Thermoanaerobacterium thermosaccharolyticum DSM 571: Tthe_1414
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Entry
Tthe_1414 CDS
T01299
Name
(GenBank) DNA polymerase III, alpha subunit
KO
K03763
DNA polymerase III subunit alpha, Gram-positive type [EC:
2.7.7.7
]
Organism
ttm
Thermoanaerobacterium thermosaccharolyticum DSM 571
Pathway
ttm03030
DNA replication
ttm03430
Mismatch repair
ttm03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ttm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Tthe_1414
03430 Mismatch repair
Tthe_1414
03440 Homologous recombination
Tthe_1414
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ttm03032
]
Tthe_1414
03400 DNA repair and recombination proteins [BR:
ttm03400
]
Tthe_1414
Enzymes [BR:
ttm01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Tthe_1414
DNA replication proteins [BR:
ttm03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
Tthe_1414
DNA repair and recombination proteins [BR:
ttm03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
Tthe_1414
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
RNase_T
PHP
DNA_pol3_finger
DNA_pol3_a_NII
HHH_6
tRNA_anti-codon
RNase_H_2
Rv2179c-like
HHH_3
DEDDh_C
DUF655
Radical_SAM
tRNA_anti_2
Motif
Other DBs
NCBI-ProteinID:
ADL68928
UniProt:
D9TM62
LinkDB
All DBs
Position
complement(1420362..1424594)
Genome browser
AA seq
1410 aa
AA seq
DB search
MLPSFFKDDLGINDVEINKISLSLKEKKLILYLPFNLEKEITKLENLKSTIKSKIPQLQN
IEFKFKGSDINDISSIISDHWEDIVKKASEKYPGTLSFIKSCDICIEDNQQVLIKASNEV
AYNFLKKNKINIYICELIKKYYGLNVELILGFDESLNSKVNKKIQKDEEMIVNNIITTPT
EDTQKAASDVNNDDKKVLLGKEINSKVIKISEISQEGDDVTIQGEIFALELREIKSKYLT
TFDITDNTSSFSVKAFFSDEKYNAIKDKLKVGSCVKVRGTVIYDKYERDLIINAKDIEVA
EKIMRIDNSPEKRVELHVHTQMSSMDGVSSAESLIKRASEWGHKAIAITDHAVLQAYPEA
QSAAKKYGVKVIYGVEGYLVNDGVPIVSGNASGTIDDSFVVFDIETTGLSSINDSIIEIG
AVKIKDCQIVDTFETFVNPQIHISNFITKLTGITDDMVKRYPPIDEVLPKFLEFIKGSTL
VAHNANFDVTFIKTKAKNLGIEVDNPVLDTLELSRHMYENLKNYKLDTVAQHLGVSLENH
HRAVDDARATAEIFLKSINKLKENGIEKVNEINSYLKNKVDIKKMPTYHVIILVKNQKGL
RNLYELVSKSNLEYFHRNPRIPKSLLTQMREGLLIGSACEQGEVFRGLISNFDDDKLQEI
IRYYDYLEIQPLGNNEFLIDKGEVNSKEELIKINKRIYELGKRFKKPVVATCDVHFLDPW
DDVYRKILMYGKGFKDADRQPPLYFRTTEEMLSEFNYFDEKTAKEIVIDNPNKIVELIED
VKPIPDGTFPPSIEGAEEELRKLTLNKAHEIYGEKLPEIVEKRLDKELNSIINNGYAVMY
IIAQKLVTKSLNDGYLVGSRGSVGSSFVATMSGITEVNPLPPHYICPQCKYSEFALDGSY
GSGVDMPDKNCPNCGTKMKKDGHDIPFEVFLGFEGDKEPDIDLNFSGDYQPIAHKYTEEI
FGTGHVFRAGTIGTLADKTAYGFVKKYFEEKNLLVHNAEIKRLVMGCTGAKRTTGQHPGG
