KEGG   Trichinella spiralis: Tsp_08797
Entry
Tsp_08797         CDS       T01609                                 
Name
(RefSeq) putative multi drug resistance-associated protein
  KO
K05665  ATP-binding cassette, subfamily C (CFTR/MRP), member 1 [EC:7.6.2.3]
Organism
tsp  Trichinella spiralis
Pathway
tsp02010  ABC transporters
Brite
KEGG Orthology (KO) [BR:tsp00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   02010 ABC transporters
    Tsp_08797
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02000 Transporters [BR:tsp02000]
    Tsp_08797
Enzymes [BR:tsp01000]
 7. Translocases
  7.6  Catalysing the translocation of other compounds
   7.6.2  Linked to the hydrolysis of a nucleoside triphosphate
    7.6.2.3  ABC-type glutathione-S-conjugate transporter
     Tsp_08797
Transporters [BR:tsp02000]
 ABC transporters, eukaryotic type
  ABCC (CFTR/MRP) subfamily
   ABCC1, 2, 3, 4, 5, 6, 10, 11, 12, 13 subgroups
    Tsp_08797
SSDB
Motif
Pfam: ABC_membrane ABC_tran SMC_N AAA_16 MMR_HSR1 AAA_29 RsgA_GTPase Zeta_toxin Dynamin_N AAA_23 nSTAND1 ABC_ATPase IpaC_SipC
Other DBs
NCBI-GeneID: 10897814
NCBI-ProteinID: XP_003374070
LinkDB
Position
Unknown
AA seq 1430 aa
MQKIFLAIISISEVINQIKTIAVRRNSLKSAPAMSVKWNNATFHSIYGIERFCGEPLWIT
ACGLVIATAVCWISMLILKKSSQRDIYDADFVGPLLLCISMIDLLILQIACRQRGFVTSG
VVFLSLTAFVICGSIEFSYWVNHSKSVTFAFCFFFHLIQYFQFIKLKRLVIPSEEMVPRM
SYLVYYVLLVIQWFFWCWADKSASYETVDKNSVKSSFYIKKVCPEYKSSFLNQTLFEWFT
VLAYRGWREPLTQNHIWNLTDDYLSKTVVSDWESRWNPKMKKYWKEKAAAVEKTYEVNFK
NQKVQVIAESKKLKMPAAPSVIKTLFQCHKWTFFTSLLLKFAADTIQFASPQILSLLIKF
VENTNEPVWKGYFYSVLMFASALIFTVLTQYHFHMVYQLSIKVRSTLVSALFTKSLRLSN
AARRQSTIGEVVNLMSVDVQRFTDVVLYISMIGSAPYQILLSVYFLWEVIGASVLSGVGF
LILLIPLNYFISSKQNKLQVSQMKYKDERMKLVNEILNGIKVLKLYAWEMAFGKQVNNIR
KKELDILKTAAYYRAATSFIWTCAPFLVKLNLFIFIKSISVFPFYLDDAIKVNDGEFAWD
NTIERPTLQNINFSIKPGELVAVVGQVGAGKSSFLSAILGEMEKRNGTVGIKGNVAYVPQ
QAWIQNMTVRENILFNKPYRSDLMKKVLDGCSLNRDLQLLSGGEEAEIGEKGVNLSGGQR
QRISLARAVYQNADIYLLDDPLSAVDSHVGQHIFENIISNNGLLKNKTRVFVTHGLGYLK
NVDKIIVLNNGTISEIGTYNELLSRKGAFAKLIETYIQERNEDETFSDDGSDGSRKRAKT
SNQFDTDDYVKDHERAYSKMLSSKKKQNEGKLIQEEEAAVGNIKAKVYLDYVKAIGFFST
FVITMLYITSNGFSVGASFWLADWSYDANRYANETTSTDVRLGIYASLGILQGIFILLAT
TLLSYSMVLASRDIHESLLNNLLRSPMSFYDVTPLGRILNRIGKDIDVIDDTLPLTVRTW
IMAGLGVLSVLLVILISTPIFAAVIVPIAILYYFLQKIYIRSSRQLKRIESVTRSPVYSH
FQESLTGAAVIRAFQVQERFILESERRLDENQTSFYQNEVSNRWLAVRLELIGNFLVLMA
