Trichinella spiralis: Tsp_05839
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Entry
Tsp_05839 CDS
T01609
Name
(RefSeq) hypothetical protein
Organism
tsp
Trichinella spiralis
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EF-hand_13
P2R3B_EF-hand
EF-hand_7
EF-hand_1
EOS1
EF-hand_6
EF-hand_5
Fe_bilin_red
EF-hand_8
Motif
Other DBs
NCBI-GeneID:
10910747
NCBI-ProteinID:
XP_003380131
LinkDB
All DBs
Position
Unknown
AA seq
1043 aa
AA seq
DB search
FSEISIRRLMYKMSPANKSKQKATAAQDDMLKKDDIGNELRLHEVYCQEKEIDNLKQQQS
AEEEEEEENELCLPAHRLAVSYFQPALCTSPKRRNDHDSRFNVSQLAANRGAMARQPLGQ
RIYWMSATDQRGGWGSPSLLRSAITNRSHHLWEPVAVQHQLVTTVHRQWFSTVDLRPVAQ
RAHLAPVQPDLSALDDVLKDVGTMPRRRSDTWRSNFLAKRNQFARELDDNVQSRSFTKSN
HYHQHQYSNHQKQQEQQHHHHHHYQQQQQQQQQQQQQWYRYPESQQTISTKTITNACYCP
IGVCSFFFQPKCKLTNGSRYYWPKATTVDRSFSDRDVYDYVVQRCASPVLDGDRFSTTVE
NGGERGRRCEIQKSSSLTSTGLWTDFNGVEDVSRPSTELSRDRSRQPTWEAWNTVVKAII
DECDEKPRATPTRSIRPFSGPTPTMVNSTATAERPEPDFTELDSILNNLGVPPTKHGNRP
HGAGQTAAGKSSAATDEAIFGSRPAKSVATRPTNWMINGSVAERILQFEKRPTIPHDRSN
MPHVQQQYTATTDNKNLNSSNININKLRVWDATLPTAVFHNSTVNNFSSAKWLTDSLKST
ANSLPVVHLTLPQPSLPPVLLASSQNEHIPRCGVHIFYFPCGKPSDPNVISVQLRKCAEI
FVRHSGKADLHAMGEVAEACGLPYYVRQPFYHCCRSAPDDGFVNYYNFKEFWKRICKVGS
DPVYAFIRLLNGDSANHVIATNFLPMIQDIIDHHPGLSCLREAPTFHSCYAQTVISRIFF
SVSLSWSEKITATELRRANFLSTLWRLREEEDINKVTDYFSYEHFYVIYCMFWKLDDDHD
MLIDKTDLERYSDYALNRRIIDRIFSTAVNCNMTSNVQQMTYVEFVWFLIAEVDKQHPKR
YAMYCNQAKGSIEYWFRCMDLDGDGYLSMYELHYFYEEQVERMTEYGLAAVPFTDLICQI
FDAVKPAHPDKISLSDLKRCRMSAFFFDTFFNVRKFLTHEDPDSSRHLYDEFEDAANEWD
RFAAIQYKNLLDVELQQEEETEM
NT seq
3134 nt
NT seq
+upstream
nt +downstream
nt
atttttccgaaatttccattcgacgtttgatgtacaaaatgtcaccggccaataaatcga
aacagaaagcaacagccgcacaagatgacatgttgaagaaggacgatataggcaatgaat
tgaggttgcatgaagtttattgtcaggaaaaagaaattgataatttaaagcaacagcaga
gtgcagaagaagaagaagaagaagaaaacgaattatgtttaccagcacatcgtttggctg
ttagttattttcaacctgcgctttgcacgtcacccaagcgccgcaacgatcacgacagcc
gcttcaacgttagccagttggcagctaatagaggagcaatggcacggcagccgttgggtc
aacgtatatattggatgtcggcgacggaccagcgcggtggctgggggtcgccgtctctgc
ttaggtctgccattactaatcgaagccatcatttgtgggaacctgtagctgtgcagcatc
agcttgtcacaactgtccatcgccagtggttcagtacggttgatttgagaccagttgctc
aacgggctcacttggcaccagtacagccggacttgtcggccctggacgacgtactgaagg
atgtaggtacaatgccacgtcgtcgaagcgacacctggaggtcgaattttttggctaaac
gtaatcagtttgctcgtgaactggatgataatgttcaatcaagaagctttaccaaatcaa
atcattatcatcaacaccaatacagtaatcaccagaagcagcaagagcagcagcaccacc
accaccatcactaccagcaacagcagcagcaacaacaacaacaacaacaacagtggtatc
