Treponema succinifaciens: Tresu_1568
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Entry
Tresu_1568 CDS
T01461
Name
(GenBank) UvrABC system protein A
KO
K03701
excinuclease ABC subunit A
Organism
tsu
Treponema succinifaciens
Pathway
tsu03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
tsu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
Tresu_1568
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tsu03400
]
Tresu_1568
DNA repair and recombination proteins [BR:
tsu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Tresu_1568
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
Tresu_1568
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrA_inter
UvrA_DNA-bind
ABC_tran
SMC_N
AAA_29
nSTAND1
AAA_16
RsgA_GTPase
AAA_21
AAA_23
BCA_ABC_TP_C
AAA_22
DnaJ_CXXCXGXG
NACHT
Viral_helicase1
cobW
YhfH
Motif
Other DBs
NCBI-ProteinID:
AEB14468
UniProt:
F2NT16
LinkDB
All DBs
Position
complement(1696950..1699889)
Genome browser
AA seq
979 aa
AA seq
DB search
MNAFNDEKIVIQGAREHNLKNISVEIPRNKLVAISGLSGSGKSSLAFDTLFAEGQRRYME
SLSSYARQFLGRMDKPDVDLITGLSPAISIEQKTTHKNPRSTVGTVTEIYDYYRLLYARI
GKPHCPNCGREIKEQSVDQIIETILSWSQGTKLTILSPVIRGKKGEHQKVIDDAKKSGFA
RARIDGLMVELEDSIKLDKQKKHTIEIVVDRIVLKPEIRKRLADSVETALQSSNGVIIVL
RRVNKTDEAYENVVHEISAKGKSVDSAADFIEEEVFFSQKNACPDCGISIPELQPRMFSF
NNPFGACPDCTGLGEKMEYDKNLIAPDSSLSFNEYGIQAYNPESSWNHAMFEAVANEAGF
TLETPLKDLTKKQTDFLWNGDAQKNIKWVYKKQSGEGTSSYNRPWLGIFGDLRRRYNEAW
GENARESLEKFMSHKECASCHGKRLRPESLGVTVGGKNIWDLTEFSVTETIDFFEKLELS
ETEKKISAQILKEIKSRLSFLKNVGLEYLTLQRSAATLSGGEAQRIRLSTQIGSGLTGVM
YILDEPSIGLHQRDNQRLIDSLLYLRNLGNTVIVVEHDEQTLLTADYLVDIGPGAGVHGG
KIMAAGTPQEVMKIPESLTGQYLAGKIRMEIPKQRRTGNGNFIKIQNVTEHNLKNVSVEI
PLGTFTCITGVSGSGKSTLLNDVLFPAISNKIMKSELPVGAYKKISGLENIDKVISIDQS
PIGRTPRSNPVTYIGVFDKIRELYASIPEAKAKGYKSGRFSFNVKGGRCEACQGAGTLTI
EMNFLPDVFIPCDVCHGKRFNQETLDILYKGKSISDVLDMTIEEAADFFAGIPHIARKLE
TLKSVGLGYIQLGQNALTLSGGEAQRVKLASELSRPSTGKTLYILDEPTTGLHFVDIKQL
MSVIQKLVDKGNSVVMIEHNLDVICQADYLIDLGPEGGSGGGSVIATGTPEEVARSKESY
TGKYVSQLLEREKERDRLL
NT seq
2940 nt
NT seq
+upstream
nt +downstream
nt
atgaacgcattcaacgatgagaaaattgtaattcaaggtgcgcgcgagcataacttaaag
aatatcagtgttgaaattcctcgcaataaacttgttgccataagcggactttctggcagc
ggaaaatcatcacttgcatttgatactctttttgctgaaggccagcgcagatatatggaa
agtctttcttcctatgcaaggcagttccttggaagaatggacaagcctgatgtggatttg
attacggggctttctcctgcgatttcaattgagcaaaagacaacccataaaaatccgcgt
tcaacggttggaactgtaacagaaatctatgactattaccgccttctgtatgcaagaatt
ggaaaaccccactgtccgaattgcggtcgggaaatcaaggaacagtcggttgaccagatt
atagaaacaattctttcttggtcgcagggaactaaacttacaattctttctcctgttatc
