KEGG   Trichophyton verrucosum: TRV_03173Help
Entry
TRV_03173         CDS       T01615                                 

Definition
(RefSeq) hypothetical protein
  KO
K10777  
DNA ligase 4 [EC:6.5.1.1]
Organism
tve  Trichophyton verrucosum
Pathway
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:tve00001]
 Genetic Information Processing
  Replication and repair
   03450 Non-homologous end-joining
    TRV_03173
Enzymes [BR:tve01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     TRV_03173
DNA repair and recombination proteins [BR:tve03400]
 Eukaryotic Type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    DNA Ligase 4 complex
     TRV_03173
BRITE hierarchy
SSDB OrthologParalogGFIT
Motif Motif
Other DBs
NCBI-GeneID: 
NCBI-ProteinID: 
UniProt: 
LinkDB All DBs
AA seq 1012 aa AA seqDB search
MEPNPGGAIRETERELDEKPRNHGQTLPFHDLFISLFNPLNDLKKKPAGPPAARRKAGPT
GRNNLSPHELRRNVIERFISRWRQQVGNDFFPAFRLIVPEKDRDRAMYGLKEKAIGKLLV
KVMKIDKNSEDGYNLLNWKLPGQRAATAMTGDFAGRCFEVISKRPLRTEVGDMSIADVNS
RLDDLAVASKEDAQLPILDEFYRRMNPEEMMWLIRIILRQMKVGATERTFFEIWHPDAES
LFNISSSLRRVCWELYLPSIRLEADEARVTLMQCFQPQLAQFQMHSFQKIIERMRLAEDD
PEFWIEEKLDGERMQLHMETNSSIPGGKRFEFWSRKAKEYTYLYGNGFYDDNGSLTRHLK
NAFADGVESIILDGEMITWDPEQDAPVPFGTLKTAALAEQRNPFSASGHRPLFRIFDIVY
LNGKPLTRYTLRDRRRALEASVIPVHRRFEIHPYEVGKSASDIEPLLRKVVAEASEGLVL
KNPNSPYRLNERNDDWMKVKPDYMTEFGESLDCIVVGGYYGSGKRGGNISSYLCGLRVDD
THAEDGTNPMKCYSFCKVGGGFTAADYANIRHHTDGKWHDWNPKKPPTEYIELAGGDAQH
ERPDVWIKPDDSVVVCVKAAAVTPSDQFRLGLTVRFPRFKRLRMDKDWQSALSVQEFIDL
KAGAEQEKKEKDFQVDNSRRKKTKRSKKKELTVVGSGEPNVAYVGSKTHIFDGLSFCGLK
IQALEVNYADIPIVVMTESVKPMKKSKADLEQLIKANGGKIYQTNNAAKDTYCIADRRTV
KVASLQKSGLENVIRPCWISDCISQNEHDTGESSILLPLEPRHMFFTKEDQKEEISNNVD
KYDDSFARDTNIAELTEILHKMDVISDISGEERLDIMSDLTLDGDQGWLFKNLTIFFAPC
GHLSSVPGEPCVDGLSIRQQLARNITTFTGATVTDQQKNNRITHVIVDPSEDRDLETGKT
KNYTTLRSEFATRRTIPHFVTVQWVEECWKEKTLVDEERTYSMLAIALPGLC
NT seq 3039 nt NT seq  +upstreamnt  +downstreamnt
atggagccgaacccaggtggtgccattagggagacggagagggaacttgacgagaaacca
cgtaaccacggacaaacccttccctttcatgatttgttcatatcactctttaaccctctc
aacgatctcaaaaagaagcctgcaggaccccccgcggctcgaaggaaggcagggcctact
gggcgtaacaacctctcaccacatgagttgcgtcgtaatgtgattgaacgcttcatctcg
cgatggcgacaacaagtcggtaatgactttttcccagcattccggcttattgtccccgag
aaagatcgtgatcgtgccatgtatggattaaaagaaaaggccattggcaaattgctagtc
aaagtcatgaagattgacaaaaattctgaagatggctacaatcttctaaactggaaactt
ccaggccaaagggctgcaaccgcaatgacaggtgattttgccggtcgctgcttcgaagtc
atctccaagaggcccttgagaacggaggtgggtgatatgtctatagctgatgttaactcc
cggcttgatgatttggctgtcgcttctaaggaggacgcgcagctacccatcctagatgaa
