KEGG   Tumebacillus avium: CBW65_19490Help
Entry
CBW65_19490       CDS       T04874                                 

Definition
(GenBank) hypothetical protein
  KO
K01971  bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
Organism
tum  Tumebacillus avium
Pathway
tum03450  Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:tum00001]
 Genetic Information Processing
  Replication and repair
   03450 Non-homologous end-joining
    CBW65_19490
Enzymes [BR:tum01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     CBW65_19490
DNA repair and recombination proteins [BR:tum03400]
 Prokaryotic Type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    Two-component NHEJ DNA repair complex
     CBW65_19490
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif
Pfam: DNA_ligase_A_M DNA_ligase_A_C RNA_ligase mRNA_cap_enzyme
Motif
Other DBs
NCBI-ProteinID: ARU62919
UniProt: A0A1Y0ISD0
LinkDB All DBs
Position
complement(4202040..4202990)
Genome map
AA seq 316 aa AA seqDB search
MITPKPFDPMALVMVDEPFDDPNHIAQIKWDGVRMLAYLDETGLSLFNRRKNERTANYPE
LQELKTQVKARSLILDGEIVALGEGGKPSFSNILRRDLAKSSDKIRLMARQLPIYYMVFD
ILYLDDRWLVDEPLTTRQERLAEVVPPSAQVQLVESHATGVQLFRVMQEQGMEGIVIKEK
AGRYHIGDRHPTWKKVKYFRKLNAVVGGATLRGGNVNSLLLGLYHEGQLIYIGKAGSGLN
NDSIAALTAFARGLPKQGHPFAAKPKLPASTAYDEIVFFPPQLVVEVQFMEWTTDMTLRA
PTIQGFRERDPEECVL
NT seq 951 nt NT seq  +upstreamnt  +downstreamnt
atgatcacgccgaagcccttcgatccgatggcgctggtcatggtcgacgagccgtttgac
gacccgaaccacatcgcccagatcaaatgggacggggtgcgcatgctggcctatctcgac
gagacggggctgtcgctttttaaccgccgcaaaaacgagcgcaccgcgaactacccggaa
ctgcaggagctgaaaacgcaggtcaaggcgcgctcgctgatcctcgacggcgagatcgtg
gcgctgggcgaggggggcaaaccgtctttttcaaacatcctgcgccgcgacctcgccaag
agcagtgacaagatccgcctgatggcccgccaactgccgatctattacatggtgttcgac
atcctgtacctcgatgaccgctggctggtcgacgagccgctcacgacccgtcaggagcgt
ttggcggaggtcgtgccaccttcggcacaggtacagctggtcgaaagccatgcaacgggc
gtgcaactgtttcgagtgatgcaggagcaggggatggaagggatcgtgatcaaggaaaaa
gcgggccgctaccacatcggcgatcgccacccgacgtggaaaaaggtcaagtatttccgc
aagctgaacgcggttgtcggcggggcgactttacgcgggggcaacgtcaattcgctcctg
cttgggctgtaccatgaaggacagctgatctacatcggcaaagcaggctccggcctgaac
aacgactcgatcgccgccctgaccgcttttgcccgcggactgcccaagcaggggcacccc
ttcgccgcaaaaccgaaactgcctgcctcgaccgcgtacgacgagatcgtcttcttcccc
ccgcaactggtggtcgaggtgcagttcatggagtggaccaccgacatgaccctgcgcgcc
ccgaccatccaaggcttccgcgagcgggacccggaggagtgtgtgttatga

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