Thermothielavioides terrestris: THITE_2118718
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Entry
THITE_2118718 CDS
T02228
Name
(RefSeq) SNF5-like protein
KO
K11648
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1
Organism
ttt
Thermothielavioides terrestris
Pathway
ttt03082
ATP-dependent chromatin remodeling
ttt03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
ttt00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
THITE_2118718
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
THITE_2118718
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
ttt01009
]
THITE_2118718
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ttt03021
]
THITE_2118718
03036 Chromosome and associated proteins [BR:
ttt03036
]
THITE_2118718
Protein phosphatases and associated proteins [BR:
ttt01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
THITE_2118718
Transcription machinery [BR:
ttt03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
THITE_2118718
SWI/SNF complex
THITE_2118718
Chromosome and associated proteins [BR:
ttt03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
THITE_2118718
PBAF complex
THITE_2118718
SWI/SNF complex
THITE_2118718
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF5
TH_ACT
Motif
Other DBs
NCBI-GeneID:
11522371
NCBI-ProteinID:
XP_003655247
JGI:
Thite2_2118718
UniProt:
G2RAN3
LinkDB
All DBs
Position
4:complement(join(1364447..1364779,1364936..1366867))
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AA seq
754 aa
AA seq
DB search
MAASQASAAGGDGGGLSSTAPPTSAPGVPSSSSSTSTSTASASAPAAAAAAAAATPSKSG
PPQADAASAIAVRDKDALNKVIVERFQTHDWIHSAALKEAQIRLEKDTKDMLARASDYRA
YRDYYASFPARLYGEGYRGYGNGYTENGGTTKIIYPSQKPRPGKRTTPPLKFSKKDMRKQ
AEQHEELVPVRIDVDWDRIKLRDTFTFNLHERLVSVEFFAAQLIEDMGLSPTLDKPVYDQ
VVQQMHEQLNDFYPFAYAEEDALDPELPYSAYKNDEMRILVKLNITIGAHTLVDQFEWDI
NNPMNSPEDFAASMARDLSLSGEFTTAIAHCIREQTQLFTRSLYSIGHPFDGRPIEDADL
VAAFLPSPLPSVFRPQQQAKDYAPYLYENTEAELERTETMFSREQRRQKRSINRRGGPQL
PDLKERQRTIRTSIVSSVLPGAAPSIEESRLFKRTVGSGLAGRGKLAARDGDLSDSEDSD
ESAPDSPAMSQLQGTARTRGMRGAASAAAQRMANLGRSETPEATIHHHETRTSRRFGREA
TREQTEEPLQQIVTLRVNPAKLRKLMRDLKMRHAPPPGATPTLAHQRAPSSVVPGSMGPP
ATPSSSSQPPPPKPSNTVSSLQGQLGRVPAPPPEPNGSAPNVPPPPPPEWLTAALAELLK
SYPSDSFEAIMRYCAINTETNAFVSLPLPPGEPVPPPNVQFAWLPRIRCRDCPGKSYTAG
PDMTVQNFEVHLKNRVHRERVAARLKKAQSGGQG
NT seq
2265 nt
NT seq
+upstream
nt +downstream
nt
atggccgcctcgcaggcgtcggccgctggcggcgacggcggcggattgtcatcaacggcg
cccccgacctctgctcccggcgttccatcctcatcctcatccacatccacatccaccgcc
tcggcctcggcgccggccgctgccgccgccgccgccgccgccacgccgtccaagtccggc
cctccccaggccgatgccgcctccgcaattgccgttcgcgacaaggacgctctcaacaaa
gtcatcgtcgagcgcttccagacgcacgattggatccattcagctgccctcaaagaggcc
cagatccgactcgaaaaggacaccaaggacatgctcgcgcgcgcgagcgactatcgcgca
tacagggactactacgccagcttcccggccaggctctacggtgagggctaccgcggttac
ggcaacggctacaccgagaatggcggcactaccaaaattatctatccgtcacagaagccg
cgccccggcaagcggacaacgccccccctgaagttcagcaagaaggacatgaggaagcag
gccgagcagcatgaggagctggtgcccgtccggatagacgtcgactgggacaggatcaag
ctgcgtgacacttttaccttcaacctccacgagcgcctcgtgtccgtcgagttctttgcc
gcccagctcatcgaggacatgggcctcagtccgacactcgacaagcccgtctacgaccag
gtggtacagcagatgcatgagcagctcaacgatttttaccccttcgcctacgccgaggaa
gacgcccttgaccccgagcttccgtattccgcttacaagaacgacgagatgcgcatcctc
gtcaaactcaacatcaccattggcgctcacaccctggtagatcagttcgagtgggatatc
aacaatccaatgaattcccccgaggatttcgccgccagcatggcccgcgatttatcgctc
tcgggcgagttcacaacagcgattgcccactgcatccgcgagcagacgcagcttttcact
cgcagtttgtacagcatcggccaccccttcgacggccgtccgattgaagacgccgatctt
gtggccgcattcctcccctcgcccttaccctccgtttttagaccccagcagcaagcgaaa
gattacgccccatacctttacgagaacacagaagccgagctggagaggaccgaaaccatg
ttttcgcgtgagcagaggaggcaaaagcggtccatcaaccgtcgcggaggtccccagctg
ccggacctcaaggagaggcagaggacaatccggacatcgatcgtctcctcagtactaccc
ggtgccgcccctagtatcgaagagagtcgcctgttcaagcggacagtaggcagtggcctt
gctgggaggggcaagctggctgcccgtgacggcgacttgtccgactcggaggatagcgac
gaatccgcccctgattctccggccatgtcacagctccaaggcaccgccaggaccaggggc
atgcgcggtgccgccagtgcagctgcccagcgcatggccaacctcgggcggtccgagaca
cctgaggctaccatacatcaccacgagacaaggacatcacgccgcttcggccgcgaagca
acccgggagcagaccgaggagccactacaacagatcgtcaccctcagagtgaaccccgcg
aaactaagaaagcttatgcgagacctcaagatgcgacacgcgccgccgcctggcgcaaca
cccactcttgcccaccaacgtgcccctagctccgtcgtcccgggctccatgggtcctccc
gccaccccatcctcatctagccaaccacccccgcccaaaccatcgaacaccgtctcgtct
cttcaaggccaacttggccgcgttccggcccctccacccgagccaaacggaagcgcgccc
aacgtgccgccgcccccgccgccggaatggctcaccgccgcgctcgccgagctgctcaag
tcgtacccgtccgactcgttcgaggccatcatgcgctactgcgccatcaacaccgagacc
aacgccttcgtctcgctgccgctgccccccggcgagcccgtgccgccgcccaacgtccag
ttcgcctggctgccgcgcatccgctgccgcgactgccccggcaagtcctacaccgccggg
cccgacatgacggtgcagaacttcgaggtccacctcaagaaccgcgtgcacagggagcgc
gtcgccgcgcggctgaagaaggcccagagcggcgggcagggttag
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