KEGG   Vibrio alginolyticus: N646_1857
Entry
N646_1857         CDS       T02840                                 
Name
(GenBank) hypothetical protein
  KO
K10917  PadR family transcriptional regulator, regulatory protein AphA
Organism
vag  Vibrio alginolyticus
Pathway
vag02024  Quorum sensing
vag05111  Biofilm formation - Vibrio cholerae
Brite
KEGG Orthology (KO) [BR:vag00001]
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    N646_1857
   05111 Biofilm formation - Vibrio cholerae
    N646_1857
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:vag03000]
    N646_1857
Transcription factors [BR:vag03000]
 Prokaryotic type
  Helix-turn-helix
   PadR family
    N646_1857
SSDB
Motif
Pfam: Vir_act_alpha_C PadR HTH_34
Other DBs
NCBI-ProteinID: AGV17684
UniProt: A0A2I3CBK2
LinkDB
Position
1:2006018..2006557
AA seq 179 aa
MSLPHVILTVLSTRDATGYDITKEFSASIGYFWKASHQQVYRELNKMAEKELVTCVLEPQ
EGKPDRKVYSITDAGRSALGEWFDQPTAHPTVRDEFSAKLMACAVQPAAPFRDQLAELVE
ESRKLVSHYKEIEAAYYATPSTLDKQARLERLTLRRNLLLRETWITWAEEVLTELEVIG
NT seq 540 nt   +upstreamnt  +downstreamnt
atgtcattaccacacgtaatcttaactgttcttagcactcgcgacgcaaccggttacgat
atcactaaagaattctctgctagcatcggttacttctggaaagcaagccaccaacaggtg
taccgtgaactcaacaaaatggctgagaaagaactggttacttgcgtattagaaccccaa
gaaggcaaaccagaccgcaaggtttactccattacagacgctggtcgcagcgctttagga
gagtggtttgatcaaccaactgcacacccaacagttcgtgatgagttttcagcgaaattg
atggcatgtgccgttcaacctgcggctccattccgtgaccaactcgccgagctagttgaa
gagtctcgcaaactggtttctcactacaaagaaattgaagcggcttactacgcaacgccg
tcaactttagataaacaagctcgcctagaacgtctaacgcttcgccgtaaccttctgtta
cgtgaaacttggatcacttgggcagaagaagttctaactgaacttgaagtgattggttaa

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