Variovorax sp. PAMC 28711: AX767_15265
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Entry
AX767_15265 CDS
T04325
Name
(GenBank) fumarate reductase
KO
K00239
succinate dehydrogenase flavoprotein subunit [EC:
1.3.5.1
]
Organism
vaa
Variovorax sp. PAMC 28711
Pathway
vaa00020
Citrate cycle (TCA cycle)
vaa00190
Oxidative phosphorylation
vaa00650
Butanoate metabolism
vaa01100
Metabolic pathways
vaa01110
Biosynthesis of secondary metabolites
vaa01120
Microbial metabolism in diverse environments
vaa01200
Carbon metabolism
Module
vaa_M00149
Succinate dehydrogenase, prokaryotes
Brite
KEGG Orthology (KO) [BR:
vaa00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
AX767_15265
00650 Butanoate metabolism
AX767_15265
09102 Energy metabolism
00190 Oxidative phosphorylation
AX767_15265
Enzymes [BR:
vaa01000
]
1. Oxidoreductases
1.3 Acting on the CH-CH group of donors
1.3.5 With a quinone or related compound as acceptor
1.3.5.1 succinate dehydrogenase
AX767_15265
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Gene cluster
GFIT
Motif
Pfam:
FAD_binding_2
Succ_DH_flav_C
DAO
Thi4
Pyr_redox_2
FAD_binding_3
HI0933_like
GIDA
Pyr_redox_3
FAD_oxidored
NAD_binding_7
ThiF
NAD_binding_8
Motif
Other DBs
NCBI-ProteinID:
AMM25566
UniProt:
A0A126ZF28
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Position
complement(3148943..3150751)
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AA seq
602 aa
AA seq
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MTYTKDQITKRKFDVVIVGAGGSGMRASLQLARAGLNVAVLSKVFPTRSHTVAAQGGIGA
SLGNMSEDNWHYHFYDTIKGSDWLGDQDAIEYMCREAPKVVYELEHFGMPFDRNPDGTIY
QRPFGGHTANYGEKPVQRACAAADRTGHAMLHTLYQKNVEARTQFFVEWMALDLIRDDEG
DVVGVTALEMETGDLHILQAKTVLLATGGAGRIFQASTNAFINTGDGLGMAARSGIPLQD
MEFWQFHPTGVAGAGVLLTEGCRGEGAILLNSNGERFMERYAPTMKDLAPRDFVSRSMDQ
EIKEGRGCGPNKDYIHMKLDHLGAETIHKRLPSVYEIGINFANVDVTKEPIPVVPTIHYQ
MGGIPTNINGQVVIQKGEENSAVVNGLYAVGECSCVSVHGANRLGTNSLLDLLVFGKAAG
NHIVEFNDKLKEHKALPADAADRSLERLNQLEDSTSGEYAQDVANDIRTVMQQHAAVFRK
QASMDEGVAKIAAMRERVNAITLKDKSKVFNTARIEALEVDNLIEVAQATMVSAAARTEC
RGAHTVEDYERPADDPVAPLGRDDAKWMKHTLWYSEANRLSYKPVQLKPLTVASVPPKVR
TF
NT seq
1809 nt
NT seq
+upstream
nt +downstream
nt
atgacttacacaaaagaccaaatcaccaagcgcaagttcgacgtcgtcatcgtcggcgcc
ggcggctcgggcatgcgtgcctcgctgcaactggcgcgcgccggcctcaacgtggccgtg
ctgtccaaggtgtttccgacgcgctcgcacacggtggccgcgcaaggcggcatcggcgcc
tcgctcggcaacatgagcgaagacaactggcactaccacttctacgacacgatcaagggt
tccgactggctcggcgaccaggatgcgatcgagtacatgtgccgtgaagcacccaaggtg
gtgtacgagctcgaacatttcggcatgccgttcgaccgcaaccccgacggcacgatctac
cagcgtccgttcggcggccacaccgccaactacggcgaaaagccggtgcagcgcgcttgc
gccgcagccgaccgcaccggtcacgcgatgctgcacacgctctaccagaagaacgtcgag
gctcgcacacagttcttcgtcgaatggatggcactcgacctgatccgcgacgacgaaggc
gacgtggtcggcgtgaccgcgctcgagatggaaaccggcgacctgcacatcctgcaggcc
aagaccgtgctgctggccaccggcggcgccgggcggatcttccaggcttcgaccaatgcc
ttcatcaacaccggcgacggcctggggatggcggcgcgttcgggcatcccgctgcaggac
atggagttctggcagttccacccgaccggcgtggccggcgcgggcgtgctgctgaccgaa
ggttgccgcggcgaaggcgccatcctgctcaacagcaacggcgagcgcttcatggagcgc
tatgcgccgaccatgaaggacctggcaccgcgcgacttcgtgtcgcgctcgatggaccag
gagatcaaggaaggtcgcggctgcggtcccaacaaggactacatccacatgaagctcgac
cacttgggcgccgagacgatccacaagcgcctgccgtcggtgtacgagatcggcatcaac
ttcgcgaacgtcgacgtcacgaaggaaccgatcccggtcgtgccgaccatccattaccag
atgggtggcatcccgaccaacatcaacggccaggtcgtcatccagaagggtgaagagaac
agcgctgtggtcaacggtctgtatgcggtcggcgaatgctcctgcgtgagcgtgcatggc
gcgaaccgcctgggcaccaactcgctgctcgacctgctggtgttcggcaaggcggccggc
aaccacatcgtcgaattcaacgacaagctcaaagagcacaaggcactgccggccgacgcg
gccgaccgctcgctcgagcgtctgaaccagcttgaagactcgacctcgggcgaatacgcg
caggacgtggccaacgacatccgtaccgtcatgcagcagcacgccgccgtgttccgaaag
caagcgtcgatggacgaaggcgtggccaagatcgccgcgatgcgcgagcgcgtcaacgcg
atcacgctgaaagacaagtccaaggtgttcaacaccgcgcgcatcgaagcgctcgaagtc
gacaacctgatcgaagtggcgcaggccacgatggtgtcggcggcggctcgcacggaatgc
cgcggcgcgcacacggtcgaagactacgagcgcccggccgatgatccggtcgcaccactc
ggccgcgacgacgccaaatggatgaagcacacgctttggtacagcgaagcgaaccgcctg
tcttacaagccggtccagctcaagccgctgactgtcgcctccgtgccgcccaaagtccgc
acgttctga
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