KEGG   Candidatus Thiodictyon syntrophicum: THSYN_18445
Entry
THSYN_18445       CDS       T05211                                 
Name
(GenBank) excinuclease ABC subunit C
  KO
K03703  excinuclease ABC subunit C
Organism
tsy  Candidatus Thiodictyon syntrophicum
Pathway
tsy03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:tsy00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    THSYN_18445
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:tsy03400]
    THSYN_18445
DNA repair and recombination proteins [BR:tsy03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     THSYN_18445
SSDB
Motif
Pfam: UvrC_RNaseH_dom GIY-YIG UVR HHH_5 HHH_2
Other DBs
NCBI-ProteinID: AUB82721
UniProt: A0A2K8UCE1
LinkDB
Position
complement(4428915..4430771)
AA seq 618 aa
MKTPGVSEGAPAPGSDPRERLAQLPEGPGVYRLLDAQGTVLYVGKAKNLKRRVASYFSRA
LNQRLLVMVGQVADIEVTVTRGEGEALLLESNLIKSLKPRFNVLLRDDKSYPFIRLSTQD
AFPRLAFYRGPRKGPGRFFGPYPSAWAVRETLQLLQRLFPVRQCEDSFYRTRSRACLQYQ
IKRCTGPCVGLVSEAVYAQDVAHTTKFLEGRTDEVITELGVAMERAAAALEFERAAVLRD
QVATLRRIQERQYVSGEGGDLDIIGCAQEGGQCCVQVFFIRGGRNLGNKAFFPLAPADTQ
EGTLLAEFLTQFYADKEVPGELICSAEPDDLDLLEAALAEHAGHRVQIRSRVRAERARWL
EMARGNAAVALKSRLGSQAGYSLRLTALQEALALPEPPTRMECFDISHTMGERTVASCVV
FDDAGPRKSDYRRFNIEGITPGDDYAAMHQALTRRYTRVQQGEYPVPDLVFIDGGRGQLG
AVAGALQELGLGTLTLVGVAKGPDRRPGTEQLWLLGQGTPVILPADSPALHLIAQIRDEA
HRFAITGHRSRRAKARTASVLEEIGGIGPKRRQQLLQAFGGMRGLTSAGVEDIARVAGIS
RDLAQRVHDSFHPDAPAP
NT seq 1857 nt   +upstreamnt  +downstreamnt
gtgaagaccccgggagtctctgagggcgcgccggcgccgggctccgacccccgcgaacgc
ctcgcgcaactgcccgagggacctggggtctaccgcttgctggacgcgcaggggacggtg
ctctatgtcggcaaggcgaagaacctcaagcgccgggtggcgagctatttcagccgtgca
ctgaaccaacgcctgctggtgatggtgggccaggtggcggacatcgaggtgacggtgacc
cgcggcgagggcgaggccctgctcctggagagcaaccttatcaagtcactgaagccgcgc
ttcaacgtcctgctgcgcgacgacaagagctatcccttcatccgcctgagcacgcaggat
gccttcccgcggctcgccttctatcgcggtccgcgcaaggggcccgggcgcttcttcggg
ccctatcccagcgcctgggcggtgcgcgagacgctgcaactgctgcaacgactcttcccc
gtgcgccagtgtgaggacagcttctatcgcacccgctcgcgtgcctgtctccagtaccag
atcaagcgctgcaccggaccctgtgtcgggctggtgagcgaggcggtctatgcgcaggac
gtggcccacaccaccaagttcctggagggccgcacggacgaggtgatcaccgagttgggc
gtcgccatggagcgggcggccgccgccctggagttcgagcgcgccgccgtgctgcgcgac
caggtcgcgaccctgcgccgtatccaggagcgtcaatatgtgagcggggagggcggcgat
ctggacatcatcggctgcgcccaggagggcggccagtgctgtgtccaggtcttcttcatc
cgcggcggccgcaacctgggcaacaaggccttttttccactcgccccggcggacacgcag
gagggcacgctgctggccgagttcctcacccagttctatgcggacaaggaggtgccgggt
gaactgatctgctcggcggaacccgacgacctggacctgctggaggccgccctggcggag
cacgccggtcaccgcgtgcagatccgctcgcgggtccgcgccgagcgcgcccgctggctg
gagatggcgcgcggcaacgccgcggtggcactcaagtcccggctcggcagtcaggccggt
tacagcctgcgcctcaccgcgctgcaagaggccctggccctgccggaaccgcccacccgc
atggagtgcttcgacatcagtcacaccatgggcgagcgcaccgtcgcctcctgcgtggtg
ttcgacgacgccggtccgcgcaagtcagactatcggcgcttcaatatcgagggcatcacc
ccgggcgacgactatgccgccatgcaccaggccctgacccggcgctatacccgggtgcag
cagggcgagtatccggtgccggacctggtcttcatcgacggcggtcggggccagctcggc
gcggtggcgggggcgctccaggaactgggactgggcaccctcaccctggtcggggtcgcc
aagggtccggatcggcgccccggcaccgaacagctttggttgttggggcaggggacgccc
gttatactgcccgccgactcgccggccttgcacctgatcgcgcagatccgcgacgaggcc
caccgcttcgccattaccggccaccgcagccgccgggccaaggcgcgcaccgcctcggtc
ctggaggagatcggcggtatcggtcccaagcggcggcagcaactcctccaggccttcggg
ggtatgcgcggactgaccagcgccggggtggaggacatcgcccgggtcgcgggtatcagt
cgcgacctggcgcagcgcgtccacgactcctttcatccagatgcgcccgccccctga

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