VMVVPKDRDIYEFTPIQHPADAQDSDIITTHFDYHSISGRLLKLDILGHDDPTVIRMLED
LTGVNAREIPLDDKETMSLFTSVDALNIKPEDINCTVGTLGLPEFGTRFVRQMLVDTKPT
TFAELVRISGLSHGTDVWLNNAQDIIKEGKATLKEVISTRDDIMLFLISKGMDKKLSFKI
MESVRKGKGIKDEEIEEMKKHDVPDWFIQSCKKIKYMFPKAHAVAYVIMAFRIAYFKVHY
PEAFYATYFTVRADEFNLDIMNSIEKIKENIRLIESKGNNATAKEKGLLTILEVGLEMYL
RGLKFTDVDLYKSDAIKFLITKDGILPPLNSLEGIGKQAAKIIAEERKNGKFLSIEDLRN
RTRISKTVIDILKQHRCLQDVPESNQLSLF
NT seq
4233 nt
NT seq
+upstream
nt +downstream
nt
atgctaccttctttttttaaagatgatctcggtataaacgatgtagaaataaataaaata
agtctttccttgaaagaaaaaaagcttatattgtatttaccttttaatttagaaaaagaa
ataacgaaattagaaaatttaaaatctactattaaatcaaaaattccacaattacaaaat
atagagtttaaatttaaaggttcagatatcaatgatatttcttcgattataagtgatcat
tgggaggatattgtaaaaaaagcaagtgaaaaataccctggaacattaagttttataaag
tcttgtgatatctgtatagaagacaaccaacaggttttaataaaagcgtcaaatgaagta
gcctacaatttcttaaagaaaaataaaatcaatatatatatttgtgaattgataaaaaaa
tattatggcttaaatgtagaacttattttaggttttgatgagtcattaaatagtaaagtt
aataaaaagatacaaaaagacgaagaaatgattgtaaataatataattacaactccaact
gaagatacacaaaaggcagcaagcgatgtcaataatgatgacaaaaaagttttacttggc
aaagagataaattcaaaagtcataaaaatttctgaaatatctcaagaaggcgatgatgta
acaatacaaggagaaatatttgcattagaattacgagaaattaaatctaaatacttgacg
acatttgatataacagataatacgtcatcattttcagttaaagcatttttcagtgatgaa
aagtacaatgcaattaaagataaattaaaagtaggaagctgcgttaaagtacgtggaaca
gtcatatacgataaatatgaaagagatttaatcataaatgcgaaagatattgaagttgct
gaaaaaattatgagaattgacaattcaccagaaaaaagagtagaattgcatgtacacacc
caaatgagcagtatggacggcgtaagttctgctgagtctttaattaaaagagcatctgag
tgggggcacaaggccatagcgataacagatcatgcagtcttgcaagcttatcctgaagct
cagagtgctgctaaaaaatatggtgtcaaagtcatctacggtgtggaaggctatcttgtc
aacgatggtgttccgatcgtcagtggaaacgcatcaggaactattgatgacagctttgtt
gtattcgatattgaaactaccggtttgtcaagtatcaatgatagtattattgagattggc
gccgttaagataaaggattgccaaatagtagatacatttgagacttttgtaaatccacaa
attcatatatcaaactttataacaaaattgactggaataacagatgatatggttaaaaga
tatccaccaattgatgaagttttgcctaaatttttggaatttataaaaggttctactctt
gtagcacataatgcaaactttgatgtgacgtttataaaaacaaaagctaaaaatcttggt
attgaagtggacaatcctgttttagatactttagagttaagcagacatatgtatgaaaat
cttaaaaattacaaattggacactgtagcacagcatcttggagtttcacttgaaaatcat
catagagctgtagatgatgctagagcaactgctgaaatttttcttaaaagtattaataag
ttgaaagagaacggcatagaaaaagtaaatgaaataaatagttatttgaagaataaagtt
gacataaaaaaaatgcctacatatcatgtaataatacttgtcaaaaatcagaaaggatta
agaaatttatatgaattagtatcaaagtctaatttggaatatttccacagaaatccaaga
attcctaaaagtttgttaacacaaatgagagaagggttgttaatcggctctgcatgtgag
