Candidatus Thiodictyon syntrophicum: THSYN_18445
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Entry
THSYN_18445 CDS
T05211
Name
(GenBank) excinuclease ABC subunit C
KO
K03703
excinuclease ABC subunit C
Organism
tsy
Candidatus Thiodictyon syntrophicum
Pathway
tsy03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
tsy00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
THSYN_18445
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tsy03400
]
THSYN_18445
DNA repair and recombination proteins [BR:
tsy03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
THSYN_18445
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrC_RNaseH_dom
GIY-YIG
UVR
HHH_5
HHH_2
Motif
Other DBs
NCBI-ProteinID:
AUB82721
UniProt:
A0A2K8UCE1
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All DBs
Position
complement(4428915..4430771)
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AA seq
618 aa
AA seq
DB search
MKTPGVSEGAPAPGSDPRERLAQLPEGPGVYRLLDAQGTVLYVGKAKNLKRRVASYFSRA
LNQRLLVMVGQVADIEVTVTRGEGEALLLESNLIKSLKPRFNVLLRDDKSYPFIRLSTQD
AFPRLAFYRGPRKGPGRFFGPYPSAWAVRETLQLLQRLFPVRQCEDSFYRTRSRACLQYQ
IKRCTGPCVGLVSEAVYAQDVAHTTKFLEGRTDEVITELGVAMERAAAALEFERAAVLRD
QVATLRRIQERQYVSGEGGDLDIIGCAQEGGQCCVQVFFIRGGRNLGNKAFFPLAPADTQ
EGTLLAEFLTQFYADKEVPGELICSAEPDDLDLLEAALAEHAGHRVQIRSRVRAERARWL
EMARGNAAVALKSRLGSQAGYSLRLTALQEALALPEPPTRMECFDISHTMGERTVASCVV
FDDAGPRKSDYRRFNIEGITPGDDYAAMHQALTRRYTRVQQGEYPVPDLVFIDGGRGQLG
AVAGALQELGLGTLTLVGVAKGPDRRPGTEQLWLLGQGTPVILPADSPALHLIAQIRDEA
HRFAITGHRSRRAKARTASVLEEIGGIGPKRRQQLLQAFGGMRGLTSAGVEDIARVAGIS
RDLAQRVHDSFHPDAPAP
NT seq
1857 nt
NT seq
+upstream
nt +downstream
nt
gtgaagaccccgggagtctctgagggcgcgccggcgccgggctccgacccccgcgaacgc
ctcgcgcaactgcccgagggacctggggtctaccgcttgctggacgcgcaggggacggtg
ctctatgtcggcaaggcgaagaacctcaagcgccgggtggcgagctatttcagccgtgca
ctgaaccaacgcctgctggtgatggtgggccaggtggcggacatcgaggtgacggtgacc
cgcggcgagggcgaggccctgctcctggagagcaaccttatcaagtcactgaagccgcgc
ttcaacgtcctgctgcgcgacgacaagagctatcccttcatccgcctgagcacgcaggat
gccttcccgcggctcgccttctatcgcggtccgcgcaaggggcccgggcgcttcttcggg
ccctatcccagcgcctgggcggtgcgcgagacgctgcaactgctgcaacgactcttcccc
gtgcgccagtgtgaggacagcttctatcgcacccgctcgcgtgcctgtctccagtaccag
atcaagcgctgcaccggaccctgtgtcgggctggtgagcgaggcggtctatgcgcaggac
gtggcccacaccaccaagttcctggagggccgcacggacgaggtgatcaccgagttgggc
gtcgccatggagcgggcggccgccgccctggagttcgagcgcgccgccgtgctgcgcgac
caggtcgcgaccctgcgccgtatccaggagcgtcaatatgtgagcggggagggcggcgat
ctggacatcatcggctgcgcccaggagggcggccagtgctgtgtccaggtcttcttcatc
cgcggcggccgcaacctgggcaacaaggccttttttccactcgccccggcggacacgcag
gagggcacgctgctggccgagttcctcacccagttctatgcggacaaggaggtgccgggt
gaactgatctgctcggcggaacccgacgacctggacctgctggaggccgccctggcggag
cacgccggtcaccgcgtgcagatccgctcgcgggtccgcgccgagcgcgcccgctggctg
gagatggcgcgcggcaacgccgcggtggcactcaagtcccggctcggcagtcaggccggt
tacagcctgcgcctcaccgcgctgcaagaggccctggccctgccggaaccgcccacccgc
atggagtgcttcgacatcagtcacaccatgggcgagcgcaccgtcgcctcctgcgtggtg
ttcgacgacgccggtccgcgcaagtcagactatcggcgcttcaatatcgagggcatcacc
ccgggcgacgactatgccgccatgcaccaggccctgacccggcgctatacccgggtgcag
cagggcgagtatccggtgccggacctggtcttcatcgacggcggtcggggccagctcggc
gcggtggcgggggcgctccaggaactgggactgggcaccctcaccctggtcggggtcgcc
aagggtccggatcggcgccccggcaccgaacagctttggttgttggggcaggggacgccc
gttatactgcccgccgactcgccggccttgcacctgatcgcgcagatccgcgacgaggcc
caccgcttcgccattaccggccaccgcagccgccgggccaaggcgcgcaccgcctcggtc
ctggaggagatcggcggtatcggtcccaagcggcggcagcaactcctccaggccttcggg
ggtatgcgcggactgaccagcgccggggtggaggacatcgcccgggtcgcgggtatcagt
cgcgacctggcgcagcgcgtccacgactcctttcatccagatgcgcccgccccctga
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