KEGG   Thermoanaerobacterium thermosaccharolyticum DSM 571: Tthe_1414
Entry
Tthe_1414         CDS       T01299                                 
Name
(GenBank) DNA polymerase III, alpha subunit
  KO
K03763  DNA polymerase III subunit alpha, Gram-positive type [EC:2.7.7.7]
Organism
ttm  Thermoanaerobacterium thermosaccharolyticum DSM 571
Pathway
ttm03030  DNA replication
ttm03430  Mismatch repair
ttm03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:ttm00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    Tthe_1414
   03430 Mismatch repair
    Tthe_1414
   03440 Homologous recombination
    Tthe_1414
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:ttm03032]
    Tthe_1414
   03400 DNA repair and recombination proteins [BR:ttm03400]
    Tthe_1414
Enzymes [BR:ttm01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     Tthe_1414
DNA replication proteins [BR:ttm03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     Tthe_1414
DNA repair and recombination proteins [BR:ttm03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     Tthe_1414
SSDB
Motif
Pfam: DNA_pol3_alpha RNase_T PHP DNA_pol3_finger DNA_pol3_a_NII HHH_6 tRNA_anti-codon RNase_H_2 Rv2179c-like HHH_3 DEDDh_C DUF655 Radical_SAM tRNA_anti_2
Other DBs
NCBI-ProteinID: ADL68928
UniProt: D9TM62
LinkDB
Position
complement(1420362..1424594)
AA seq 1410 aa
MLPSFFKDDLGINDVEINKISLSLKEKKLILYLPFNLEKEITKLENLKSTIKSKIPQLQN
IEFKFKGSDINDISSIISDHWEDIVKKASEKYPGTLSFIKSCDICIEDNQQVLIKASNEV
AYNFLKKNKINIYICELIKKYYGLNVELILGFDESLNSKVNKKIQKDEEMIVNNIITTPT
EDTQKAASDVNNDDKKVLLGKEINSKVIKISEISQEGDDVTIQGEIFALELREIKSKYLT
TFDITDNTSSFSVKAFFSDEKYNAIKDKLKVGSCVKVRGTVIYDKYERDLIINAKDIEVA
EKIMRIDNSPEKRVELHVHTQMSSMDGVSSAESLIKRASEWGHKAIAITDHAVLQAYPEA
QSAAKKYGVKVIYGVEGYLVNDGVPIVSGNASGTIDDSFVVFDIETTGLSSINDSIIEIG
AVKIKDCQIVDTFETFVNPQIHISNFITKLTGITDDMVKRYPPIDEVLPKFLEFIKGSTL
VAHNANFDVTFIKTKAKNLGIEVDNPVLDTLELSRHMYENLKNYKLDTVAQHLGVSLENH
HRAVDDARATAEIFLKSINKLKENGIEKVNEINSYLKNKVDIKKMPTYHVIILVKNQKGL
RNLYELVSKSNLEYFHRNPRIPKSLLTQMREGLLIGSACEQGEVFRGLISNFDDDKLQEI
IRYYDYLEIQPLGNNEFLIDKGEVNSKEELIKINKRIYELGKRFKKPVVATCDVHFLDPW
DDVYRKILMYGKGFKDADRQPPLYFRTTEEMLSEFNYFDEKTAKEIVIDNPNKIVELIED
VKPIPDGTFPPSIEGAEEELRKLTLNKAHEIYGEKLPEIVEKRLDKELNSIINNGYAVMY
IIAQKLVTKSLNDGYLVGSRGSVGSSFVATMSGITEVNPLPPHYICPQCKYSEFALDGSY
GSGVDMPDKNCPNCGTKMKKDGHDIPFEVFLGFEGDKEPDIDLNFSGDYQPIAHKYTEEI
FGTGHVFRAGTIGTLADKTAYGFVKKYFEEKNLLVHNAEIKRLVMGCTGAKRTTGQHPGG
