Vibrio alginolyticus: N646_4392
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Entry
N646_4392 CDS
T02840
Name
(GenBank) putative exonuclease SbcC
KO
K03546
DNA repair protein SbcC/Rad50
Organism
vag
Vibrio alginolyticus
Brite
KEGG Orthology (KO) [BR:
vag00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
vag03400
]
N646_4392
DNA repair and recombination proteins [BR:
vag03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
N646_4392
Archaeal homologous recombinant proteins
N646_4392
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SbcC_Walker_B
SMC_N
AAA_29
AAA_21
AAA_5
zf-NADH-PPase
Motif
Other DBs
NCBI-ProteinID:
AGV20201
UniProt:
A0A2I3CRJ9
LinkDB
All DBs
Position
2:complement(1431352..1434408)
Genome browser
AA seq
1018 aa
AA seq
DB search
MKPIKLTMQAFGPFAKTEIIHFEKLGSNPLFLINGPTGSGKTSILDAICFALYGETTGNE
RQGIQMRCDLSAQDLPTEVVLEFSLHGKQYRVVRSPEQEAPKARGEGMTIKKHTAALYEL
GETETLITSKTTQVKTEVSNIIGLNETQFRQVMVLPQGKFRELLLASSKEREEIFGQLFQ
TDIYKKIEYALKDKASAISKAKGEFDNQIRGALQVAEASSEQELLQQLEQVTKQLESDKK
NEQAALDKLNTAKSELQKAETLNGEFSKREQAESALKLHLEHADSIKARQQQLENAKNAN
KIELPYISLQNAKAQTQELRQKIVALEESLEKANVVAREQENLQQSAKEAAAKVPQLTQL
QYQLESMKNKLVEKDNLESKITAGYQQKQQFEATLKQYIELKDKLTLQAQQGQKELEKAR
VDVALIGSIDAEIKQKQRLLQDLQKLHDLTLELSKLNALTVGKQQSLHEASQRYMQRQQA
ADTIELKWHNAQAAVLAQRLKAGEACPVCGSETHPNPATFVEEAVTKEQVQAARAKEREA
QTLLNQLSNQLEQHNVVISQYQNQCNQLKEELGEYATSEISTVQNDLQAINAQLLRLQAI
DIEKLEKNVEQLNQRCVVGENKIHELQNKMAANESTVKANQEQLAQLQASIDPKYSSADL
LEREILLTKEQILSLNTGLEKAQTALQQAILEKSNAESHLATNKQWLSESEQKLSQAELA
WNEALQASKFEDESHYLSSRVGDDELQAWQQEIDSFKQAQTKLEQTLHDLNHALKDLERP
NLELFNDRLTTLQAQYIEVRNQLDTTRSIFERLEKVRKDIAVLHEKNSKLEEEYKVFGTL
YDVASGKTGSRVSLHRFVLGVLLDDVLIQASQRLSLMSKGRYILARKTEGFKGAAGRGLD
LMVEDGYTGKTRDVATLSGGESFMAALALALGLSDVVQSYSGGIRLDTLFIDEGFGSLDP
ESLDLAIQTLVDLQQTGRMIGVISHVSELKEQMAQRIDVEPSRLGSTVSIKSQCRFAV
NT seq
3057 nt
NT seq
+upstream
nt +downstream
nt
atgaaaccaattaaactaaccatgcaagcctttggtccgtttgcaaaaactgaaatcatt
cattttgagaagcttggcagtaaccctctatttttgattaatggtcctacaggttccggt
aaaacgtcgatcttagatgccatttgcttcgccctttatggtgaaaccacaggtaatgag
cgacaaggtattcagatgcggtgtgacttatccgcgcaagacttaccaaccgaagtagtt
ctcgaattttcgttacacggcaaacaataccgagttgttcgatcccctgagcaggaagcg
cccaaggcccgtggtgaagggatgacgattaaaaagcacactgcggctctttatgaactc
ggtgagactgaaacgcttatcaccagcaagacgactcaggttaaaactgaagttagcaat
attattggcttgaatgaaactcaatttcgtcaagttatggtgttgcctcaaggaaaattc
cgagaactgttgcttgctagctctaaagagcgtgaagaaatttttggccagctctttcaa
actgacatatataaaaaaattgagtacgcgctcaaagataaagcgagtgcaattagtaaa
gcgaaaggcgaatttgataatcaaattcgaggtgctttacaagttgcagaagcgagttct
