Trichinella spiralis: Tsp_06213
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Entry
Tsp_06213 CDS
T01609
Name
(RefSeq) hypothetical protein
Organism
tsp
Trichinella spiralis
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rootletin
ERM_helical
PI3K_P85_iSH2
Motif
Other DBs
NCBI-GeneID:
10908298
NCBI-ProteinID:
XP_003378299
LinkDB
All DBs
Position
Unknown
AA seq
945 aa
AA seq
DB search
MSSLNDQLTADLLRVSLQWKKSEKELRNRDQQLLDLEQTFIRHLNESHVNYVNLWQQYQA
IQRDYRRLRSEVFRDMKMMQYDIYRMIVKSKTVIGEQVQNRLMRQLVQRICEIKPEQQHP
VNEDGSANEEQQHIVVDSGTDKEEKKNTVVVTSGDINRLKSIEEQNDSLMELLKKSYSTL
NSVLIVLMDMGIEAESDDQSEVTWTWDAMEQCSRLTLENGELKASVDLLKEQAAQEHRES
EALRSRMQTVHGELDTLKMEHQFSQQQLELAESQLNSLLENKLPQVDAANFVHNEVVDRL
DAENENLRREKRSLTKRIVQLEIELKLAKNCQAELINAAEQREQASSLIEADKTILDEEV
AVLIDWDIFFPQANDSVVEWQQKYQDCLKELKQRISVMATLRDENENLEIVNSDLQRLQA
ELKSKLNMISVEKSRGEVQKNQYQSNVLQLETQLREAQDNHQLISQQLLDCQQDNFNLER
RISIADELVKQQDEALKLLINQKHQLENKNNKLEKMLSSQSKECKKLQETLDFVCDQCDL
HFNQSDKLKEGVKLLVEEKGRLISEYLGKAASCSEMATNSNLLLVEKDQLTKKVAELNDE
IRSLHSQNGHLEEALNIQKSKLGSVELKLNKCRGENLELSKTIANQETTIRSLDNRLADV
HNDLALAEMEKQDIRAENRKLKHQLDLIDKSLEMTKACSRDVEKQRVDLEKQMVNKQGEL
ANLSGMLKISQDTEQELKRQLETMSSKRQQLMDKLNDYEIEMLALRTKLKKEELNSKLLR
EELAENNDKIAQLMDAVDKITNDRVELDKKVTTFEKENLLHVQNVETMKCKLRKMDQQFA
ERLVELSRSHQDKVGMLENRHAKDLQQITALEKRIHQLEKELDRERSKREMSIMRSMESL
FEMPNRMTTANSTNAIFRTSSPLNAAVPFEIADVEPDHAPTPSKK
NT seq
2838 nt
NT seq
+upstream
nt +downstream
nt
atgagcagtttgaatgatcagctgacggcagatttgcttcgggtttcgttgcagtggaaa
aagagtgaaaaagaattgcgcaatcgagatcaacagctgcttgatcttgaacaaacattt
attcgtcatttgaatgaaagccatgtgaattatgtgaatttatggcaacaatatcaggca
attcagcgggattacagacgattacggtcggaagtatttcgtgatatgaaaatgatgcag
tatgatatttatcggatgattgtaaaatcgaaaactgtcattggggaacaagtgcaaaac
cgacttatgcggcaattggtacagcgaatttgtgaaattaaacctgaacagcaacatccg
gtgaatgaagatggatctgcaaacgaggaacagcagcacattgttgttgacagtggaacg
gacaaagaggagaaaaagaatacagtggtagtgacaagtggtgatataaatcgtttaaaa
tcgatcgaagagcaaaatgattcgttgatggaattgttgaaaaaatcctattcgactttg
aattctgtgttgattgtactgatggatatgggaattgaagccgaatcggacgatcaaagt
gaagtgacttggacgtgggatgcgatggaacagtgttcacgtttgactttggaaaatggt
gaattgaaagcgtcagtggatctgttgaaggagcaggcggcccaagaacaccgcgaaagt
gaagctctgcgttcacgtatgcagacggtccacggtgagttggatacgttgaagatggag
