Thermoanaerobacterium xylanolyticum: Thexy_1244
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Entry
Thexy_1244 CDS
T01505
Name
(GenBank) DNA mismatch repair protein mutS
KO
K03555
DNA mismatch repair protein MutS
Organism
txy
Thermoanaerobacterium xylanolyticum
Pathway
txy03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
txy00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
Thexy_1244
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
txy03400
]
Thexy_1244
DNA repair and recombination proteins [BR:
txy03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
Thexy_1244
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_I
MutS_IV
MutS_II
AAA_14
AAA_29
AAA_23
AAA_27
BACK
Motif
Other DBs
NCBI-ProteinID:
AEF17277
UniProt:
F6BLN0
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Position
1303668..1306241
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AA seq
857 aa
AA seq
DB search
MPYTPMMEQYLKIKEKYKDSILFFRIGDFYEMFFDDAVIASKELEIVLTGKDCGQEERAP
MAGVPFHAADFYIDKLVKKGYKVAICEQLEDPAYAKGLVERDVIRVFTPGTVINTNSLEE
KSNNYLLSIFKEGDGYGLSFVDVLTGELFVTQITKCNDIRKIYDEIMRYSPSEIIANNDF
FELKRLVKILNSSKVFINKYDKVLNNAEDIIITQFNRSLKDLKLERKKYAIKSLASVLLY
LKEMQKVELKQLNNLTYYEDNSFMLLDNNTIRNLEIVYSINRDHSKSGTLLSVLDQTVTP
MGGRLLKRWLEEPLIDVEKINYRLNSVSELYNDYKGRLDIRDILKGIYDLERLSSKLVYQ
NINAKDLLSIKISIERLPKLKQLLDKYKSNYLKEIFSKLDTLQDIHDLIDKSIKDDPSSN
VKEGNIIKDGFDKNIDELRRASIDGKSWIANLESYEKEKTGIKTLKIGYNKVFGYYIEVS
KSYISSVPENYIRKQTLANAERYITPELKEIEEKILGAETKLVEMEYEIFDRIREQIKNE
IYRIQMTSRYIAILDVLVSLATVAETNNYVKPIVNSSDRIVIKDGRHPVIETIMDDSFIS
NDIEIDDKKPIMIITGPNMAGKSTYMRQVALIVLMAQIGSFVPASYAEIGVVDRIFTRVG
ASDDLFSGQSTFMVEMNEVSLILNSATKNSLIILDEVGRGTSTYDGMSIACAILEYIHDK
IKAKTMFATHYHELTNLEDKLDGIKNYNISVEETDDEIIFLRKIIPGAADKSYGIQVAKL
AGLPDEVIQNAKKILNNLENSDLEVATTFMPTQIDIFSLEKETLIEEIVDLDIENITPIQ
ALNYLYDLKKKALSLRM
NT seq
2574 nt
NT seq
+upstream
nt +downstream
nt
atgccgtatactcctatgatggaacaatatttaaaaataaaagagaagtacaaagattcg
attttattttttcgaatcggtgatttttatgaaatgttttttgatgatgcagtaattgcg
tcgaaagagttggaaatagttttgacaggcaaagattgtggacaagaagaaagagcacca
atggctggagtgccatttcatgccgcagatttttatatagataaattagtcaaaaaagga
tataaagtagcgatttgtgaacagttagaggatcctgcttatgctaaaggattggtagaa
agagatgtcatacgagtttttactccaggtactgtaataaacacaaattcattagaggaa
aaaagcaataattaccttttatctatatttaaagaaggagacggctatggattgtctttt
gttgatgtgttgacaggagaattatttgtgacacaaattacaaagtgtaacgatataaga
aaaatatacgacgaaataatgagatacagtccttctgaaataatagccaataatgatttt
tttgaattaaaaagattagtgaaaattttaaattcaagtaaagtttttataaacaaatat
gataaagtattaaataatgcagaagatataataataactcaatttaacagatcactgaaa
gatttaaaattagagaggaaaaaatatgcaataaaatctttagcatctgttcttttgtac
ttaaaagaaatgcagaaggttgaattaaaacaattaaacaatttaacttattatgaagat
aattctttcatgttgcttgataataacacaataagaaacttggaaatcgtatattcaata
aatagagatcattcaaaaagtgggactttactcagtgtattagatcaaactgttacacct
atggggggaagattacttaaaagatggttagaagaacctttaatagatgtagaaaaaatc
aattatcgattgaattctgtttcggaattatacaatgattataaagggcgattggatatt
agagatattttaaaggggatttatgatttagaaaggctttccagcaaattagtttatcaa
aatataaatgcaaaagatcttttgtctataaagatctcaattgaaaggcttcctaagtta
aaacaattgcttgataagtacaagtctaattatttaaaagagatatttagtaagttagat
acattacaagatatacatgatttaatcgataaatcaataaaagatgatccatcttctaat
gttaaggaaggaaatatcataaaagatggatttgataaaaatattgatgaattaagaaga
gcatcgatagatggtaaatcatggatagcaaaccttgaatcatatgagaaagaaaaaacc
ggcataaaaacattaaaaattggttataataaagtatttggttactatattgaagtgtca
aaatcatatatatcatctgttcctgaaaattatattagaaagcagacacttgctaatgct
gagaggtatattactccagaacttaaagaaatagaagaaaaaattctcggtgcagaaaca
aagcttgtagagatggagtatgaaatttttgaccgtataagagaacagataaaaaatgag
atataccgaatacagatgacgtccagatatatagcaattttagatgttctcgtttctctg
gcgacggtggcagaaacaaataattatgttaagcctattgtaaatagcagtgacagaatt
gtgataaaagatggaagacacccagtcattgaaacgattatggatgactcttttatatca
aatgatatcgaaattgatgataaaaagcctatcatgattataacagggccaaatatggca
ggaaaatctacttacatgcgtcaagttgcattgattgtcttgatggctcaaattggtagt
tttgttccagcatcatatgctgaaataggcgttgtcgataggatttttacaagagtaggt
gcatctgacgatttattttctgggcaaagtacttttatggtggaaatgaatgaagtatca
ctaatattaaattctgccacgaaaaacagtttaattatacttgatgaagttggacgtggc
acaagcacttatgatggtatgagcatagcatgtgctattcttgaatacattcatgataaa
ataaaggcaaaaacgatgtttgcaacacattatcatgaattgactaatttagaagacaag
ctagatggaattaaaaattataatatctcagttgaagagacggatgatgaaataattttt
ttgcgaaagataatacctggtgcggcagataaaagctatggcattcaggttgcaaaatta
gctggactgccggatgaagtcattcaaaatgcgaaaaaaatattgaataatttagagaat
agcgacttagaagtggccactacatttatgcctactcagattgatatattcagcttagaa
aaagaaacgttgatagaagaaatagttgacttagatatagaaaatattacgcctatacaa
gctttaaattatttatacgatttaaagaaaaaagccctttcattaaggatgtga
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