KEGG   Variovorax paradoxus S110: Vapar_0549
Entry
Vapar_0549        CDS       T00916                                 
Name
(GenBank) type VI secretion protein, EvpB/VC_A0108 family
  KO
K11900  type VI secretion system protein ImpC
Organism
vap  Variovorax paradoxus S110
Brite
KEGG Orthology (KO) [BR:vap00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:vap02044]
    Vapar_0549
Secretion system [BR:vap02044]
 Type VI secretion system
  Imp/Vas secretion system core components
   Vapar_0549
SSDB
Motif
Pfam: VipB VipB_2
Other DBs
NCBI-ProteinID: ACS17212
UniProt: C5CKB4
LinkDB
Position
1:complement(608618..610111)
AA seq 497 aa
MAEALEQSALKDVAYAGSDFSSLLQKEFKPRSDEAKSAVEAAVLTLAQQALSNSTVIGKD
VTKSIQSMIAAIDAKLTDQVNKIIHHPDYQKLESAWRGLHYMVNNTETDEHLKIRVMDIS
KTDLAKSLKKFKGAAWDQSPMFKKIYEQEYGQFGGEPFGALVGDYHFDQSPPDIELLGEM
SKIAASAHAPFITGASPNLMQMESWQELANPRDLTKIFLTPEYAGWRSLRDSDDAKYLGL
CMPRFLARTPYGANTNPVEEFDFEEDTVGADHSKYAWANAAYAMATNINRSYKLYGWGSR
IRGIESGGAVENLPLHTFPSDDGGVDQKCPTEIAISDRREAELSKAGLLSLIHRKNSDFA
AFIGAQSLHKPAEYDDPDATANANLAARLPYLFACNRFAHYLKCIVRDKVGSFKERDDMQ
RWLNKWIMNYVDGDPVNSSEETKARKPLAAAEVVVEEVEGNPGYYTSKFFLRPHYQLEGL
TVSLRLVSKLPSAKGGK
NT seq 1494 nt   +upstreamnt  +downstreamnt
atggccgaagcactcgagcagagcgcactcaaggatgtcgcctatgcgggcagcgatttt
tcgtcgctcctgcaaaaggaattcaagccgcgcagcgacgaagccaagagcgccgtcgaa
gccgcggtgctcacgctcgcgcagcaggcgctgagcaacagtaccgtcatcggcaaggac
gtgaccaagtcgatccagtcgatgatcgccgcgatcgacgccaagctgaccgaccaggtc
aacaagatcatccaccaccccgactaccagaagctcgagagtgcgtggcgcggcctgcac
tacatggtgaacaacaccgagaccgacgagcacctgaagatccgggtgatggacatctcg
aagacggaccttgccaagagcctgaagaagttcaagggcgcggcctgggaccagagcccg
atgttcaagaagatctacgagcaggaatacggccagttcggcggcgagcccttcggcgcg
ctggtgggcgactaccacttcgaccagagcccgcccgacatcgagctgctgggcgagatg
tccaagatcgccgcctcggcgcatgcgcccttcatcaccggcgcgagccccaacctgatg
cagatggaatcgtggcaggagctcgccaacccgcgcgacctgaccaagatctttctcacg
cccgagtacgccggctggcggtcgctgcgcgactccgacgacgccaagtacctgggcctg
tgcatgccgcgcttcctggcgcgcacgccctacggcgccaacaccaatccggtggaggag
ttcgacttcgaggaagacaccgtcggcgccgaccacagcaagtacgcctgggccaacgca
gcctatgcgatggccaccaacatcaaccgctcctacaagctctacggctggggttcgcgc
atccgcggcatcgaatcgggcggcgcggtggagaacctgccgctgcacaccttcccgagc
gacgacggcggcgtggaccagaagtgcccgaccgagatcgccatcagcgaccggcgcgaa
gccgagctctcgaaggccggcctgctttcgctgatccaccgcaagaactccgacttcgcg
gccttcatcggtgcgcagtcgctgcacaagccggccgagtacgacgacccggacgccacg
gccaacgccaacctggcggcgcgcctgccctacctctttgcctgcaaccgctttgcgcac
tacctgaagtgcatcgtgcgcgacaaggtcggcagcttcaaggagcgcgacgacatgcag
cgctggctcaacaagtggatcatgaactacgtggacggcgaccccgtcaactcctccgaa
gagaccaaggccaggaagcccctggccgcggccgaggtggtggtggaagaggtcgagggc
aaccccggctactacacctccaagttcttcctgcgcccgcactaccagctcgaaggcctc
acggtgtcgctgcggctggtgtcgaagctgccctcggccaagggcggcaagtag

DBGET integrated database retrieval system