VMVVPKDRDIYEFTPIQHPADAQDSDIITTHFDYHSISGRLLKLDILGHDDPTVIRMLED
LTGVNAREIPLDDKETMSLFTSVDALNIKPEDINCTVGTLGLPEFGTRFVRQMLVDTKPT
TFAELVRISGLSHGTDVWLNNAQDIIKEGKATLKEVISTRDDIMLFLISKGMDKKLSFKI
MESVRKGKGIKDEEIEEMKKHDVPDWFIQSCKKIKYMFPKAHAVAYVIMAFRIAYFKVHY
PEAFYATYFTVRADEFNLDIMNSIEKIKENIRLIESKGNNATAKEKGLLTILEVGLEMYL
RGLKFTDVDLYKSDAIKFLITKDGILPPLNSLEGIGKQAAKIIAEERKNGKFLSIEDLRN
RTRISKTVIDILKQHRCLQDVPESNQLSLF
NT seq 4233 nt   +upstreamnt  +downstreamnt
atgctaccttctttttttaaagatgatctcggtataaacgatgtagaaataaataaaata
agtctttccttgaaagaaaaaaagcttatattgtatttaccttttaatttagaaaaagaa
ataacgaaattagaaaatttaaaatctactattaaatcaaaaattccacaattacaaaat
atagagtttaaatttaaaggttcagatatcaatgatatttcttcgattataagtgatcat
tgggaggatattgtaaaaaaagcaagtgaaaaataccctggaacattaagttttataaag
tcttgtgatatctgtatagaagacaaccaacaggttttaataaaagcgtcaaatgaagta
gcctacaatttcttaaagaaaaataaaatcaatatatatatttgtgaattgataaaaaaa
tattatggcttaaatgtagaacttattttaggttttgatgagtcattaaatagtaaagtt
aataaaaagatacaaaaagacgaagaaatgattgtaaataatataattacaactccaact
gaagatacacaaaaggcagcaagcgatgtcaataatgatgacaaaaaagttttacttggc
aaagagataaattcaaaagtcataaaaatttctgaaatatctcaagaaggcgatgatgta
acaatacaaggagaaatatttgcattagaattacgagaaattaaatctaaatacttgacg
acatttgatataacagataatacgtcatcattttcagttaaagcatttttcagtgatgaa
aagtacaatgcaattaaagataaattaaaagtaggaagctgcgttaaagtacgtggaaca
gtcatatacgataaatatgaaagagatttaatcataaatgcgaaagatattgaagttgct
gaaaaaattatgagaattgacaattcaccagaaaaaagagtagaattgcatgtacacacc
caaatgagcagtatggacggcgtaagttctgctgagtctttaattaaaagagcatctgag
tgggggcacaaggccatagcgataacagatcatgcagtcttgcaagcttatcctgaagct
cagagtgctgctaaaaaatatggtgtcaaagtcatctacggtgtggaaggctatcttgtc
aacgatggtgttccgatcgtcagtggaaacgcatcaggaactattgatgacagctttgtt
gtattcgatattgaaactaccggtttgtcaagtatcaatgatagtattattgagattggc
gccgttaagataaaggattgccaaatagtagatacatttgagacttttgtaaatccacaa
attcatatatcaaactttataacaaaattgactggaataacagatgatatggttaaaaga
tatccaccaattgatgaagttttgcctaaatttttggaatttataaaaggttctactctt
gtagcacataatgcaaactttgatgtgacgtttataaaaacaaaagctaaaaatcttggt
attgaagtggacaatcctgttttagatactttagagttaagcagacatatgtatgaaaat
cttaaaaattacaaattggacactgtagcacagcatcttggagtttcacttgaaaatcat
catagagctgtagatgatgctagagcaactgctgaaatttttcttaaaagtattaataag
ttgaaagagaacggcatagaaaaagtaaatgaaataaatagttatttgaagaataaagtt
gacataaaaaaaatgcctacatatcatgtaataatacttgtcaaaaatcagaaaggatta
agaaatttatatgaattagtatcaaagtctaatttggaatatttccacagaaatccaaga
attcctaaaagtttgttaacacaaatgagagaagggttgttaatcggctctgcatgtgag
