Candidatus Thiodictyon syntrophicum: THSYN_01575
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Entry
THSYN_01575 CDS
T05211
Symbol
rimO
Name
(GenBank) ribosomal protein S12 methylthiotransferase
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
tsy
Candidatus Thiodictyon syntrophicum
Brite
KEGG Orthology (KO) [BR:
tsy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
tsy03009
]
THSYN_01575 (rimO)
Enzymes [BR:
tsy01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
THSYN_01575 (rimO)
Ribosome biogenesis [BR:
tsy03009
]
Prokaryotic type
ribosomal protein modification factors
THSYN_01575 (rimO)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
TRAM_2
UPF0004
TRAM
CLP1_P
DEC-1_N
Motif
Other DBs
NCBI-ProteinID:
AUB79775
UniProt:
A0A2K8U2M1
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All DBs
Position
complement(372490..373920)
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AA seq
476 aa
AA seq
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MATRSDSPAGRRAPTPCPAHCPPSRSPALATPDRTPAPAGPPRIGFVSLGCPKATVDSEH
ILTRLRAEGYAITPSYDGAQLVIVNTCGFIDAAVEESLEAIGEALAANGRVVVTGCLGAR
ADLIRAAHPRVLAVTGPHDLDAVMAAVHRELPAPHDPFLDLVPPQGVRLTPRHYAYLKVS
EGCNHRCTFCIIPSLRGDLVSRPLGDILTEAERLVEAGVREILVIAQDTSAYGLDLRYRP
DFWKGRPLTSDLVTLARTLGELPAWVRMHYVYPYPHVDALIPLMAEGVILPYLDMPLQHG
AERVLKAMHRPAAAERVLERLERWRSACPELILRSTFIVGFPGETAAEFECLLDFIRAAR
LDRVGCFPYSPVAGAAANELPDPVPEEVKQERLARFMEIQAQISRDKLAQRIGQRLTVLV
DEVDDDEVIARSVGDAPEIDGVVVIPGAWELDPGDFIEVVVTDSGDHDLWAEPVED
NT seq
1431 nt
NT seq
+upstream
nt +downstream
nt
atggcaacccgatccgactcgcccgccggccgccgcgcgccgacgccctgccctgcccat
tgcccgccatcccggagccctgccttggccacacctgaccgcaccccggcccctgccggc
ccgccccgcatcggcttcgtcagcctgggttgccccaaggcgaccgtggactcggagcac
atcctcacccgcctgcgggccgagggctatgcgatcaccccgagctatgacggggcgcaa
ctcgttatcgtcaacacctgcggcttcatcgacgcggcggtggaggagtccctggaggcg
atcggcgaggccctggccgcaaacggccgcgtggtggtcaccggctgtctgggggcacgc
gcggacctgatccgcgccgcccacccgcgggtgctcgccgtcacgggcccgcacgacctg
gacgcggtgatggccgccgttcaccgggaactgccggccccccatgaccccttcctggac
ctggtgccgccgcagggggtgcggctcaccccgcgccactatgcctatctcaaggtctcc
gagggctgtaaccaccgctgcaccttctgcatcatccccagcctgcgcggggacctggtg
agccgcccgctgggcgacatcctgaccgaggccgagcgcctggtggaggccggggtgcgt
gagattctggtcatcgcccaggacaccagcgcctatggcctggatctgcgctaccggccg
gacttctggaagggccggccgctcaccagcgatctggtcacgctggcccgcaccctgggt
gaactgccggcctgggtgcggatgcactatgtctatccctatccccatgtggacgcactg
atcccgttgatggcggagggggtgatcctgccctatctcgacatgccgctgcagcacggc
gccgagcgcgtgctcaaggccatgcatcgaccggccgccgcggagcgcgtcctggagcgg
ctggagcgctggcgctcggcctgcccggaactcatcctgcgcagcacctttatcgtcggc
ttccccggggagacggcggcggagttcgagtgcctgctggacttcatccgcgccgcacgc
ctggaccgggtcggctgtttcccctactcgccggtggcgggggcggcggccaatgagctg
ccggacccggtgccggaggaggtcaaacaggagcgcctggcgcgcttcatggagatccag
gcgcagatcagccgggacaaactcgcccaacggatcgggcagcgtctcacggtgctggtg
gacgaggtggacgatgacgaggtcatcgcccgcagcgtcggggacgccccggagatcgat
ggcgtcgtcgtcatccccggcgcctgggaactggaccccggcgacttcatcgaggtcgtg
gtgaccgactccggcgaccatgatctgtgggccgagccggtggaggattga
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