Trichinella spiralis: Tsp_08955
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Entry
Tsp_08955 CDS
T01609
Name
(RefSeq) hypothetical protein
Organism
tsp
Trichinella spiralis
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Flavi_NS5
Motif
Other DBs
NCBI-GeneID:
10902501
NCBI-ProteinID:
XP_003382098
LinkDB
All DBs
Position
Unknown
AA seq
1236 aa
AA seq
DB search
MVRRRYQRAQPSNSRRAAELVAESGGLRTFSVFAQNTASDSNVTAVTMMSLPIPFKDVFK
KIFKKEVDTKYKDPISGIRKLSHEVCTAFLMKVLPCQRKPVDDALIYLLLGVFDPKKEVA
VTAKDGINFFNSVTNTEFNSLFTENWCRTCCRMLINDEGTIPALSELDSRLDVTLSICLE
SLSWALGRSLITEGSPQFGVVQSLGKCITFWDLPLLCDEKLDLVNSWYRTVQSLVPVFIH
SSQSLILKRLYTSIQKSMTSIQLCTFRYMFGVISELNKLVEDVWVHVDCGRFISCLATAI
SDSLDSDSLCDGAKLFAPFFAILPPASDDVKIQRIGLVVTNLACCKDFVEFVIKLSDMNS
SFKPFLEDLCKHVLLMVDSLLEDDTVASENLSLLISNLLYPESALLHRFIKPIFEQILDT
QRFWLLNQNCDFDENLEKFKKLCEMERSIETDASKYVKKIYESMSNVNRFLLLESNDRVS
AMQIYFLLVNLMNEEDRTMALDRIYKMEHFSIIETIAALTSSNKMKFDFSRYHPADSARR
FLNCLLHDDCLTIEKSCKEVANLLLTFLKEIKTEESPLNVILNREALRHWSNVAKVAVLA
RGLFMCEEFWNGHLKEEACRLLITLFTYCYGEHGKNVICSLESDVDTLRGSVTIALLYAF
HTITSMGEFSVADSLLEQMSSLVREEVFEKELSQERISYAKEYAKVIFHCMNHCKQVDSA
YSTKFICDQLLPSHDQWIKFMDTLASEWRALAVVNNALPASILNADNFSGEVFPRNLAED
EENMCRYLNMRSYFCLIGVFCANVAKSKAADKPVSIQYIRQLFDIFGTAQYLHLARSNCF
DFGFFKQFDSILTDTQYCDDRLSCFVFHLIKGKMVPNFVFEFDGSDEPLCLLGLSNLLAK
DVKLLNKLSHDDGFSDVVGISDEEGSESKSFAASDFSARLKGIQFVVHCIMGLHCCNMLS
EKLNYNKFTHLTEEEQLQCKQEWFQFFLCQCIDNHLDTFFYHAENFSNCTMRRLLIYRLA
VFISSLPRDALMKPVKNVLLSAKLSALKCDYFSFIYPESLQTIISRMLMLLRKQTATSFI
FGLAAYFCLRKEVPSYFHEFLDDVRQASSVSRFSNSFLIFMYKYMIIWKLLFEYIAIVDK
SQQDGYREWLYQQQHFIHLWRILVTFFVEHPADVEQVKKAINLFSPIESGRNAQKMNIVM
FTDDVFNKISGENFFFYLLVKQGMQSVFAFFKNHFF
NT seq
3711 nt
NT seq
+upstream
nt +downstream
nt
atggtgagaagaaggtatcagcgtgcgcagccatcgaatagtagacgggcagctgaactg
gtcgcagagtccggtgggctgagaacattttccgtttttgcacagaacactgcctcggat
agcaatgtgacagctgtaaccatgatgtcattgccaattccatttaaagatgtttttaag
aaaatttttaaaaaagaagtcgataccaagtacaaggacccgatttcaggaatacgaaag
ttgtcacatgaagtttgtactgcctttttgatgaaggtgttgccatgccagcggaagccg
gtggatgatgcactgatttatttactgttgggcgttttcgaccccaaaaaggaagttgca
gtcaccgccaaagacggaatcaattttttcaatagtgttacaaatactgagtttaactct
ctttttacagaaaattggtgtcgaacatgttgtcgaatgctaataaacgacgaagggacg
atccccgctctgagcgaattggattcgagattggacgtgacgcttagcatatgcttggaa
agcttaagctgggcgttgggcagatctttaatcacggaaggatcacctcaatttggcgtg
gtgcagtcgttagggaagtgcatcactttttgggatttaccacttttgtgcgatgaaaaa
ttggatcttgtcaattcttggtatcgaacggttcaatctttagttccggtttttatacac
tcatctcaaagtttgatactgaaaagactgtatacttccatacaaaaaagcatgacatcc
atacaactgtgcacatttcgttacatgttcggtgtgatatccgaattgaataagttggtg
gaggatgtttgggtgcatgttgattgtggacgatttatttcttgccttgcaacagcaatt
tcggattcactggacagtgatagcctgtgcgacggtgcgaaattgtttgcaccatttttt
gctattttgccacccgcatcagacgatgtgaaaatacaacgaataggacttgtcgtaacc
aatttggcatgttgtaaagattttgtggaatttgtaattaaactgagcgacatgaattca