cagggtgaagtttttagaggattgatatcaaattttgatgacgacaaattgcaagaaata
attaggtattacgattatcttgaaatacagccgctaggcaacaatgaatttttaatcgat
aaaggcgaagtcaatagtaaagaagaactgataaaaataaataagcgcatttatgaactt
ggaaagcgctttaaaaagcctgttgttgccacttgtgatgtgcattttttagatccttgg
gatgatgtttataggaaaatattgatgtatggaaaggggtttaaagatgctgatagacaa
cctccattgtattttagaacaacagaagaaatgttaagtgagtttaattactttgatgaa
aaaactgctaaagaaatagttattgacaatcctaataaaatagttgaattaatagaagat
gttaaaccaattcctgatggtacttttcctccgtcaatagaaggcgcagaagaagaatta
agaaaattgacacttaataaagcgcatgaaatatatggtgaaaagttgccagaaatagtg
gaaaagaggttagacaaggagttaaactctatcataaataatggctatgctgtgatgtat
attattgcacaaaaattagttacaaaatctttaaatgatggttacttagtcggttcgagg
ggctctgttggttcgtcatttgtggcaactatgagtggaataacagaggtaaatccattg
ccaccacattacatatgccctcaatgtaaatattccgaattcgctttagacggaagttat
ggttccggtgtggacatgcctgataaaaattgtccaaattgtggtacaaagatgaaaaag
gatggtcatgatataccatttgaagtatttctcggctttgaaggtgataaggaacctgat
atagatctcaatttttctggcgattatcaaccaatagctcataaatatacggaagaaatc
tttggcacaggacacgtatttagagcaggtactattggtacattagccgataaaactgct
tatggatttgtcaaaaagtattttgaagaaaaaaacttattagtgcacaatgcagagatc
aaaagattggttatgggttgtactggcgcaaagagaacaaccggccaacatcccggcggt
gtcatggtagtacctaaagacagagatatttatgagtttactccaatacagcatcctgcg
gatgcacaagactccgatataataacaacccattttgattatcattctataagcgggaga
ttgctaaaactcgacatattaggtcatgatgatccgacggtaattagaatgttggaggac
ttgacaggtgttaatgcaagagaaataccattagatgataaagagacgatgagtttattt
acaagtgttgacgcgcttaatattaagccagaagatataaattgcacagttggcactttg
ggtctgcctgaatttggtaccagatttgtaaggcaaatgcttgtagacactaaacctaca
acatttgctgagcttgtcagaattagtggtctttcacatggtactgatgtgtggctaaat
aatgcacaggacattataaaagaagggaaggcaacccttaaagaagtaatctctacgaga
gatgacataatgttgtttcttatcagcaaaggaatggataaaaaattgtcgttcaaaata
atggaaagtgttcgaaaaggaaaaggcataaaagatgaagaaattgaagagatgaaaaaa
catgatgttccagattggtttatacaatcttgtaaaaaaattaaatatatgtttcctaaa
gcgcatgctgttgcatacgtaattatggcttttagaattgcttattttaaagtacattat
ccagaggcattttatgcaacatattttacagttagagcagatgagtttaacttagatata
atgaattctatagaaaagataaaagagaatataaggttgattgaatcaaaaggaaataat
gctacagctaaagaaaagggattattgacaatactggaagttggactagagatgtattta
agaggtttaaaattcaccgatgtggatttatataaatctgatgcaattaaatttcttatt
actaaagacgggatattgcctccattgaattctttagagggaattggaaaacaggctgca
aaaataatagcagaagagagaaaaaacgggaaattcctgtctatagaagatttaagaaat
agaaccagaattagcaagacggtaattgacattttaaaacaacacagatgtttgcaggat
gtacctgaatcaaaccaattaagtttattttag

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