cagggtgaagtttttagaggattgatatcaaattttgatgacgacaaattgcaagaaata
attaggtattacgattatcttgaaatacagccgctaggcaacaatgaatttttaatcgat
aaaggcgaagtcaatagtaaagaagaactgataaaaataaataagcgcatttatgaactt
ggaaagcgctttaaaaagcctgttgttgccacttgtgatgtgcattttttagatccttgg
gatgatgtttataggaaaatattgatgtatggaaaggggtttaaagatgctgatagacaa
cctccattgtattttagaacaacagaagaaatgttaagtgagtttaattactttgatgaa
aaaactgctaaagaaatagttattgacaatcctaataaaatagttgaattaatagaagat
gttaaaccaattcctgatggtacttttcctccgtcaatagaaggcgcagaagaagaatta
agaaaattgacacttaataaagcgcatgaaatatatggtgaaaagttgccagaaatagtg
gaaaagaggttagacaaggagttaaactctatcataaataatggctatgctgtgatgtat
attattgcacaaaaattagttacaaaatctttaaatgatggttacttagtcggttcgagg
ggctctgttggttcgtcatttgtggcaactatgagtggaataacagaggtaaatccattg
ccaccacattacatatgccctcaatgtaaatattccgaattcgctttagacggaagttat
ggttccggtgtggacatgcctgataaaaattgtccaaattgtggtacaaagatgaaaaag
gatggtcatgatataccatttgaagtatttctcggctttgaaggtgataaggaacctgat
atagatctcaatttttctggcgattatcaaccaatagctcataaatatacggaagaaatc
tttggcacaggacacgtatttagagcaggtactattggtacattagccgataaaactgct
tatggatttgtcaaaaagtattttgaagaaaaaaacttattagtgcacaatgcagagatc
aaaagattggttatgggttgtactggcgcaaagagaacaaccggccaacatcccggcggt
gtcatggtagtacctaaagacagagatatttatgagtttactccaatacagcatcctgcg
gatgcacaagactccgatataataacaacccattttgattatcattctataagcgggaga
ttgctaaaactcgacatattaggtcatgatgatccgacggtaattagaatgttggaggac
ttgacaggtgttaatgcaagagaaataccattagatgataaagagacgatgagtttattt
acaagtgttgacgcgcttaatattaagccagaagatataaattgcacagttggcactttg
ggtctgcctgaatttggtaccagatttgtaaggcaaatgcttgtagacactaaacctaca
acatttgctgagcttgtcagaattagtggtctttcacatggtactgatgtgtggctaaat
aatgcacaggacattataaaagaagggaaggcaacccttaaagaagtaatctctacgaga
gatgacataatgttgtttcttatcagcaaaggaatggataaaaaattgtcgttcaaaata
atggaaagtgttcgaaaaggaaaaggcataaaagatgaagaaattgaagagatgaaaaaa
catgatgttccagattggtttatacaatcttgtaaaaaaattaaatatatgtttcctaaa
gcgcatgctgttgcatacgtaattatggcttttagaattgcttattttaaagtacattat
ccagaggcattttatgcaacatattttacagttagagcagatgagtttaacttagatata
atgaattctatagaaaagataaaagagaatataaggttgattgaatcaaaaggaaataat
gctacagctaaagaaaagggattattgacaatactggaagttggactagagatgtattta
agaggtttaaaattcaccgatgtggatttatataaatctgatgcaattaaatttcttatt
actaaagacgggatattgcctccattgaattctttagagggaattggaaaacaggctgca
aaaataatagcagaagagagaaaaaacgggaaattcctgtctatagaagatttaagaaat
agaaccagaattagcaagacggtaattgacattttaaaacaacacagatgtttgcaggat
gtacctgaatcaaaccaattaagtttattttag
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