Thiocystis violascens: Thivi_3904
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Entry
Thivi_3904 CDS
T02138
Name
(GenBank) putative transcriptional regulator with HTH domain
KO
K03655
ATP-dependent DNA helicase RecG [EC:
5.6.2.4
]
Organism
tvi
Thiocystis violascens
Pathway
tvi03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
tvi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
Thivi_3904
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tvi03400
]
Thivi_3904
Enzymes [BR:
tvi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Thivi_3904
DNA repair and recombination proteins [BR:
tvi03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
Thivi_3904
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HATPase_c_4
SLFN_AlbA_2
DUF4423
Motif
Other DBs
NCBI-ProteinID:
AFL75742
UniProt:
I3YFH4
LinkDB
All DBs
Position
complement(4250560..4252209)
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AA seq
549 aa
AA seq
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MTLEDQHTDRKSLRTVTGKNPHWDEIAKDCVCFANSQGGRLLIGIEDNETEPPAGQGIPP
ELIDRLRKRIGELTVNVQALPGVQRAANGGEFIELLIDRSPSVASTTDGRYFLRVGDSCR
PILGDDVLRLANERPGRSWESMEAGVVCAATDPAKLAGFVQAIRDSDRVKDSVKEKGPDE
LLTHYGLAQGATLTRLGVLLLGTMTDRRALGTAPLVQAIKYDMLGQKINKWVWDDCAFSP
VELLDAVWQEIPDFRESYEVPEGMFRSSVPAYDEKVVRELLVNALVHRPYTQQGDIYLNL
HPDRLEVVNPGRLPLGVTPRNILHASRRRNDALARVFHDLKLMEREGSGFDLMYDRLLSQ
GRPAPLIEEGADWVKVTIQRRILKPEVIRLMAAADARFQLTQRERITLGALAQTEGMPAR
ALANMLETETLEPLALWLGRLLEWGLVHTTGKTSGTRYFVAPEWLRQANLDDRTTLTRIT
PHRLTALILEDLGRYPDSSTPEINRRIGTEISAKTVKRALDGLAATGQVTYRGEKRWRRY
RLADSSPAA
NT seq
1650 nt
NT seq
+upstream
nt +downstream
nt
atgacgctggaagaccagcacaccgaccgcaagtcgctgcgcaccgtcaccggcaagaac
ccgcattgggacgagatagccaaggactgcgtctgcttcgccaatagccaaggcggtcga
ctcttgatcgggatcgaggataacgagacagagccgcctgccggacaagggattccaccg
gaactgatcgatcggctgcgcaaacggatcggcgagctgacggtgaacgtccaggcgttg
cccggcgtgcagcgggccgcgaacggtggcgaattcatcgagttgctgatcgaccgctcg
ccgagcgtcgcctcgaccacggatgggcgctacttcctgcgggtgggcgatagctgccga
ccgatcctgggggatgacgtgctgcgcttggccaacgagcggccaggccgctcctgggag
tcgatggaggccggtgtcgtgtgtgccgcgacggatcctgccaagctcgccggtttcgtg
caggcgatccgcgactccgaccgggtcaaggactcggtgaaggaaaaaggaccggatgag
ctgctgacccattacgggcttgcccaaggggcaacgctgacgcggcttggtgttctgttg
ctcggcaccatgaccgatcggcgggccctgggcaccgcgcccttggtgcaggcgatcaag
tacgacatgctggggcagaagatcaacaagtgggtgtgggacgattgtgccttttcgccg
gtagaactgctggatgccgtctggcaagagatccccgactttcgcgaaagctatgaagtc
ccggaggggatgtttcgatccagcgtgccggcctacgacgaaaaggtggtgcgcgagcta
ttggtcaacgcactggtgcaccggccctacacgcagcagggcgacatctatttgaatctg
catccggatcgcctggaggtggtcaaccccggccggctgcccctgggggtcaccccacgc
aacatcctgcacgccagccgccgccgcaacgacgcgctggcgcgggtctttcacgacttg
aagctgatggagcgcgagggcagcggtttcgatctcatgtacgaccggctgttgtctcag
ggccgaccggcgccgctgatcgaggaaggcgcggattgggtcaaggtgaccatccagcgg
cgtatcctcaagccggaggtcatccggttaatggccgcagccgatgcgcgttttcagttg
actcagcgtgagcgcatcaccctcggcgccctggcgcaaaccgaaggcatgccggcgcgc
gcgctggccaacatgctggagacggagacccttgaacccctggcgctctggctggggcga
ctcctcgaatggggcctggtgcacacgaccggaaagacctctgggacgcgctacttcgtt
gcgccggagtggttacgccaggcaaatctcgacgatagaaccaccttgacgcggattaca
ccgcatcggttgacggcgctgatcctggaggacttggggcgctaccccgactcgtccacc
ccggagatcaaccgtcggatcggtacggagatttccgccaagaccgtcaagcgcgcgctg
gatggattggcggcaacgggccaggtgacctatcggggagaaaagcgctggcgccggtat
cgactggctgactcgtcgccggcagcctaa
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