catcaattttctcaacagcagctcgaattggccgaaagtcaactgaattcgttgcttgaa
aataagctgccccaagtggatgctgcgaattttgtccacaacgaagttgtcgatcgtctg
gatgctgagaatgaaaatctgaggcgtgaaaagcgttcacttaccaaacggatcgttcag
ctcgaaatcgagttgaaattggccaaaaattgccaagcggaattgatcaacgctgctgaa
cagcgtgaacaggcgtcttcgttgatcgaagccgacaaaacgattctagacgaagaagtt
gcagttttgattgattgggatattttttttccccaggcgaacgatagtgtcgtcgaatgg
cagcaaaaataccaagattgtttgaaagaattgaagcagcgcataagtgttatggcgaca
ttgcgtgatgaaaatgaaaatcttgaaattgttaacagcgatttgcaacgtttgcaagca
gaattgaaatcgaaattgaatatgatcagcgtggaaaagtcgcgaggtgaagtccaaaaa
aaccaataccagtcgaacgttctgcaattggaaactcaactccgtgaagcccaagacaat
caccagctaatatctcaacaattgctcgactgtcagcaagacaatttcaatttggaacgt
cggatttctatcgctgacgagctggtcaaacagcaggatgaagctttgaaacttttgatc
aatcaaaagcatcaactcgaaaataagaataacaaattggaaaaaatgttatcttcgcaa
agcaaagaatgcaaaaaattgcaagaaacgttggatttcgtctgcgatcagtgcgatttg
catttcaatcagtcggacaaactgaaagaaggtgtaaaattattggtcgaagaaaagggt
cgtctgattagtgaatatctgggcaaagcggcttcgtgttccgaaatggcgaccaattcc
aatttgttgcttgtggaaaaagaccaactgacgaaaaaagtggccgaattgaacgacgaa
attcgttcactccactcgcagaatggtcatttggaagaggcgctgaatatccagaaatcg
aaactcggatcggtcgaattgaaattgaacaaatgtcgtggagaaaatttggaactttcg
aaaaccattgccaaccaagagacgacaatacgttcattggacaaccgactggccgatgtc
cacaacgatctggcattggctgaaatggaaaagcaagatatacgtgcggaaaatcgaaag
ctcaaacatcagttggatttgatcgacaagtcgctcgaaatgaccaaagcgtgttcgcgt
gatgttgaaaagcaacgtgttgatttggaaaagcaaatggtcaacaagcagggagaattg
gccaatttgtccggcatgttgaaaatcagtcaagatacggaacaagaattgaaaagacaa
ttggaaacgatgtcttccaagcgacaacaattgatggataaattgaacgattacgaaatt
gagatgctcgctttgagaacgaaattgaaaaaagaagaactgaacagtaaactgctacgt
gaagaattggccgaaaacaacgacaaaatcgctcaactgatggacgctgtggacaaaatt
acaaacgatcgtgtcgaattggacaaaaaagtgaccacgttcgaaaaggaaaatctactc
cacgtacaaaatgtcgaaacgatgaaatgcaaacttcgaaaaatggatcaacaatttgcc
gaacggttggtcgaattgtcccgttctcaccaggacaaagtaggaatgttggaaaatcgt
catgcgaaagatttgcaacagataaccgcgttggaaaagcggatccatcagttggaaaaa
gagttggaccgtgaacggagcaaacgagaaatgtcgatcatgcgatccatggaaagtcta
tttgaaatgcccaatcgcatgacgacggccaattccaccaacgccatctttcgcacttcg
tcaccactcaacgctgccgtaccatttgaaattgccgacgtcgaaccggatcatgcacca
acaccgagtaaaaaatga
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