gaacaagaactattacaacaactggaacaagtaactaagcaattagagtctgataaaaag
aatgagcaagcagcgttagataagctcaatactgctaaatctgaattgcaaaaagcggaa
accttgaatggagagttttcgaaacgagagcaagcagaaagcgcactcaagctgcatcta
gaacacgcagattcgataaaagctcgtcaacagcaattagaaaacgctaaaaatgccaat
aagatagagttgccctacatctcattacaaaatgcaaaagctcaaacgcaagagcttagg
caaaaaatcgtagctttggaagagagtctcgaaaaagctaatgtcgttgcgagagaacaa
gaaaacttgcagcaaagtgcaaaagaggcagcggcaaaggtcccgcagttaacgcaactg
cagtatcagcttgaaagtatgaaaaacaagttggtcgagaaagacaatttggaaagtaaa
ataacggcgggttatcaacaaaaacaacaatttgaagcaacgttaaaacagtacatagaa
ctaaaagataagttaacgttacaggcccagcagggacagaaggagctagagaaagcacga
gttgatgttgcgcttattggcagcatcgatgcggaaataaaacaaaaacaacggctgtta
caggatctacaaaagctgcatgatcttactttagagctctctaaactcaatgcgctaact
gtaggcaagcagcagtcactacacgaagccagtcagcgctatatgcagcgtcaacaagcc
gctgatacgatagagcttaagtggcacaacgctcaagcggcagtattagcgcagcgacta
aaagcaggtgaagcatgcccggtgtgtggtagcgaaacgcatcctaaccccgcaacgttt
gttgaagaagccgttacaaaagagcaagttcaggcggctagagctaaagagcgagaagct
caaaccttgttgaaccaactaagcaatcagctagaacaacataacgttgtcattagtcag
tatcagaatcagtgtaaccagttgaaagaggagttgggtgagtatgctacatctgagatc
tcgacggttcaaaatgatttgcaagcgatcaatgctcaactcctacgtctacaagctatt
gatattgaaaagctagaaaagaacgttgaacagcttaatcaacgctgcgtcgtgggtgaa
aataaaattcatgagctgcagaataaaatggcggcaaatgaatcaaccgttaaagcgaac
caagaacaattggctcaattacaagcttctattgacccaaaatacagttccgctgacttg
cttgaacgtgaaattttgctgacaaaagagcaaattctgagtttgaacacaggcttagaa
aaggcgcaaaccgctttgcagcaagcgatattggagaaatcaaatgcggaaagtcactta
gcgacgaacaagcagtggttatctgagtcagagcaaaaacttagccaagcagaattagcg
tggaatgaggcactacaggcgagtaaatttgaggatgaaagccattatctaagtagtcga
gtgggagatgatgaacttcaagcctggcagcaagaaatagacagcttcaaacaggcacaa
accaagcttgagcaaacactacatgatttaaatcatgcattgaaagatcttgaaaggcct
aatttagagttgtttaatgacaggttaaccactctgcaggcgcaatatattgaagtaagg
aatcaacttgataccacacgctcaatatttgaacgtcttgaaaaggttcgtaaagatatt
gccgtgttgcatgagaaaaatagtaagttagaagaagaatacaaagtctttggtacgttg
tacgacgttgctagtggtaaaacaggcagcagggttagcctacatcgctttgttcttggt
gtactgttggatgatgtgctgattcaggcctcccaacgtttaagccttatgagtaaaggg
cgctatattcttgctcgaaaaacagagggcttcaaaggtgctgcgggtcgcggcttagat
ttaatggttgaagatggctacacaggaaaaacgcgtgatgttgcgacactttccggcggt
gaatcatttatggcagcgcttgctctggcacttggtttgtcggatgttgtgcaatcctat
agtggcggtattcgtttagacactttatttattgatgagggcttcggtagtttagaccca
gagtctttagatcttgctattcaaacgctagtggacctgcaacagactgggcgcatgatc
ggtgttatttctcacgtttctgagttgaaagaacaaatggcgcagaggattgatgtagaa
ccatcaagacttggttcaacggtgtcgattaaatctcaatgtcgcttcgctgtctaa
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integrated database retrieval system
