KEGG T01609: Tsp

Trichinella spiralis: Tsp_05143

Entry

Tsp_05143 CDS T01609

Definition

splicing factor 3B subunit 3

Orthology

K12830

splicing factor 3B subunit 3

Organism

tsp Trichinella spiralis

Pathway

tsp03040

Spliceosome

Class

Genetic Information Processing; Transcription; Spliceosome [PATH:tsp03040]

SSDB

Motif

Pfam:

CPSF_A MMS1_N

Other DBs

NCBI-GI:

339259094

NCBI-GeneID:

10908640

UniProt:

E5SX55

Position

Unknown

AA seq 1241 aa
MNIPNKLPTPTNSFFVQLSFESIGHNNSRKLTSSNNSTHIALLFHAYLKTKTTFNMHLYN
ITLQKPTSIYNAISGNFSGVKLQEICVSRGHLLELLKPDPMTGKLSVIISHECFGIIRSL
SSFRLTGSSKDYIVVGSDSGRIVILEYIPDKNIFTKVHQETFGKSGCRRIVPGQYLTVDP
KGRAIMIGATEKQKLVYIMNRDSAARLTISSPLEAHKSQSICFQIVGVDVGFENPLFACL
EVDYEEIDSVNTEVGKAIQTLTFYELDLGLNHVVRKYAEPLDYFANHLIAVPGGSEGPSG
VILCCENYIIYKNLGEQLDVRCPIPRRRNDLEDPDRGILVNAFFFLLQTEQGDIFKVTLE
VFDDIVTEIKIKYFDTLPVANSICMLKSGFLNLYQIAKLGDNDDETEFSSLMPLDEGDTF
FFAPRGLQNLIQVDELLSLSPIMSFEVADIVYEDTPQLYAACGRGPRSSIKVLRHGLEVT
EMAISELPGNPNAVWTVKKHQDAEYDAYIVVSFVNATLVLSIGETVEEVTDSVVLGVVDV
QIYPEGIRHIRCDRRVNEWKVPGRRVITNCAVNCRQVLIALNGGEIVYFELDEGGQLNEY
TERKEMPCDVVAMALADIPPGEIRCRFLAVALTDRTVRVISLDPSDCLTPLNMQSLPAMA
QSLCIAAVGGDTMESTLFLNIGLEVNKFTNGVLLRTVLDSVTGELQDTRTRYLGMKPVKL
FKVKMHDNIAVMNSVQLNIIAMSSRAWLLYKYQTRYHLTPLSYIPLEYASNFASDQCPEG
VVAIAGNSLRILAIENLGTIFNYSSFQLSHTPRRFVFHPETGNIITVETDHNSLTTQTKM
KRREILAKEMIELAGEDEKEIAAEMSQAFLEEDLPEVQFGTPRAGNGTWASVINVLSASD
GHNLFKVELEQNEAAFWYETKNALMALVQFACHPEAPLLLVGGAVNYNLRPRKVESGFIY
TYTISALGDRLEMMHRTTVDEAVTALASFRGRLLASAGKMLRIYDLGKKKLLRKCENKHM
PNLITHILTMGHRIFVGDVQESVFFYRYKPIENQLVVFADDTHQRFCSAMCILDYDTVAL
RLPSDCTDDVQEDPTGIRALWDKGILNGASQKCEMVATFYVGECVTCLQKAMLIPGSSES
LVYSTMSGMIGALVPFSSKEDYEFFQHLEMHLRTEYPPLCGRDHLAYRSFYAPVKGVIDG
DLCEQYCLLEYGKQKEISNELDRVPSEIMKKLEDIRNRYAF

