Variovorax paradoxus S110: Vapar_0930
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Entry
Vapar_0930 CDS
T00916
Name
(GenBank) crossover junction endodeoxyribonuclease RuvC
KO
K01159
crossover junction endodeoxyribonuclease RuvC [EC:
3.1.21.10
]
Organism
vap
Variovorax paradoxus S110
Pathway
vap03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
vap00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
Vapar_0930
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
vap03400
]
Vapar_0930
Enzymes [BR:
vap01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.21 Endodeoxyribonucleases producing 5'-phosphomonoesters
3.1.21.10 crossover junction endodeoxyribonuclease
Vapar_0930
DNA repair and recombination proteins [BR:
vap03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
Vapar_0930
RecFOR pathway proteins
Vapar_0930
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RuvC
DUF460
DUF4423
Motif
Other DBs
NCBI-ProteinID:
ACS17581
UniProt:
C5CNG5
LinkDB
All DBs
Position
1:complement(1023808..1024356)
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AA seq
182 aa
AA seq
DB search
MRILGIDPGLLTTGFGVVDSDGHALSYVASGTISTRHLGSGNLPARLKVLFDGIAEIAAR
YQPDASAVEIIFVNVNPQSTLLLGQARGACVTSLVNSNLSVAEYTALQMKKAVAGHGQAA
KAQVQEMVKRLLDLPGLPGADAADALGIAITHAQVGRSMARLAEAAELSKTHAGTYRQGR
SR
NT seq
549 nt
NT seq
+upstream
nt +downstream
nt
atgcgcattctcggcatcgaccccggcctcctgaccaccggtttcggcgtggtcgattcg
gacggccatgcgctgagctacgtggccagcggcaccatcagcacgcgccacctgggcagc
ggcaacctgccggcgcggctcaaggtgctgttcgacggcatcgcggaaatcgccgcgcgc
taccagcccgatgcctcggcggtcgagatcatcttcgtcaacgtcaatccgcagtcgacg
ctgctgctgggccaggcgcgcggcgcctgcgtgacctcgctggtcaacagcaatctcagc
gtggccgaatacaccgcgctgcagatgaagaaggcagtggcgggccacggccaggccgcc
aaggcgcaggtgcaggagatggtgaagcggctgctcgacctgccgggcctgccgggcgcc
gatgccgccgacgcgctgggcattgccatcacgcatgcgcaggtcggccggtcgatggcg
cggctggccgaggcggccgagctgtcgaagacgcacgccggcacctaccggcagggacgc
tcgcgctga
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