Variovorax sp. PAMC 28711: AX767_06235
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Entry
AX767_06235 CDS
T04325
Name
(GenBank) lytic transglycosylase
KO
K08309
peptidoglycan lytic transglycosylase [EC:
4.2.2.29
]
Organism
vaa
Variovorax sp. PAMC 28711
Brite
KEGG Orthology (KO) [BR:
vaa00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
vaa01011
]
AX767_06235
Enzymes [BR:
vaa01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.29 peptidoglycan lytic transglycosylase
AX767_06235
Peptidoglycan biosynthesis and degradation proteins [BR:
vaa01011
]
Peptidoglycan biosynthesis and degradation
Lytic transglycosylase
AX767_06235
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SLT
IPT
Motif
Other DBs
NCBI-ProteinID:
AMM23991
UniProt:
A0A126ZC36
LinkDB
All DBs
Position
1232355..1234328
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AA seq
657 aa
AA seq
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MKFRSILAPLVLSATAFTQPTLAQTGGDDVVVQMKQAFQRGDKGRLTALLPQARGSTLEP
WAAYWELKARLQEASPAEVQDFLARYAGTYQEDRLRNDWLLLLGQRRDWDNFAAQHTAYR
MGDDPQVRCYAVLVDTLKSGTPSAAQADAVRRTWFAQRDADDGCLTAADRMISTRMMSPN
DAWKKARLAMEANRPQTARAAVGLASPDALPIFEEINASATKFLLTRGPVVANSRRELVV
LALIKIAMADPEQAAAQMDAKWGVMLAAEERNWVWGTIGRQAASKLSPAANSYYANVTKV
SDLSDDMLGWKVRAALRAGQWKDVQQAVSAMSEESQLDPAWVYWKARALAAQGGEQRRTE
ARTLYETIAGTRGFYELLALEELGQRAVVPTRPDPLTAQEKATARSNPSLTRGLYAIAIG
LRSEGTREWNYATNLHDKGGMDDRALLAAADLACQREVWDRCINTSERTKGVIDAEQRFP
MPFHDTVLRKSQDIGLDPAYVYGLIRQESRFIMDARSGVGASGLMQVMPATAKWTANKIG
LPYSAGMIADRETNITIGTNYLKLALDDFDGSMALAAAAYNAGPGRPRSWRNGPVMDAAI
WAENVPFAETRDYVKKVLANTTNYAALISGQPQSLKARLGRVGPRNSAEPEPNKDLP
NT seq
1974 nt
NT seq
+upstream
nt +downstream
nt
atgaagtttcgaagcattctggcacccctcgtcctctcggccacggccttcacgcaaccc
accctggcacagactggcggcgacgatgtcgtggtgcagatgaagcaggcattccagcgc
ggcgacaaggggcgcctgaccgccctgctgccccaggcccggggcagcacgctcgaaccc
tgggcagcgtactgggagctcaaggcccgcctgcaggaagcgagccccgccgaagtgcag
gactttctcgcccgctatgccggcacctaccaggaagaccgcctgcgcaacgactggctg
ctgctgctcggccagcgccgcgactgggacaacttcgccgcgcagcacaccgcctaccgc
atgggcgacgacccgcaggtgcgctgctacgcggtgctggtcgacacgctcaagtcgggc
acgcccagtgctgcccaggcggacgcggtgcgccgcacctggttcgcgcagcgcgacgcc
gacgatggctgcctcaccgccgccgaccgcatgatttccacgcgaatgatgtcgcccaac
gacgcctggaaaaaggcgcgcctcgcgatggaagccaaccgcccgcagaccgcacgcgcc
gccgtcggcctcgcctcacccgatgcgctgccgatcttcgaagaaatcaacgcgagcgcg
acgaagttcctgctgacgcgcggcccggtcgtcgccaactcgcgccgcgaactcgtggtg
ctggcgctcatcaagatcgcgatggccgaccccgaacaggccgccgcgcagatggacgcc
aagtggggcgtcatgctcgcggccgaggagcgcaactgggtctggggcacgatcggccgg
caggccgcctccaagctctcgccggccgccaacagctactacgcgaacgtcacgaaggtc
agcgacctgtccgacgacatgctgggctggaaggtgcgcgcagccttgcgcgccgggcaa
tggaaagacgtgcaacaagccgtgtcggccatgagcgaagagtcgcagctcgacccggcc
tgggtctactggaaagcccgcgcgctggcggcgcagggtggcgaacagcgccgcacagag
gcgcgcacgctgtacgaaaccatcgcgggcacacgcggtttctatgagctgcttgccctc
gaagagctcggccagcgcgccgtcgtgccgacgcgccccgacccgctcaccgcccaggaa
aaagccactgcgcggagcaatccgagcttgacgcgcgggctttatgcgatcgcgatcggc
ctgcgctccgaaggcacccgcgagtggaactacgccaccaacctgcacgacaagggcggc
atggacgaccgcgccctgctcgccgcggccgacctcgcctgccagcgcgaggtgtgggac
cgctgcatcaacaccagcgaacgcaccaagggcgtgatcgatgccgagcagcgcttcccg
atgccgttccacgacaccgtgctgcgcaagagccaggacatcggcctcgatccggcgtac
gtgtacggcctcatccggcaggaaagccgtttcatcatggatgcgcgttcgggcgtgggc
gcctcgggcctcatgcaggtgatgcccgcgaccgccaagtggaccgccaacaagatcggc
ctgccctactcggccggcatgatcgccgaccgcgagaccaacatcacgatcggcaccaac
tacctgaagctcgcgctcgacgacttcgacggctcgatggcactcgccgccgcggcctac
aacgccgggcccgggcgaccgcgcagctggcgcaacggcccggtcatggacgcggcgatc
tgggccgaaaacgtcccgttcgccgagacgcgcgactacgtgaagaaggtgctcgccaac
accaccaactacgcggcgctgatcagcggccagccgcagtcgctcaaggcgcgcctcggc
cgcgtcgggccgcgcaacagcgccgagcccgagcccaacaaggacctgccctga
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