaaatttgctataaatgctgatacaggtgctttaacattgacaagacgtttgacaaaa gatgatcctaatcactatcaactgactgtcaaagcaacagatcatggaaaacctcctctc tcagcaacacagattattcaaattcgtgtaattccagggcatttaaatgctctacgattt gagagatcatcatatagatcatcaataattgaaaatacttcaccgggtagtatagtggtg caaataaaagcttcagaaggagatgaaaaatccacttcaaactttacttatcacttactg ccaggcggaaacggctatgaaaaattgaagatagatgaaattactggcataataacaaca aaagaatcactggacagagaagaatttcctgagttggttgtagcagtcattgctgaaaac ataaatgaaccaagtcggtttgatatttctactgtgtacgttgaagtggaagacgtaaat gacaaccgcccaattattaataaagacagctgccatcctatagtgattccagaaaatgtc cacatgaataacttagtgactatttatgccactgatagagattcagatttgaacgcaaga attgtttacagcatcgttggaggaaatgatggtgaaaagtttaatatcaatccacaaagt ggattagtatcctgcaaagcgttggacagagaaagcagaagccaatacaacttaacaatt ttggccactgattctggtgtttccagattagctgattcttgcaatttaatagtgactgtt tctgatgaaaatgacaatgtgccaaaattccaaagcgatgtatactcgattgatgtagtt gaagatgctcgtccaggaaccacggtactgaagctaaccgccgatgatttcgatgaagga cgcaatggaattttgacatacagcatcgctgaaggtgctgatggaacttttgacgtgaaa ccaaatactggcgaaatggtgctattgaaacctttgaattatgaatccgtaaaaagttat aaattgaaagtaaacgtcaacgatcaaggtgcagcaaaacaacactggagtacagcagtg gtgaacattaaaattattgatgtcaatgacaatgccccagtatttattaagcagccgttc gtggcaacagtatcagggaaaatagctgcaggacagcgcattgttaaaattacagcaaaa gatgctgatgggcctggtttaaattctgatttatattacagcattaatcctgtcactggt gttataagcgcaaagcgtgaaattactttcaaacccggtagcattcattttttaaaagta atcgttatggacaaaggagaagtgcctaagaaaacagttggcttagtaaaaattattgtt gaagaagaatatggaaaaactgaggagctactttcttttgagaaagatgtttattatacc gtgattgaaaaaacaattccatacaatagctgggtcaagcaagtaaaagctataccaaaa cagttccttggaaaaagcgcacctcaagtgcagtatagaattgttgctgggaatgagcta aaacttttttcaattgaccaagctactgatcgtgaaatcaaagatcattatgaacttata ctttcggcaacagattttgcaaatccatctcagatcactacagcagaacttgaaattact gtccttgatgtcaacgacaatactccatcatttcctccaacaaagcctgtttttgtaaaa gaggatattccagtcggcagtttcattgcttctgtgactgcaaatgatgtcgattcgttc cctgcattaacctaccattttacagaaaaaggcaatccaggagaattctttaaaatagat aaattttctggtcagataatgcttgccaagcgattggattatgaaaaacaaagtatccat actttggaaattcaggcatatgatggcatccactatgcatttgtaaagcaaataatacaa ctaattgacatcaatgacaatgcacccactttttcacatgcagtgcatcaaatatttctt tctttgggatctgttcaaggctctacaattggtcgtattacagcagtagatgaagatgga ggagaaaatggacggataacttataaacttttgaaaataaatgatctaaactttgcaaga ctaaagtcaacgccattgacaaccccagaaatatggatcgattctaatacagtttttaaa ttaatcgtcgaagcttctgataatggcaagccacaacgatcaagtcgtctaccagtagtg gttcaaattcatttttcacctgttcaagaagcagcaaggttcgctctgccggtgtacagc ataaatgcaaacggaatatttgaaattgacgcacttggtagacttattgtaatgaaacca cttgatcgagaaaaagttgacaaatatcattttgtggcaacaatagagtcacatgaattt ggtgtagaaaattcaactacaaatgtaatcatttacgttgaagatgtgaacgacaatgca cctgtattcagtcatcctgaataccacatcagtgtcaatgagtcaatgccagttggaagt gtgattatgaaattatctgccagtgatgaggatattggtgtgaactctttgttgcatttt gaaatcacctctggaaacactgagtcgacttttgcaattgaaaacagtacgggtgtaata aagttgcagaagaaattagacaataccaaaatcaatcattacaaattgattttgaaagtg actgattcaggtgtacctgctcgttcatctttggccatgtgctacgttttggtcatgaga gaaatgattgggttataccttggacatgttaaagaaaattcaccaaatgacactttgatt tttactgtaaaagctgtgaatgataatcaggctacatcaacatctgcgtcagaagtattt tactttataaaagaaactgaaatggaagatgatggaaaatattttgcaattaattcaaag aatggtgaagttcgtgctaaacaacagtttgattatgaaaatagaacatcctacaaattt actgcagccgtgagagattctctcggaagagaacataccgtaccatgtcaagttctaatc aaaggagaagatgaatatgcgcctgctttcagtgaacatcgttatgttttcaaaacaact ttcgacgccgtagtcaatcatggagttggagcagtgtatgcagatgataaagatgacgga ttggacggccaagtttcttatgaaatcaaagaggaaacaaagtttttcgaaattcatcct aaaactggagtagtgactcttcgtcagagtttagagaaattacaatatatgaacgacgaa gaagagctggcactgatctatccagagtcacaacgttattctgaacttacttcaaatgca gattccaaagattcacggatgcgtggagtggagaaacttttcctatttactgttgttgcg ttttcaggaacaaatgccaacagaagaaaattgaacactactaccatagaaattcaaatt tccaaaccccttccatcaaaagccgttccactgagctcggcttttattgtctcaatttct gccggtttgatattcctttgctgttgtgctgctgcaattatttgtataattcgtattcga cggccgaacgtgcaaccgtcgatgaaatcagtcagctatccaaaatatccacagaagcat tcgaaattatcaaatagcaaatatgcttttttcaaaatgaacagaaaagaaaaagaagaa tccagatcaaatgtctgctttactaactgcgacgtgtgctgcaattcacctgatgaaaaa ttaccaacaattcctattttcatttttaagcatgataaaccttttcaagttgccagttgg taa

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