AIFAVISREDKISAGIVGLSVSYALQITQSMNYAVRMTGDLETNIVAVERTNEYMHTPTE
AALTSDERLPNDWPTNGTIQFSDYKLRYREGLELCLKGITCLIRGGEKIGIVGRTGAGKS
SLTLALFRIVEPAGGSLLIDNTDITKIGLHDLRSRLTIIPQEPVLFCGTLRINLDPYEAY
SDQDIWRNLERAHLKAFVSSLPDKLQHMISEGGENLSVGQRQLVCLARALLRKTKILILD
EATAAVDLETDDLIQQTIRLHFSDCTVLTIAHRLNTIIDNDRMAKDAGLV
NT seq 4293 nt   +upstreamnt  +downstreamnt
atgcaaaaaatatttcttgcaataatttctatttctgaagtgattaaccaaattaaaaca
attgctgttaggagaaatagtttaaaatcagcaccagcgatgagtgtaaagtggaataat
gcaacattccatagcatttatggaatagaacgattttgcggagaacctttgtggataact
gcgtgcgggcttgtcattgcaacagcggtttgttggatttcaatgctaatactcaaaaag
tcaagtcaacgcgacatatatgatgcagattttgtaggtccactactcttatgcatttca
atgattgatctattaattttacaaatagcatgccgtcaaagaggtttcgttacatctgga
gttgtatttttatcactgactgcatttgtaatttgcggatcgatagaattctcctactgg
gttaaccactctaaaagcgtaacttttgctttctgtttcttttttcatctaattcagtat
tttcaatttataaaattgaagcgtttagtgattccatcggaagaaatggttcccagaatg
agttacctagtttattatgtactgttggttattcaatggtttttctggtgttgggctgac
aagtcagcttcatatgaaactgtcgacaaaaattctgtaaaatcctcattttatataaaa
aaggtgtgtccagaatataaatcatcatttcttaatcaaaccttgtttgaatggttcaca
gtcctggcttaccgaggttggcgtgagccactcacccaaaaccatatttggaatctaacg
gacgattatttgtcaaaaactgttgtctctgattgggaatctagatggaatcccaagatg
aaaaaatattggaaagaaaaagcagccgctgttgaaaaaacctacgaggtaaatttcaaa
aaccaaaaggtccaagttatcgccgaatcaaaaaagctgaaaatgccagcagcgccatca
gttataaaaactttatttcaatgtcacaaatggacttttttcacttctcttctattaaaa
tttgcagcagatacaattcagtttgccagtccacaaattctcagcctgctgattaaattc
gtagaaaatacaaacgagcccgtatggaaaggttacttttattcagttctgatgtttgcg
tccgcacttatatttacagttttaacgcaataccatttccacatggtctatcagctgtca
attaaggttcgatcaacgcttgtatcagcgttattcacaaaatctctccgcttatcaaac
gctgctagacgtcagtcgaccataggggaagttgtaaacctcatgtctgttgatgtgcaa
cgttttaccgatgtcgttctttacatttctatgatcggatcagcaccgtatcagatactt
ctatccgtctactttttatgggaagttattggagcgtctgttttatcaggtgtcggattt
cttatccttctcatcccattaaattatttcatttcaagcaaacaaaataagctccaggtt
tctcaaatgaaatacaaggacgaaagaatgaaattagtcaatgaaattttgaatggcatc
aaagtgcttaaattatatgcatgggaaatggcatttggaaaacaagtgaacaacattcga
aaaaaggaacttgatatactgaaaacagctgcttattatcgcgcggctacttcttttatc
tggacatgtgctccgtttttggtaaagcttaatttattcattttcatcaaatctatttca
gtttttcctttttatttagatgatgctataaaagtcaatgatggtgaatttgcatgggac
aatacgatagaacgccctactttgcaaaatataaatttttctataaagccaggagaatta
gtagctgtcgttggtcaagtcggagcgggaaaatcatcatttctttccgccattctcgga
gaaatggaaaaaaggaacggaaccgttggaatcaaaggaaacgtagcttatgttcctcaa
caggcgtggattcaaaatatgacagttcgtgagaatattcttttcaacaagccatatcgt
