Tropheryma whipplei Twist: TWT_381
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Entry
TWT_381 CDS
T00116
Symbol
holA
Name
(GenBank) DNA polymerase III delta subunit
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
twh
Tropheryma whipplei Twist
Pathway
twh03030
DNA replication
twh03430
Mismatch repair
twh03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
twh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
TWT_381 (holA)
03430 Mismatch repair
TWT_381 (holA)
03440 Homologous recombination
TWT_381 (holA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
twh03032
]
TWT_381 (holA)
03400 DNA repair and recombination proteins [BR:
twh03400
]
TWT_381 (holA)
Enzymes [BR:
twh01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
TWT_381 (holA)
DNA replication proteins [BR:
twh03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
TWT_381 (holA)
DNA repair and recombination proteins [BR:
twh03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
TWT_381 (holA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta_C
DNA_pol3_delta
Motif
Other DBs
NCBI-ProteinID:
AAO44478
UniProt:
Q83MW5
LinkDB
All DBs
Position
complement(468899..469828)
Genome browser
AA seq
309 aa
AA seq
DB search
MSIDPLVLLSGKCEYSANEAIASIRKKITDSLSAPEVHVIYADNYSAGELHRLASPSLLF
SPRLVIVKQVEECNDIFLDEAMSYIQDPFKDTCVVFRHKSGIRGKRLLGELRNIGVEIAC
PDLTPSRFVSDFFKKEKRNITQAAINLLVESFDDIPELAQFCKQIISDTKGTISAKGTIS
ECEIAFLCWSRPGASVFRVVDAAMNGDEAATVLLLSRLLTEGGSAIPLVAAASARLRLLV
KVKYGKKVTAAPWQIALAKKQLAPWTNSSFMSCILALHAADRALKSTAGNPNYLVEHAMR
LIARSARLD
NT seq
930 nt
NT seq
+upstream
nt +downstream
nt
atgagtattgaccctcttgttttgttatcaggtaaatgcgagtactcggccaatgaggct
attgctagcataaggaaaaagataacagattccctgtcagcgcccgaggttcatgtaatc
tatgcggacaattattccgcgggcgagttgcaccgattggcatcaccttctttgttgttt
tctccaagacttgtaatcgtaaaacaagtcgaggagtgtaacgatattttccttgatgaa
gctatgtcctacatacaagatccttttaaggatacgtgtgttgtgtttaggcacaagtct
ggtattcggggcaaaaggctgctcggagagctaagaaatataggcgtagagattgcctgc
cctgatctcaccccgtcacgttttgtatctgattttttcaagaaggagaagcgtaacata
acccaagctgctattaacctgctcgtagaatcttttgatgacataccggagctggctcag
ttttgtaaacagattatttccgataccaaaggcaccatctcggccaaaggcaccatctcg
gaatgtgaaattgctttcctttgctggtctaggcctggtgcatcagtcttccgggtggtc
gatgcggccatgaatggcgacgaagctgctactgtactgcttctcagtcgactccttaca
gagggtggtagtgcgattccccttgttgccgccgcaagcgcaagactcagacttcttgtt
aaagtgaagtatggcaagaaggttactgccgcaccctggcagattgcacttgctaaaaag
cagttagcaccctggacgaacagtagcttcatgagctgtattctagctcttcatgcggca
gatcgtgccctgaaaagcacggcggggaatccaaactatttggtggagcatgccatgcgg
cttatcgcaagaagtgcccgtctggactga
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