Thermothielavioides terrestris: THITE_2124524
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Entry
THITE_2124524 CDS
T02228
Name
(RefSeq) hypothetical protein
KO
K10754
replication factor C subunit 1
Organism
ttt
Thermothielavioides terrestris
Pathway
ttt03030
DNA replication
ttt03410
Base excision repair
ttt03420
Nucleotide excision repair
ttt03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
ttt00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
THITE_2124524
03410 Base excision repair
THITE_2124524
03420 Nucleotide excision repair
THITE_2124524
03430 Mismatch repair
THITE_2124524
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ttt03032
]
THITE_2124524
03400 DNA repair and recombination proteins [BR:
ttt03400
]
THITE_2124524
DNA replication proteins [BR:
ttt03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
THITE_2124524
DNA repair and recombination proteins [BR:
ttt03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
THITE_2124524
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RFC1
BRCT
AAA
Rad17
AAA_22
nSTAND3
DNA_pol3_delta
AAA_18
BRCT_2
AAA_16
AAA_28
AAA_33
AAA_14
RuvB_N
AAA_5
Motif
Other DBs
NCBI-GeneID:
11522284
NCBI-ProteinID:
XP_003658068
JGI:
Thite2_2124524
UniProt:
G2RFX8
LinkDB
All DBs
Position
6:join(2680764..2680863,2680924..2680972,2681026..2681067,2681128..2683779,2683836..2684169)
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AA seq
1058 aa
AA seq
DB search
MPDIRNFFSVKGGAPPPKPAPKKEAETAKKSRGKGRKVIEDSDDDDEVVEAKKPTRTTPR
KKAPAPTEVKGEETTAAKYFASSKPKSQTTQATPKSVTKTRQAPETELRLSPRSKPPASK
STGEPVQTAQNGTKKKPVTAYKQHDLDDDDAFLDDDEDAGDDIFAADVRGRGKRKNDDYV
EEESEDEILPKPKRVASRATSKPSKAEFDEEKTNTPRSTTQKGPIASRKRKSPASESEED
EGDEDVKPAKKVAKPRAPRAKKEPEPEPDDIRAILDNVPTVEAPDAPKQDPDAKFDWRKA
KAGGGNTGPPPMAGAAEIPEGEENCLLGKTFVFTGLLKTLSREEGQALVKRYGGKVTSAP
SSKTDFVVLGDDAGPSKLRKIKEHGIKTIDEEGLFYLIRTMPAYGGAGKGAEKAKQKQEA
EERKVREEAARMEKEEQARQAEAEKAAKAAAAARGAPAPVAVQAPSQLWTTKYAPTQLNQ
ICGNKSLVERIQAWLRNWPKSRKYNFQKRGADGMGGYRAIIISGPPGIGKTTAAHLAARL
EGYDVLESNASDTRSKKLVESGVGEVLNNTSLLGFFAGDGKKVDASKKKIVLVMDEVDGM
SAGDRGGVGALAKFCKKTDVPLILICNDRRLPKMKPFDHVAFDIRFQRPTVDQIRSRIMT
ICHREGLKLPVPVVNALIEGSGRDIRQIINMLSTAKLDQTTMDFDQSKAMTKAWEKHVIL
KPWDICQKMIAGGLFSPASKATLNDKIELYFNDHEFSFLMIQENYLRSKPAALSGKGYNP
QMQKLKHLELVDHAAESISDGDLVDRMIHGPQQHWSLMPTHAVFSTVRPSSFIAGVFTEQ
VMFTSWLGNNSKYGKLARFVREIHSHMRLKSSGDHNEIRQQYLPVLWHQLIKRLEVEGKD
AVEDVIELMDSYYLTRDDFDSIKELGVGPQSEDTVDIESQTKAAFTRIYNAASHPVPFMK
ASSVAAPRKVAKEMPDLEEAIEEEDENDVAEIPDVDEDEELDLKTDKYIKQPKAKAAKKT
SKKAAKADDDDEEDEETGKTSKAKGKGATRGGGRPKKA
NT seq
3177 nt
NT seq
+upstream
nt +downstream
nt
atgcctgatattcggaacttcttcagtgtcaaaggcggtgcgccgcccccgaagcctgcg
cccaagaaggaagctgagacggcgaaaaagtctcgaggcaaagggcgcaaggtcatcgag
gacagcgacgacgacgacgaggttgttgaagccaagaagccaaccaggacgactccgagg
aaaaaggcgcctgcgcctaccgaggtaaaaggggaagaaaccactgccgcaaaatacttc
gcgtcgtccaagccgaagtcgcaaaccacccaagcaacgcccaagtctgtgacgaaaacc
cgccaagcccctgagaccgaactccgtctgagtcccaggtcgaagcctcctgcgtcgaaa