NT seq 3726 nt +upstreamnt +downstreamnt
atgaatataccaaataaattgccaacacctaccaattctttcttcgtacaattgagtttc
gaatcaatagggcataacaactcgagaaaattgacatcttcaaacaactctacgcatatt
gcacttttatttcatgcatacttgaaaactaaaactacatttaacatgcatttgtacaac
attacattgcaaaaaccaacttcaatttataatgctatcagtggaaatttttctggcgtg
aagttacaagaaatttgcgtttctcggggccatcttttagaacttcttaagccggatcct
atgacaggaaagttgagcgttataatcagtcacgaatgctttggaatcattcggtcttta
tcaagtttccgtttgacaggctcaagcaaagattatattgtggtcggatcggactctggg
cgtatagttattttggaatatattcccgataagaatatttttacaaaagtacatcaagaa
acatttggaaaaagtggctgtagaagaattgttcccggtcaatatttgactgtcgatcca
aaaggaagagcaattatgatcggtgcaacggaaaagcagaaacttgtctacatcatgaat
agagattcggctgccaggttgacaatcagctccccattggaagctcacaaaagtcaaagt
atttgtttccagattgtgggtgttgacgtcggctttgaaaatccactgtttgcttgtctg
gaagtggactacgaagaaatagattctgtgaatactgaagttgggaaggccattcaaact
ttaacattttacgaactcgatcttggattgaatcatgtagtcagaaaatatgcagagcca
cttgattattttgccaatcatttaatcgcagttcctggcggctctgaaggtccaagtgga
gtgatattgtgctgtgaaaattacattatttataaaaatcttggcgaacaattggatgtt
cgttgtcctattccacgcagaagaaacgacttggaagacccagatagaggaatattagtg
aatgcatttttctttcttttgcaaactgaacaaggtgacattttcaaggtcactttggaa
gtgtttgatgatattgttacggaaattaaaataaaatatttcgatactctaccagtggca
aattcaatatgcatgctgaagtcaggatttctcaatttatatcaaattgcaaaattgggt
gacaatgatgatgagactgaattttcatcgttgatgcctttggatgaaggggatacgttt
ttcttcgctccaagaggattgcaaaatttgattcaagtcgatgaacttctttcgctgtcg
ccgatcatgagtttcgaggtagcggacatcgtttacgaagatacaccccaattgtatgcg
gcttgtggtcgagggccaagatcgtcgatcaaagttctcagacacggtttggaggtcact
gaaatggcgatatcagaattgccgggaaatccaaatgcagtttggacagtaaagaaacat
caagatgccgaatatgatgcatacattgtcgtttcgtttgtcaacgctactctcgtatta
tccattggagaaacggttgaagaagtgaccgattcggttgttttgggggttgttgatgtt
cagatttatccagaaggaattcgccatattcgttgcgatcgtagagtgaacgaatggaaa
gtaccaggccgaagagtgatcaccaattgtgcggtcaactgtaggcaggtgttgatcgcc
ctcaacgggggtgaaattgtctatttcgaattggatgagggtggtcagttgaatgaatat
actgaacgaaaagaaatgccctgcgatgtagtggcgatggctttggcggatattcctcct
ggagagataagatgtcgatttttggcagtagctttgaccgatcgaacggtgcgtgtaatt
tccctggatccatccgactgtttgactccactgaacatgcaatctttaccagcaatggca
cagtcgttgtgcattgcggcggtcggtggcgataccatggagtcgacactatttcttaac
attggattagaagtgaacaaatttactaatggagtgttgttgcgcactgtgctcgattca
gtcactggagaattgcaagacactcgtacacgatatcttggaatgaaaccggtgaaattg
ttcaaagtgaaaatgcacgacaacattgctgtaatgaattcagtgcaattgaacattatt
gccatgtctagtcgtgcatggctgttgtacaagtatcaaactcgataccacctcacgccg
ctcagctacatacctctggaatatgcgtccaattttgcctctgatcagtgtcccgaaggg
gtggtcgctattgctggcaacagtttacgaattttggctattgaaaatcttggcacaata
ttcaattattcttcatttcaattatcgcacacgccgaggcgttttgttttccacccagaa
actggcaatataataacagtcgaaaccgatcacaattcattaaccacgcagacgaagatg
aagcgacgagaaattttagccaaagaaatgatcgaattagctggcgaagatgagaaagaa
attgcggctgaaatgtcccaagcatttttggaagaagatttacccgaggttcagtttggc
actcctcgtgctggaaacggtacctgggcatcggttattaatgttttgagtgcatctgat
gggcataatttgttcaaagttgagctcgaacaaaacgaagcagcattttggtacgaaacg
aaaaatgcgctcatggctttggtgcagtttgcttgtcacccagaagcgccgttgttgctt
gtcggaggggcagtgaattacaatcttaggccaagaaaagtggaaagtggattcatttat
acgtacacgatttctgctctgggcgatcgattggaaatgatgcaccgaacaactgttgac
gaagcggttactgcattggccagctttcgtggtcgactgcttgcatcggctggaaaaatg
cttcgaatttatgatttgggaaaaaagaaacttttacgaaaatgtgaaaataagcacatg
ccaaatttgataacgcacattttaaccatgggtcatcggatatttgttggagatgtgcaa
gaatctgtatttttttatcgctacaagccaatagagaatcaactggtcgtctttgccgat
gacacgcatcaacgattttgcagcgcaatgtgcatactcgattacgacactgtagcgttg
cgacttccgtccgattgcactgatgatgttcaagaagatccgacgggaattcgtgcattg
tgggataaaggcattttgaatggtgcttctcaaaagtgtgagatggttgctacgttttac
gttggcgaatgtgtcacttgtttgcaaaaggcaatgttgatacctggaagctcagaatca
ttggtctattcaacaatgtcaggaatgattggcgctttggtgccattttcatctaaagag
gattatgaattttttcaacatttggaaatgcatttgcgtactgaatatcctcctttgtgc
ggacgtgatcaccttgcttatcgatctttttatgctccagtcaaaggtgtcattgatgga
gatttatgcgaacaatactgcctgttggaatatggcaagcaaaaagaaatttccaacgaa
ttggatcgggttccatctgagataatgaaaaaattggaggatattcgcaatcgttatgcg
ttttga

All links

Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (2)   
   Pfam (2)   
All databases (11)   

Download RDF

DBGET integrated database retrieval system