agttttaagccgttcttggaagatttgtgcaagcacgttttgttgatggttgatagtttg
ttggaagacgacactgttgcaagcgagaatttatctttgctcatttcgaaccttctgtat
ccagaatcggcattgttgcatcgatttataaagccgatatttgagcaaattttggatacg
caacgtttttggttgttgaatcaaaattgtgattttgatgaaaatttggaaaagttcaaa
aagctgtgcgaaatggagcgcagcattgaaaccgatgcttcgaagtacgtgaaaaagatt
tacgaatcgatgagcaacgtgaacagatttttactgttggaatcgaacgaccgtgtatcg
gcgatgcaaatttattttttgttggtcaacttgatgaatgaagaagaccgtactatggct
ttggatagaatttacaaaatggaacacttttcaatcatagaaacgattgccgcattgact
tcatcgaataagatgaagttcgattttagccgatatcatccggctgattcggcgcgacgt
tttttgaactgtctattgcacgatgattgtctgacaattgagaaatcttgcaaagaagtg
gcaaatttacttttgacatttttgaaagaaattaaaactgaagaatcccctttgaatgtt
attctcaatcgtgaagcgttacgccactggtctaacgtggcgaaagttgccgttttggcg
agaggtttattcatgtgtgaggaattttggaatggccatttgaaagaagaagcatgccga
ttgttgattactttatttacatattgttatggtgaacatggcaagaatgtgatttgttct
ttagaatcagatgtcgatactctgcgcggttctgttacaatagcgttgttgtatgctttt
catacgataacatcgatgggcgagttctccgtggcagattctctgctggagcagatgagt
tcgcttgtcagagaggaggtttttgaaaaagagttaagccaagaaaggatatcgtatgcg
aaagaatacgcgaaggtgatttttcactgcatgaatcattgcaagcaagtcgattctgct
tactctacgaaatttatttgcgatcaactgttgccttcacacgatcagtggatcaaattt
atggacactttggcttctgagtggcgtgcattggccgttgtcaacaacgctttacctgcg
tcaattttgaatgcggacaatttcagcggggaagtgttcccacgaaatttagccgaagac
gaagagaacatgtgtcgatatttgaatatgcgcagctatttttgtctgatcggggtattc
tgtgccaacgtggccaagagcaaagccgccgacaagcccgtttcgatccaatatattagg
cagttgttcgacatttttggaaccgcccaatatttgcatcttgccaggtcgaattgcttt
gattttggctttttcaaacagttcgattcaatactgaccgacacccagtactgcgacgac
cggctcagctgttttgtcttccacttgatcaaaggtaaaatggttcccaatttcgtgttc
gaatttgacggctcggacgaaccgttgtgcttgctcggcttgagcaatttgcttgccaag
gacgtgaaattgttgaacaaactttcccacgacgacggtttttctgacgtggtgggcatc
agcgacgaggaaggatccgaatcgaagagtttcgccgcgtcggatttttccgcccgtttg
aagggcatacagtttgtggtgcactgcatcatgggtttgcactgttgcaacatgttgtcg
gaaaaattgaattacaacaaatttactcatttaacagaagaagaacaattgcagtgcaaa
caagaatggttccaatttttcctctgccaatgcatcgacaatcacttggatacattcttt
tatcatgcggagaatttttcaaactgtacaatgcgtcgattgctgatctacagactcgca
gttttcatttcatctcttcctcgtgatgctctgatgaaacctgtcaaaaacgttttgctg
tctgctaagctttcagctttgaagtgcgattatttttcgttcatctatcctgaatccttg
caaactataatcagtcgaatgctgatgttgttgcgcaaacaaacagcgacttcgttcatt
tttggacttgcggcgtatttctgtttacgcaaggaagtgccaagttattttcatgaattt
ctggacgatgtcagacaagcttcgagcgtcagtcgtttcagcaattcgtttttaattttc
atgtacaaatacatgataatatggaaattgctgtttgaatacattgccattgttgataaa
tcacaacaagatggctaccgggaatggctgtaccagcagcagcattttatccatttgtgg
agaattttggtgacgttttttgtcgaacatccggccgatgtggaacaagtgaaaaaggcg
atcaatcttttcagcccaattgaaagtggacgaaatgctcaaaagatgaacattgtcatg
ttcactgacgatgtgttcaacaaaatttctggtgaaaactttttcttttatctattggtt
aaacaaggaatgcaaagtgtatttgcattttttaaaaatcactttttttag
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