Vibrio anguillarum 775: VAA_02459
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Entry
VAA_02459 CDS
T01536
Name
(GenBank) Formamidopyrimidine-DNA glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
van
Vibrio anguillarum 775
Pathway
van03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
van00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
VAA_02459
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
van03400
]
VAA_02459
Enzymes [BR:
van01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
VAA_02459
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
VAA_02459
DNA repair and recombination proteins [BR:
van03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
VAA_02459
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
Zn_Tnp_IS1595
zinc-ribbons_6
Motif
Other DBs
NCBI-ProteinID:
AEH31974
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All DBs
Position
I:410362..411171
Genome browser
AA seq
269 aa
AA seq
DB search
MPELPEVEVSKMGISPHLVGQTIQQLTFRTPKLRWAIPQELKQLEGQVIRNIARRAKYLL
IETDIGSAIVHLGMSGSLRVLECDFPAGKHDHVDLRLTNGKVLRYHDPRRFGAWLWCEQG
ASHSVLSNIGPEPLTDDFDADYIVQKANNKRIAVKQFIMENKVVVGVGNIYASESLFNAR
ILPTRPAHSLTLTEWNCLVREIKSVLATAIQQGGTTLKDFAQADGKPGYFAQELNVYGKA
QQPCPACGQAIEALKIGQRNTFFCSACQK
NT seq
810 nt
NT seq
+upstream
nt +downstream
nt
atgcctgagttacccgaagttgaagtaagtaaaatggggattagcccgcatctagttgga
caaacgatccagcaactgacatttcgcacgccaaaattacgttgggccatccctcaagag
ctgaaacagttagaagggcaagtgatccgcaatattgcccgccgggccaaatatttattg
atagagaccgatattggcagtgcgattgttcacttgggaatgtcaggttcattgcgagta
ttggagtgtgattttccggcaggtaagcatgatcacgttgatctgcgattaaccaatggc
aaggtactgcgctaccacgatcctcgtcgatttggcgcttggctatggtgcgaacaagga
gcaagccactcggtgttgagtaatatcggtcctgagccattaaccgatgattttgatgca
gattatattgtgcaaaaagcgaacaataaacgtatcgctgttaagcaatttattatggaa
aataaagtagtggttggcgtaggcaatatctacgcgagtgaatcactgtttaatgcgcga
attctccccactcggcccgctcattcgctgacactgactgagtggaattgcctcgtgcga
gaaattaaatcagtcttagcaacggcgattcaacaaggtggcacaaccttaaaagatttt
gcacaagcggatggcaaaccgggctattttgctcaagagcttaatgtgtatggcaaagcg
cagcagccttgcccagcgtgtgggcaagcgattgaagcgctgaaaattggtcagcgtaac
acctttttctgctctgcttgccaaaaataa
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