Thermothielavioides terrestris: THITE_2111015
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Entry
THITE_2111015 CDS
T02228
Name
(RefSeq) hypothetical protein
KO
K18995
ATP-dependent RNA helicase DHX29 [EC:
5.6.2.6
]
Organism
ttt
Thermothielavioides terrestris
Brite
KEGG Orthology (KO) [BR:
ttt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03012 Translation factors [BR:
ttt03012
]
THITE_2111015
Enzymes [BR:
ttt01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
THITE_2111015
Translation factors [BR:
ttt03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
THITE_2111015
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
OB_NTP_bind
HA2_C
AAA_22
nSTAND3
nSTAND1
HA2_N
AAA_29
ABC_tran
AAA_19
ATPase
AAA_23
Rad17
Motif
Other DBs
NCBI-GeneID:
11523646
NCBI-ProteinID:
XP_003651070
JGI:
Thite2_2111015
UniProt:
G2QW02
LinkDB
All DBs
Position
1:complement(join(9777833..9778199,9778300..9780315,9780362..9780459,9780514..9781081,9781132..9781822,9781881..9782646))
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AA seq
1501 aa
AA seq
DB search
MAGKKKTKKPAANPARGFATTSIASKPRVDPAEAAGRSDAANLGTPAGKPNGDAAAPPST
DAPPTAASNADANTAAQNAPKQDLTPEEFERHLEESELQQLVEKYAQKVRRDVQRQKARL
ETDRRLLRAAAEPINIKKWLPQELLDHIMGMIQAEGRFAASSVSSEGASSRLPPEQDLIV
KLWTLQETLEGAGFPADRIQPALQFVLDIAPSLSPNGKGDSIWGLEEVLDWLARECSPEE
LPDYSGRKTGSKSQNGTPRDTPSRSGTPVEFGPRPGSKAKGAALNRSHPPSPKRPTVTFD
EDIEPDQLLPFYLDAKTKLFAIQRPRQDTAKRKGPKEKPENPSDQEEALLLAKIDRIERD
VLFDKYVAEQQWRAKKIELEKEYASARAEEKKKEAAEEPPPPPSEPDDVNAEAERIAAEV
LAEGDDDDDAIAGLFASLPVSEVDPETGKTNTVVQGTDGAKITIRDFGEWTGVTPMRALE
EACRSRDSSVRISYHVLSDVVFARRHAVNIVWSKPQEIPPAPEIAELEVFTSPTQFVYKM
ISVATPDAKQSEAYIATAALFCIFGSSAKDEKVALRLPGPFKDLWSEYAEAKKDKADEQD
RAVLRRLRDLVRTRMEQELEDGVLVQGFKGRGLAKNQTDSEQSDQERAKRQPHDPEYYRN
IWLQKSSTPKFRQMLESRMQLPMWQFRQQVVDAVERDQVVIICGETGCGKSTQVPAFLLE
HQLLQGKPCKIYCTEPRRISAISLARRVSEELGEGKGDLGTSRSLVGYSIRLESNTARET
RLVYATTGIVMRMLEGSNDLEEITHLVLDEVHERSIDSDFLLVVLKKLLTRRKDLKVVLM
SATVDAQRFSEYLDGAPVLTVPGRTFPVRVAYLEDAVELTGYTVDQRKQEKLTELDDDVE
LEVDTSSKPELLKELRQYSARTRNTLAQMDEYRIEFDLVVELISKIAVDPEYEPYSKAIL
VFLPGIAEIRTLNDMLLGDRFFADNWLVYPLHSTIATEEQEAAFLIPPPGMRKIVLATNI
AETGITIPDVTCVIDTGKHREMRFDERRQLSRLVDSFISRANAKQRRGRAGRVQEGLCFH
LFTKYRYDTSMNDQQTPEMLRLSLQDLAIRVKICKIGGIEETLRQALDPPSPKNIRRAID
ALVDVRALTATTEELTPLGVQLARLPLDVFLGKLILLGTVFKCLDMAITVAAILSSKSPF
VAPFGQRNQADSVRRGFRKGDSDLLTVYNAYSAWKRVCQSATGGGAEFQFCRKNFLSQQT
LANIEDLKGQLLIAVADSGFLQLTADERQTLSRLRFSGRRRHQAFFEVPKRVDVNSDNEL
