Thermoanaerobacterium xylanolyticum: Thexy_1283
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Entry
Thexy_1283 CDS
T01505
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
txy
Thermoanaerobacterium xylanolyticum
Brite
KEGG Orthology (KO) [BR:
txy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
txy03016
]
Thexy_1283
Enzymes [BR:
txy01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
Thexy_1283
Transfer RNA biogenesis [BR:
txy03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
Thexy_1283
Prokaryotic type
Thexy_1283
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
ZirS_C
Motif
Other DBs
NCBI-ProteinID:
AEF17316
UniProt:
F6BFH7
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All DBs
Position
complement(1347315..1348184)
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AA seq
289 aa
AA seq
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MDGFLNILKPPGMTSHDVVSFLRKNFNIKKVGHLGTLDPGAAGVLPLCIGKATKLAQFVM
TQTKTYRAEITFGFSTDSIDKFGNITSVMPVKILEQHKISEIESVFKGNVLQIPPIYSAK
KVDGKKLYQYAREGKTIDIKPSFVTIYDINVISYEAPYKIMFDVKCSKGTYVRALVRDIC
DYLNISGYMSMLIRSSVGSFTLENSFTLEEVVSGKYKIMKIDDIITFPGVCLGNDDYRKI
VHGNPVKNKYIDANDELIKLYSPEHFFVGVGKVVGDRIYVERLLFGADG
NT seq
870 nt
NT seq
+upstream
nt +downstream
nt
atggatggttttttaaatattttgaaaccgccaggtatgacatctcatgatgtagtatcc
tttttaaggaaaaattttaatataaaaaaagtaggccatttaggaacccttgatccggga
gcagcaggtgtattacctttatgtataggcaaagcgacgaaattggcccagtttgtaatg
acgcaaacaaagacatatagagcagaaataacttttggtttttctacagatagcattgat
aaatttggaaatattacgagtgtaatgcctgttaaaattttggaacagcataaaatatca
gaaattgaaagtgtatttaaaggcaatgttttacagataccacctatttactctgctaaa
aaagttgatgggaaaaaactttatcaatatgcacgagaaggtaaaactattgatatcaag
ccttcttttgtgactatatatgacattaatgtgatatcttacgaagcaccgtacaaaatt
atgtttgacgtaaaatgttcaaaaggaacatatgtaagagctcttgttcgtgatatttgt
gattatctgaatatttcaggatatatgtcaatgcttattagatcaagtgttggatcattt
actttagaaaattcatttacattagaagaagttgtaagtggaaagtataaaataatgaaa
atagatgatattataacatttcctggtgtctgtcttggcaatgatgattatcgtaagatt
gtgcacggcaatcctgtgaaaaataaatacatagatgcaaatgatgaattaataaagtta
tatagtccagaacatttctttgttggcgttggcaaagttgtaggtgatagaatctatgtt
gaacgattgttatttggagctgatggctaa
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