gatatcctgaatcacagcagacaatttctacaaaaacgatcactaatgcttgctattgcc
caataggcgtctgcagttttttctttcaacccaaatgcaaactaacgaatggttcacgct
attactggccaaaagcgacaacagtggatcgttcattcagcgatcgcgacgtatatgatt
acgtggtgcagaggtgcgcgtctccggtgttggatggtgatcgattcagtacgacagtgg
aaaatggtggtgaacgcggtcgaaggtgtgaaattcaaaaatcgtccagcttgaccagca
ctggcctgtggacggatttcaacggcgtcgaggatgtgtcgagaccgtcgacggagctga
gccgcgatcgaagccggcagccgacttgggaagcttggaacacggtagtcaaggcgatca
tcgacgaatgcgacgagaagccgcgtgccacgcccacacgttccattcgaccgttctctg
gaccgacgccgacaatggtgaacagcaccgccactgccgaacgacccgagccggacttta
ccgagctggattccattttgaacaatctcggcgttcctccaaccaagcatggaaatagac
cccacggagccggacagaccgcagcgggaaaatcaagcgccgcaacggacgaagcgattt
ttggttctcgaccggctaaatcagttgccacacgtccgaccaactggatgatcaacggct
cagtagctgaacggatattgcaatttgaaaagcgaccaacaataccacacgaccgatcta
atatgcctcatgtacagcaacagtatacggcaacgactgacaacaagaacttgaacagca
gcaacatcaatattaataaattacgggtttgggatgcgacactgccgacggccgtttttc
acaattctaccgtaaataatttctcttctgccaaatggctaaccgatagcttgaaaagca
ccgccaattccttgcccgttgttcatttgacgctcccacaaccctctttaccgccggtgc
tgttggcttcatctcaaaacgaacatatcccaaggtgtggtgtacatatattttatttcc
catgcggtaaaccctcggatccgaatgtaattagtgtacagttgagaaaatgtgccgaaa
tttttgtccgacattcaggaaaagctgatttgcatgcaatgggcgaagtagccgaagcgt
gcggtttgccttattacgtccggcagccgttttaccactgttgccgttctgcaccggatg
atggatttgtcaattattacaatttcaaagaattttggaaacgaatatgcaaagttggaa
gtgatccggtgtatgcattcattcgcttattgaacggcgattcagcaaatcacgtcatag
ctacaaactttttaccaatgattcaagatatcatagatcatcatcctggactttcttgtc
ttcgcgaagcgccgacatttcattcatgctatgcacaaacagtaatatcgaggatatttt
tttctgtcagcctcagctggtctgagaaaattacagctactgaattgagacgagcaaatt
tcctttctacactttggcgtctgagagaagaagaagatataaacaaagtgacggattatt
tttcctatgaacacttctacgtcatttattgtatgttttggaaattggacgatgatcacg
acatgctcattgataaaacggatctagagcgatattcagattatgctttaaacagaagaa
tcattgatcgaatattttctactgccgtgaattgcaatatgacaagcaacgttcaacaaa
tgacttacgtggaatttgtgtggtttttaattgcagaagtggacaaacaacatccgaaga
ggtatgcgatgtattgtaaccaagcgaagggaagtatcgaatattggtttcgttgcatgg
atttagacggcgatggttatttgtccatgtacgagttgcattatttctacgaagaacagg
tggagaggatgactgaatacggtctggcggcggttcctttcactgatctcatctgtcaga
ttttcgacgccgtcaagccggctcatccagataaaatatcgttgagtgatctgaaacgat
gccgtatgtcagcgttctttttcgatacattcttcaacgttagaaagtttctcacgcacg
aagatcctgattctagccgccatctatatgatgagtttgaagacgcagccaacgaatggg
atcgattcgcagcaattcagtacaaaaatttgctggacgttgaacttcaacaagaagaag
agacggaaatgtag
DBGET
integrated database retrieval system