ttttatcggcggatgaacccggaagagatgatgtggttgatcagaattattttacggcaa
atgaaagttggtgctaccgagcgtacattcttcgaaatatggcatccagatgcggaaagt
cttttcaatatttctagtagtcttcgccgagtatgctgggagttatacctaccaagtatt
cgccttgaggcggatgaagctcgtgtcactctaatgcaatgcttccagccgcagctggct
caatttcaaatgcactcctttcaaaagataattgaaaggatgaggttggctgaagatgat
cctgaattttggattgaagagaagctcgacggcgagcgcatgcagcttcatatggagacg
aacagctctatacccggcggaaagaggtttgaattttggtcaagaaaagctaaagaatac
acgtatctatatggaaatggtttctatgatgataatggatctctaacgagacatttgaaa
aatgcttttgctgatggagttgaaagtattatccttgatggagagatgattacctgggat
ccagaacaagacgcccccgtaccatttggtacgcttaagacggcggccttagcagagcaa
cgaaatccattttctgcaagtggccatcggcccctattcaggatatttgatatcgtttac
ctcaatggtaaacccctaacgagatatacacttcgggacaggcgtcgagcgctagaagcg
agtgtgattccggttcaccggcgttttgagattcacccctatgaagttggcaaaagtgcg
agtgatattgaacctctacttcggaaagtagtagcagaggcgtccgagggacttgtcttg
aagaacccgaactcaccatatcgcctcaacgaacgcaatgatgactggatgaaggtgaag
ccagattacatgactgaatttggagaatcgctggattgtattgtagtgggcggctattat
ggctctggcaaaagaggcggaaatatatcaagttacctctgcggcctgagggttgacgat
acgcatgccgaggacgggactaatccgatgaagtgctattccttctgtaaagttggaggg
ggatttacagcagcagattatgcaaacattcgtcaccataccgatggcaaatggcatgac
tggaatccaaaaaagccgcctactgaatatatagaacttgcaggtggtgatgcacaacat
gaacgacctgatgtctggatcaaacccgatgattcagttgttgtatgcgtcaaggctgca
gctgttacacctagtgatcaatttcgactgggactaacagttcgattccctcggtttaaa
cggctaaggatggacaaggactggcagagtgcgttgtccgtccaggaatttatagaccta
aaggccggggctgagcaggagaagaaagaaaaggactttcaagtggataactcccgcagg
aagaagaccaaaaggagtaagaagaaagaactcactgttgtcggctccggcgagccaaat
gttgcctatgttgggagcaaaactcatatttttgatgggctttcgttctgtgggttaaaa
atacaggctcttgaggtgaattatgctgatattcctatagttgtcatgaccgagtccgtg
aagccaatgaagaaatccaaagctgacctggaacagctgatcaaggcaaacggaggaaag
atataccaaacaaataacgcagcaaaggacacctattgtatcgcagacagaagaaccgta
aaggtggcatcattgcaaaaatctggccttgagaatgtcattcgaccttgctggatttct
gactgtatcagccaaaacgaacacgatactggggaaagcagcattttgcttcctctagag
ccacgacatatgttcttcactaaagaagatcaaaaggaggaaatcagcaataatgtcgac
aaatatgacgacagctttgccagagacaccaatatagcggaacttacagagatactacac
aagatggatgtgatatcagatatatctggagaagaacgactagacatcatgtctgatctt
actctagatggagatcaagggtggcttttcaaaaatctgacaatattctttgccccctgc
ggccatctgtccagtgtccccggagagccctgtgtcgatgggttgtcgatacgtcagcaa
ttggctcgaaacatcaccacttttacgggagccacagtgacggaccagcagaagaacaat
cggatcacccacgttattgttgatccctcggaggatagggatctggagactggcaaaacc
aaaaactatactactctgaggtcagagtttgcaacccgccgcaccattcctcatttcgtg
actgttcagtgggttgaagaatgttggaaagaaaagacactggttgatgaagagcgtacg
tattccatgctagccattgctctgccagggctctgctaa

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