Vibrio alginolyticus: N646_1857
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Entry
N646_1857 CDS
T02840
Name
(GenBank) hypothetical protein
KO
K10917
PadR family transcriptional regulator, regulatory protein AphA
Organism
vag
Vibrio alginolyticus
Pathway
vag02024
Quorum sensing
vag05111
Biofilm formation - Vibrio cholerae
Brite
KEGG Orthology (KO) [BR:
vag00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
N646_1857
05111 Biofilm formation - Vibrio cholerae
N646_1857
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
vag03000
]
N646_1857
Transcription factors [BR:
vag03000
]
Prokaryotic type
Helix-turn-helix
PadR family
N646_1857
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GFIT
Motif
Pfam:
Vir_act_alpha_C
PadR
HTH_34
Motif
Other DBs
NCBI-ProteinID:
AGV17684
UniProt:
A0A2I3CBK2
LinkDB
All DBs
Position
1:2006018..2006557
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AA seq
179 aa
AA seq
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MSLPHVILTVLSTRDATGYDITKEFSASIGYFWKASHQQVYRELNKMAEKELVTCVLEPQ
EGKPDRKVYSITDAGRSALGEWFDQPTAHPTVRDEFSAKLMACAVQPAAPFRDQLAELVE
ESRKLVSHYKEIEAAYYATPSTLDKQARLERLTLRRNLLLRETWITWAEEVLTELEVIG
NT seq
540 nt
NT seq
+upstream
nt +downstream
nt
atgtcattaccacacgtaatcttaactgttcttagcactcgcgacgcaaccggttacgat
atcactaaagaattctctgctagcatcggttacttctggaaagcaagccaccaacaggtg
taccgtgaactcaacaaaatggctgagaaagaactggttacttgcgtattagaaccccaa
gaaggcaaaccagaccgcaaggtttactccattacagacgctggtcgcagcgctttagga
gagtggtttgatcaaccaactgcacacccaacagttcgtgatgagttttcagcgaaattg
atggcatgtgccgttcaacctgcggctccattccgtgaccaactcgccgagctagttgaa
gagtctcgcaaactggtttctcactacaaagaaattgaagcggcttactacgcaacgccg
tcaactttagataaacaagctcgcctagaacgtctaacgcttcgccgtaaccttctgtta
cgtgaaacttggatcacttgggcagaagaagttctaactgaacttgaagtgattggttaa
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