KEGG   Variovorax paradoxus S110: Vapar_0930
Entry
Vapar_0930        CDS       T00916                                 
Name
(GenBank) crossover junction endodeoxyribonuclease RuvC
  KO
K01159  crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10]
Organism
vap  Variovorax paradoxus S110
Pathway
vap03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:vap00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    Vapar_0930
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:vap03400]
    Vapar_0930
Enzymes [BR:vap01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.21  Endodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.21.10  crossover junction endodeoxyribonuclease
     Vapar_0930
DNA repair and recombination proteins [BR:vap03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecBC pathway proteins
     Vapar_0930
    RecFOR pathway proteins
     Vapar_0930
SSDB
Motif
Pfam: RuvC DUF460 DUF4423
Other DBs
NCBI-ProteinID: ACS17581
UniProt: C5CNG5
LinkDB
Position
1:complement(1023808..1024356)
AA seq 182 aa
MRILGIDPGLLTTGFGVVDSDGHALSYVASGTISTRHLGSGNLPARLKVLFDGIAEIAAR
YQPDASAVEIIFVNVNPQSTLLLGQARGACVTSLVNSNLSVAEYTALQMKKAVAGHGQAA
KAQVQEMVKRLLDLPGLPGADAADALGIAITHAQVGRSMARLAEAAELSKTHAGTYRQGR
SR
NT seq 549 nt   +upstreamnt  +downstreamnt
atgcgcattctcggcatcgaccccggcctcctgaccaccggtttcggcgtggtcgattcg
gacggccatgcgctgagctacgtggccagcggcaccatcagcacgcgccacctgggcagc
ggcaacctgccggcgcggctcaaggtgctgttcgacggcatcgcggaaatcgccgcgcgc
taccagcccgatgcctcggcggtcgagatcatcttcgtcaacgtcaatccgcagtcgacg
ctgctgctgggccaggcgcgcggcgcctgcgtgacctcgctggtcaacagcaatctcagc
gtggccgaatacaccgcgctgcagatgaagaaggcagtggcgggccacggccaggccgcc
aaggcgcaggtgcaggagatggtgaagcggctgctcgacctgccgggcctgccgggcgcc
gatgccgccgacgcgctgggcattgccatcacgcatgcgcaggtcggccggtcgatggcg
cggctggccgaggcggccgagctgtcgaagacgcacgccggcacctaccggcagggacgc
tcgcgctga

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