tcaaccggggagcccgtccagactgcacaaaatggcaccaagaagaaacccgtcaccgcc
tacaagcagcacgacctagacgatgacgacgcatttctggacgacgatgaagatgccggg
gatgacatctttgcggcggatgtgcggggacgcggcaagagaaagaacgacgattacgtc
gaagaagagagcgaggatgagatactgccaaagcctaaacgagtggcttcccgcgcaact
agcaagccctccaaagccgaattcgacgaggagaagacgaacactcccaggagcaccacc
cagaaagggccgatcgcgagcagaaaacgcaaatcaccagcttccgagagcgaggaggac
gagggcgacgaggatgtgaagcccgccaagaaggttgcgaagccccgggccccgagggcc
aagaaggagcccgaacccgagccagacgatatccgggcaattctcgacaacgtgcccacg
gttgaggcgcccgacgcgccaaaacaagatcctgatgccaagtttgactggcgcaaggca
aaggctggcggcggcaacaccgggccacctcccatggccggtgctgccgagatccctgaa
ggcgaggagaactgcttgttgggcaaaacattcgtctttacaggtctcctcaagaccctc
agccgggaggaaggccaagcgctggtcaaacgctatgggggcaaggtcaccagcgctccg
agcagcaagacggatttcgtcgtccttggtgatgatgcgggccctagtaagctgcgaaag
ataaaggaacacggcatcaagaccatcgacgaggagggcctattttacctcatcaggacc
atgcccgcttacggtggcgctggtaagggggccgagaaagcgaagcagaagcaagaagcg
gaagagagaaaggtgcgcgaggaagcagcccgcatggagaaagaggaacaagcccgccag
gcggaagccgagaaggcggccaaagctgctgccgctgcccgcggggcgccggctcctgtt
gctgttcaggcaccctcccagctctggacgacgaagtatgctcccacccaactcaatcag
atctgcggcaacaagtccctcgtggagaggatccaggcttggctccgcaactggcccaaa
tcacgcaaatacaacttccagaagaggggtgcggatggcatgggcggataccgtgcgatt
atcatctccgggccacctggtatcggtaagacgacggcagcccaccttgcggccaggctg
gaaggatacgatgttcttgagagcaacgccagtgatacacgcagtaagaagctcgtcgag
agcggggtcggcgaggtgctcaacaacacttcgttgctcggcttcttcgcgggggacggc
aagaaggtcgacgcctccaaaaagaagatcgtcctcgtcatggacgaagttgatggcatg
tcggcaggtgaccgaggcggcgtcggggcgcttgccaagttctgcaagaagacggatgtt
ccgctcatcctgatctgcaacgaccgcaggctgcccaagatgaagcctttcgaccacgtc
gccttcgacatcaggttccagcgcccaaccgtcgaccagatcaggtccaggatcatgaca
atctgccacagagaaggcttgaagttgccggtgccggttgtgaacgcactgatcgaaggc
agcggcagggacatccgccagatcatcaacatgctgtctacggccaagctcgaccagaca
accatggatttcgatcaaagcaaggcgatgaccaaggcttgggagaagcacgtcatcttg
aagccgtgggacatctgccagaagatgatcgcgggcggcttgttcagcccggcgagcaag
gcgacactgaacgacaagatcgagctctacttcaacgatcatgaattcagcttcctgatg
attcaagaaaattacctacggtcgaaaccggcggcgctaagcggcaagggctacaaccct
cagatgcagaagctcaagcacctcgagttggttgaccatgcagccgaaagcatcagcgac
ggagacctggttgaccgcatgatccacggccctcagcaacactggagcttgatgccgact
cacgccgtcttcagcactgtgaggccgtcgagcttcatcgccggcgtgttcacagaacag
gtcatgttcacatcatggctcggcaacaacagcaaatacgggaagcttgcccgatttgtg
cgcgagatccattcgcacatgcgtctcaagtcatccggcgaccacaacgaaatccggcag
cagtatctgcctgtgctctggcaccaactgatcaagcggctggaggttgagggcaaggat
gccgtggaggacgtcatcgagctgatggacagctattacctgacgcgggatgacttcgat
tcgatcaaggaacttggcgtgggacctcagtcagaggacacagtcgacatcgagagccag
accaaggcggccttcacgaggatatacaacgccgcgtcgcatcccgtgcccttcatgaag
gccagcagcgtagcggcgccaaggaaggttgccaaggaaatgcctgacctcgaagaagcc
atcgaggaagaggacgagaatgatgtcgccgagattcccgatgtcgacgaggacgaggag
ctcgacctcaagacggacaagtacatcaagcagccgaaggcaaaggctgccaagaagacg
tccaagaaagcagccaaggccgatgatgacgacgaggaggacgaggagactggcaagacg
tccaaggccaaaggcaaaggggccacccggggcgggggacggccgaaaaaggcgtag
DBGET
integrated database retrieval system