tctgatctgatgaaaaaagtgttggatggttgcagtttgaacagagatttgcaattacta
tccggcggagaagaagctgaaattggggaaaaaggtgttaatttgagtggtggccagcga
cagaggatcagcttagcacgagctgtttatcaaaatgcagacatctaccttttggacgat
ccactttcggcggtcgatagccatgtgggtcagcacatctttgaaaatatcattagcaac
aacggcttgctcaaaaataagacacgagtgttcgtcacgcacgggctgggttatttgaaa
aatgttgataagataattgttctgaacaatggaaccatttctgaaatcggcacgtacaat
gaactgctttctcggaaaggtgcatttgcaaaactgattgaaacatacatccaagagaga
aatgaagacgaaactttcagcgacgatggctccgatggaagtagaaaaagagccaagact
agcaatcagtttgacacggatgactatgtcaaagatcatgaaagggcatacagtaaaatg
ctgtcaagcaaaaagaaacaaaacgaaggaaagctaattcaagaagaggaggctgctgtg
ggaaatataaaagcgaaggtgtatctagattacgtaaaagcaatcggctttttttcaaca
tttgtaattacgatgctatacatcacaagcaacggattcagtgttggtgccagcttttgg
ctagccgattggtcatacgatgcaaacagatatgcaaatgaaacgacatcaacagatgtt
cgacttggtatatacgcatcattaggaattttgcaagggatttttattttgctggccaca
actctgctatcctattctatggtgctggccagcagagatatacacgaaagtcttttgaac
aatttgcttcgatctccgatgagcttttacgatgtcactccgttggggcgtatcttgaat
cgcataggaaaggatatcgacgttatcgatgatactttgcctcttacagtgagaacttgg
ataatggctggtctaggcgttttatcagtactgcttgtcatacttatcagtactccaata
tttgctgccgtaattgttccaatagcaatactgtattactttttacaaaaaatctacata
cgctcttcacgtcagctgaaacgaattgaatctgtaaccagatctcctgtctacagtcat
tttcaagaatcactcactggtgcggctgttattcgcgctttccaagttcaagaacggttt
attcttgaatcagagcgacgcctggatgaaaaccaaacatcattttatcaaaatgaagta
tcgaacaggtggctagcagtacggttggaattgataggcaactttttagtgctcatggct
gctatttttgcagtaatcagtcgtgaagataaaatttctgcaggaattgttggtttatct
gtatcctatgctttacagattacacaatcaatgaattatgcggttcgcatgacgggtgat
ttagaaacgaacatagttgctgtggaacgtacaaacgagtacatgcacactccaaccgaa
gcagcactcacgtctgatgaacgtttaccgaatgactggccaacaaatggaaccatccaa
ttttcagactacaaactacgctatcgagaagggctcgagttatgtctcaaagggattact
tgcttgattcgtggcggtgaaaaaattggaattgtcggacgaactggtgctgggaagagt
tctctaacacttgctctgtttcgcattgtcgagccagccggtggttcgttgcttatagat
aacacagacattacaaaaattggtctgcacgatttgcgttcaagattaacaatcattcca
caggaacctgttctattctgcggtactctgcgaataaatctggacccttatgaggcttat
tcagatcaagatatctggagaaatcttgaacgtgctcatttgaaagctttcgtttcaagt
ctacccgacaaacttcagcacatgatttctgagggcggtgaaaatttgagtgtcggtcag
agacagctcgtttgtctagcaagagcgttgttgcgcaagacgaaaattctcattttggat
gaagcaacagcagcagttgatttagaaactgacgacttgattcagcaaactattcgtcta
cacttctcagactgcactgtattgacaattgcacaccgattgaatactatcatcgacaat
gatcgtatggcaaaggatgcaggactcgtgtaa

DBGET integrated database retrieval system