VAQSVIAWSFYPKLLVRDPGSKGFRHVGTNQSISLHPSSVNKGFTDLRWLSYYHIMQSKA
FYNAHETTAADPFAIALLCGDARADLHAGVLVLDGNRARFALPDWKSALVVKTLRARLRD
LLTRCFRYPGRPLTPQHERWLDAWQRVFALAQEARERAAAAAAVSAAAATVTVVEGGTWE
R
NT seq
4506 nt
NT seq
+upstream
nt +downstream
nt
atggccggcaagaagaagaccaaaaagcccgctgcaaacccggcgcgtgggtttgcgacc
acgtccatagcgtcgaagcctagagtcgaccccgctgaagctgccggccgcagcgatgcc
gctaaccttggcaccccggcaggcaagcccaacggcgatgctgcggccccgccgagcacc
gatgccccgccaaccgccgcctccaatgccgatgccaacacggcagcacaaaatgcgccg
aagcaggacctgacccccgaggagttcgagaggcacctggaagagtcggagttgcagcag
ttagtcgaaaagtatgcccagaaagtgcggcgggatgtgcagcggcagaaggcacgcctc
gaaaccgacaggcgcctgctccgggcggcagcagagcccataaacatcaaaaaatggctg
ccgcaggagctgttggaccatatcatgggcatgatccaagcggagggccggtttgccgcc
tctagcgtttcctctgagggagcatctagtaggctgccccccgagcaggacctcatcgtg
aagctgtggaccctgcaggagacgctcgagggcgctggctttccagccgacaggatacag
ccagcgctgcaattcgtcttggatattgcgcccagtctctcgccgaatggcaagggggat
tccatctggggtctcgaagaggtgctcgactggctggcaagggagtgttcccccgaggag
ctgccggactactcggggcgcaaaacaggcagcaaatcgcaaaacggcaccccgagagac
actccctccaggtcaggcactccggtcgagttcgggccccggcccggctccaaggccaag
ggggccgcgctcaaccggtctcacccgccctcgccgaaacggccgaccgtgacattcgat
gaagatattgaacccgaccagctgcttcctttctatctcgacgccaagacgaagctgttt
gccatccagcgcccacgccaggacaccgccaagcgcaaggggccgaaggagaaaccggag
aacccgagcgatcaggaggaagcgctactgctagcgaagatagaccggatcgaaagagat
gtgctgttcgacaaatacgtggccgaacagcaatggcgggcgaagaagatcgaactggag
aaggagtacgcctcggcgagggccgaggagaagaaaaaggaggcagcagaagagcctcct
cccccaccaagcgagccagatgatgtcaatgcggaagctgaacgtatcgcggccgaagtt
cttgccgagggcgacgacgacgacgacgcgatcgccggcttgttcgcgagtctccccgtg
agcgaggttgatcccgaaacgggcaagacaaacacggtggtgcaaggaaccgacggtgcc
aagatcaccatccgggactttggagaatggaccggggtgactccgatgcgggctctggaa
gaggcctgccgctcaagggactcctccgtgagaatatcgtaccatgtcctatccgacgtc
gtttttgcgaggcgccatgcggtcaacatcgtctggtcgaagccgcaggagattccacct
gcccccgagatcgcagaactcgaagtgttcacgtcgcctacgcagttcgtctacaaaatg
atatccgttgccaccccagatgcgaagcagtccgaggcctacattgcgaccgcagcgttg
ttctgtatctttggatcctcggccaaggatgaaaaggtcgcgttgcgattgcctggcccg
ttcaaggacctatggtctgagtatgcggaggcaaagaaagacaaggccgacgagcaagat
cgggccgtcctcaggcgtcttcgagacctggtgcgcacgcggatggagcaggagctcgag
gacggcgtgctcgtccaaggcttcaaggggcgcggcctggccaagaaccagacagattcg
gagcaatcagaccaggaacgggcgaagcggcagccgcacgatcccgaatactaccgaaat
atctggctgcagaagagcagcacgcccaagtttcgacagatgttggaatcgcgcatgcaa
ctgcctatgtggcagttccgccagcaggtcgttgacgcggtcgagagggaccaggtcgtc
atcatctgcggcgagacgggatgtggaaagagtacgcaggtgcctgcgttcctcctcgag
