Trichinella spiralis: Tsp_06180
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Entry
Tsp_06180 CDS
T01609
Name
(RefSeq) piggyBac transposable element-derived protein 1
Organism
tsp
Trichinella spiralis
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DDE_Tnp_1_7
RNA_pol_Rpc4
Motif
Other DBs
NCBI-GeneID:
10911665
NCBI-ProteinID:
XP_003380480
UniProt:
E5S5M2
LinkDB
All DBs
Position
Unknown
AA seq
563 aa
AA seq
DB search
MSENFKSVSDAVVFCEKWPRDLQLQAVVVPPSVETQELTDNEDADDNILTTFPKPRCYVS
GRVEIHHKISDVDAYEGKSSEMGKKLKYQQMETDRAVIWKAVNAGYLHDAEKEVKTPDMT
MLRDCLQNWSPRDVFEKFFDEEIITHIVTETNRYGLDTLGDNFSVDEEEMKTFLALLLFS
GHYDLPEEDMYWQFTDDVYVPLVYNAMSKRRFRQLKRCLHLANNEELDKHDRFAKLRPFL
NLLKKKYLQFGVWPNDLAVGELLVTCPGLNPDKLGMQNTDVEFGYKTFVLVNSSGYIFNF
ALYDGATEQEDCPVEDNDLGCAGGAVAELLKPVEFFSGKCIFFDDYFTSHPLLCYLKTIG
VKATGLLSILRSRKLPLLPIEEFAHLRRGQFCQLLDPINGVVAVRYKYDRVYTFMSTEFG
FDPLIETEKDGKVFSLPNVFHEYSRKRYKVNYITESAKKFKVQLRNRKWWWPVFTHFLDL
TVYNAWRFYHEASQAPMTLFNFRSELTKSWLASADIVSAEDEDEEDEEQEEAEGEEAEGE
EEAEEDEEEEDEDEEEEEEEGGE
NT seq
1692 nt
NT seq
+upstream
nt +downstream
nt
atgtcagaaaattttaaatcagtttcggatgccgttgttttttgcgaaaaatggcctcgt
gatttacaattgcaagctgtggtcgttcctccttctgtagaaacgcaagagttgactgat
aatgaagatgcggacgataatatactgacgacttttccaaagccgaggtgttatgtttct
ggtcgtgttgaaatccatcacaaaataagtgacgttgatgcgtatgagggaaaatcatcg
gaaatgggtaaaaaattgaaatatcagcaaatggagactgacagagcggtgatttggaaa
gcagtgaatgcaggttacctccatgatgctgaaaaagaagtaaaaacacctgacatgaca
atgctgcgcgattgtttacaaaattggtctccacgtgatgtttttgaaaaattttttgat
gaggaaattatcacgcacattgtaactgaaaccaatcgatacggcctggacactcttgga
gataatttcagtgttgacgaagaggagatgaagacatttttggccttgctgcttttctct
ggtcattatgatttgcccgaagaagacatgtattggcaattcactgacgacgtatacgtg
cctcttgtttacaatgccatgtcgaaacgcagatttcgtcagttgaaacgctgcttacat
ttggctaacaatgaagaactcgataaacatgacagatttgcgaaattgagaccatttttg
aatttgttgaagaaaaaataccttcaatttggtgtatggccaaatgatctcgctgtgggt
gaactgttggtcacttgtcctggcttaaatccagataaacttggaatgcaaaatacggac
gtggaattcggttataaaacatttgtacttgttaattcttctgggtatattttcaatttt
gccctctacgatggtgccacagaacaggaagactgtcccgtcgaggacaatgatctcggt
tgtgccgggggtgcggttgcggaattgctcaagcctgtcgaatttttcagtgggaaatgt
atattttttgacgattattttacatcgcatccacttctttgctatttgaaaacgattgga
gtcaaagcgactggccttttaagcattttacgatctcgtaaacttccacttttgcccatt
gaagaatttgcccacttacgtcggggacaattttgccaactgttagatccaatcaacggt
gttgttgcggtccggtacaaatacgatcgggtttatacgttcatgtcgacagaatttgga
tttgatccattgattgaaacagaaaaagatggcaaagtgttttcactgccaaatgtattt
cacgaatacagtcgtaaaaggtataaagtgaattacatcaccgaatcggcgaaaaaattt
aaagtgcaacttcgtaatcgaaaatggtggtggccagtgttcactcattttctggatttg
accgtctacaatgcatggcgattctatcatgaagcttcgcaagctccgatgacgttgttc
aattttcgctctgagttgacaaaatcttggcttgcaagcgctgatatagtatctgctgaa
gatgaggatgaagaagatgaagaacaagaagaagcagaaggagaagaagcagaaggggaa
gaagaagcagaagaagatgaagaagaagaagacgaagacgaagaagaagaagaagaagaa
ggtggtgaatga
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