cgcggaaaaaaaggtgagcatcaaaaagttattgacgacgcaaaaaaatctggctttgcg
cgtgctagaattgatgggcttatggttgagcttgaggattccataaaactggacaagcag
aaaaagcacacaattgaaatcgttgttgaccgcatagttttaaagcctgaaattagaaaa
cgtcttgccgattcagttgaaactgcgcttcaaagttcaaacggtgttataattgttttg
cgccgcgtaaataagactgatgaggcttatgaaaatgttgtgcatgagatttctgcaaaa
ggaaagtctgttgattctgccgcggattttatagaagaggaagttttcttttcacagaag
aatgcctgtcctgactgcggaatttctattccagagcttcagcctaggatgttctctttt
aacaatccgtttggagcctgccccgactgtactggtcttggcgaaaaaatggaatacgac
aaaaatttgattgcgccggattcttcactttcatttaatgagtacggaattcaggcttac
aatcctgaaagttcttggaaccatgcgatgttcgaggctgttgcaaatgaagcaggcttt
actcttgaaactccgctgaaggatcttacaaagaagcagactgattttttgtggaacgga
gacgcgcagaaaaacataaagtgggtttacaaaaagcaaagcggtgagggaacaagttct
tacaatcgtccttggcttggaattttcggtgatttgcgccgccgctacaatgaagcttgg
ggagaaaatgcaagggaatctcttgaaaaatttatgtcgcataaagagtgtgcgtcttgc
catggaaaacgtcttcgcccggaatctcttggcgttactgtcggcggaaaaaatatctgg
gacttgaccgagttttctgttacagaaaccatagacttctttgaaaaattagagctttct
gaaacagaaaaaaagatttccgcgcaaatattaaaggaaataaaatcacgcctttcgttc
ttgaaaaatgttgggcttgaatatcttacgcttcagcgttcggctgcaactttaagcgga
ggcgaggcgcagcgcataaggctctcaactcagattggctcaggtcttaccggggttatg
tatattctggacgagccttcgattggtctgcatcagcgggataatcagcggcttattgat
tctcttttgtatcttagaaatcttggcaacacggtgattgttgttgagcatgacgagcag
actttgcttaccgcggattatcttgttgacattggtcctggagctggtgtccacggcgga
aaaatcatggcggcaggaactccgcaggaagttatgaaaattccagaaagccttactggc
cagtatcttgcaggaaaaatcagaatggaaattccaaagcaaagaagaactggaaacgga
aactttataaaaattcaaaatgttacagagcacaacttgaaaaatgtaagcgttgaaatt
ccgcttggaacttttacttgcataacgggagtttctggcagcggaaaatcaactttgctg
aatgatgttttgtttcctgcaatcagcaataaaattatgaagagcgagcttccggttggc
gcatacaaaaaaatttcaggcttggaaaatattgacaaagtgatcagcatagaccaaagc
cctattggaagaactccgagaagcaatcctgtaacttacatcggtgtgtttgataaaatc
cgcgagctttacgcaagtattccggaagcaaaggcaaagggctacaagagcggacgtttt
tctttcaatgtaaaaggcggaagatgcgaggcttgccagggagctggaactttgacaatt
gaaatgaattttcttcctgacgtttttattccatgcgatgtctgccacggaaaaagattc
aatcaggaaactttggatatcctttacaagggaaagtccataagcgatgttcttgacatg
acgattgaagaagccgccgatttctttgctggaattccgcatattgcaagaaaacttgaa
accttaaaaagtgttggtcttggctatattcagcttggacagaatgcgcttactttgagc
ggaggagaagctcagcgtgtaaaacttgcatctgaactttcacgtccttcaactggaaaa
actttatatattttagatgagcctacgaccggacttcactttgttgacataaagcagctt
atgagcgttattcaaaaacttgttgacaaaggaaattctgttgtgatgattgaacataat
cttgatgttatctgccaggcggactatttgattgatcttggtcctgaaggaggaagcggc
ggcgggtcggttattgcgacaggaactccagaagaagttgcaaggtcaaaagaaagctac
acaggaaaatatgtttcccagcttcttgaacgcgaaaaagaaagagacaggcttttgtaa
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