caccagttgctccagggcaagccgtgcaagatctactgcaccgagccgcggcgtatctcg
gccatatcgctggctcgccgtgtcagcgaggagctcggcgaaggaaagggagaccttgga
actagcagatccctcgtcggctactcaattcgcctcgagtccaacacggcacgggagacg
cgccttgtctacgccacaaccggtatcgtcatgcggatgctggagggttcgaacgacctg
gaggagataacccatctggtgcttgacgaagttcacgagcgctccatcgacagcgacttc
ctcctcgtcgtgctgaagaagctgctgacacggaggaaagacctcaaggtcgtgctgatg
tcggccaccgtcgatgcccagcgcttctccgagtatctcgacggcgcaccggtcttgacc
gttccgggacgaaccttccccgtccgcgttgcttacctggaggatgcagtcgagttgacc
gggtacacggtcgatcagcgcaaacaggagaagctgaccgagctggacgacgacgtggag
ctcgaggtggacacctcgtccaagccggagctgctgaaagagctgaggcagtattccgca
cggacgcgaaacacgcttgcgcaaatggacgagtaccgcatcgaattcgatctagtggtc
gaactgatatcgaagatcgcagtcgacccggagtatgaaccttacagcaaggccattctg
gtcttccttcccggtattgccgagatccggacactcaacgacatgctgctgggcgatcgc
ttcttcgccgacaactggcttgtgtacccgctgcattcgaccatcgccaccgaggagcag
gaggccgccttcctcatacctccgccgggcatgcgcaagatcgtgctggcgacgaatatt
gccgaaacgggtatcaccatcccggatgtgacatgcgtcatagacacgggcaagcaccga
gaaatgcgattcgacgagcgtcgccagttgtcacggctggtcgactcgttcatctcgcgt
gccaacgcgaagcagcgccgtggtcgtgcggggcgtgtccaggaagggctctgcttccac
ctcttcacgaaatatcgttacgacacctccatgaacgaccaacagacgccagagatgctg
cgcctgtcgctgcaagacttggccatccgggtcaagatctgcaagattggtggcatcgag
gagacgctgaggcaggcgctggaccctccgtcgccgaagaacatccgccgcgcaatcgac
gccctggtcgacgtccgagcgctcacggccacgaccgaggagctcacgccgctcggcgtc
cagcttgcgcgtctgccgcttgacgtgttcctgggcaagctcattctgctcggaaccgtt
ttcaagtgtctggatatggccatcaccgtggcagccatcctgtcgtccaagtctcctttc
gtggctccgtttggccagcgcaatcaggccgactccgtccgccggggcttccgcaagggc
gattccgatctcttgacggtctacaatgcgtactcggcctggaagcgcgtgtgccagtca
gcgacgggcggcggcgccgaattccagttctgccgcaagaacttcctctcgcagcaaacc
ctagccaacatagaggatctcaagggccagctcctcatcgcagttgccgactccggtttc
ctgcaactgaccgcggacgagcggcagacgcttagcaggctacgcttcagcgggcggcgg
cgccaccaggccttcttcgaggtgcccaagcgcgtcgacgtcaacagcgacaacgagctg
gtcgcacagtcggtcatcgcctggagcttctaccccaaactgctggtccgcgaccccggc
agcaagggcttccgccacgtgggcaccaaccagtccatcagcctgcacccgagcagcgtg
aacaaggggttcaccgacctgcggtggctgagctactaccacatcatgcaatccaaagca
ttctacaacgcgcacgagaccactgcggctgacccgttcgccatcgccctcctctgcggc
gacgcccgcgccgacctgcacgccggcgtgctcgtgctcgacggcaaccgcgcccgcttc
gccctgcccgactggaagtccgccctcgtcgtcaagaccctccgcgcccgcctgcgcgac
ttgctcacccgctgcttccgctacccgggccgcccgctcaccccgcagcacgagcgctgg
ctcgacgcctggcagcgcgtgttcgcgctcgcgcaggaggcgcgcgagagggcggctgct
gccgcggctgtgtcggcggcggcggctacggtgacggttgtggagggcgggacgtgggag
cgttag
DBGET
integrated database retrieval system
